Wall clock time and date at job start Sun Mar 7 2021 00:25:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.53005 * 109.46939 * 2 1 4 4 C 1.52995 * 109.47373 * 240.00058 * 2 1 3 5 5 O 1.45201 * 109.47159 * 119.99860 * 2 1 3 6 6 C 1.34626 * 117.00108 * 60.00650 * 5 2 1 7 7 O 1.21513 * 119.99942 * 359.97438 * 6 5 2 8 8 N 1.34776 * 120.00021 * 180.02562 * 6 5 2 9 9 C 1.46506 * 119.99831 * 179.97438 * 8 6 5 10 10 H 1.08997 * 112.85420 * 23.80069 * 9 8 6 11 11 C 1.53781 * 113.61405 * 154.99784 * 9 8 6 12 12 C 1.53786 * 87.17350 * 140.02258 * 11 9 8 13 13 H 1.08993 * 113.61491 * 89.15923 * 12 11 9 14 14 N 1.46501 * 113.61366 * 220.06429 * 12 11 9 15 15 C 1.34773 * 120.00122 * 204.99908 * 14 12 11 16 16 O 1.21575 * 119.99549 * 359.97438 * 15 14 12 17 17 C 1.47686 * 120.00253 * 179.97438 * 15 14 12 18 18 C 1.39830 * 120.16832 * 179.72154 * 17 15 14 19 19 F 1.35106 * 120.10868 * 0.02562 * 18 17 15 20 20 C 1.38314 * 119.78022 * 179.79375 * 18 17 15 21 21 C 1.38199 * 120.11905 * 0.48294 * 20 18 17 22 22 C 1.38465 * 120.33884 * 359.74818 * 21 20 18 23 23 C 1.50701 * 119.89320 * 179.97438 * 22 21 20 24 24 O 1.42898 * 109.47274 * 245.02309 * 23 22 21 25 25 Si 1.86307 * 109.46968 * 5.02050 * 23 22 21 26 26 C 1.37851 * 120.21788 * 0.02562 * 22 21 20 27 27 C 1.53782 * 113.68817 * 252.53351 * 9 8 6 28 28 H 1.09005 * 109.47550 * 299.99843 * 1 2 3 29 29 H 1.08996 * 109.47695 * 60.00060 * 1 2 3 30 30 H 1.09002 * 109.47152 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47457 * 179.97438 * 3 2 1 32 32 H 1.09004 * 109.47113 * 300.00297 * 3 2 1 33 33 H 1.09005 * 109.46871 * 59.99741 * 3 2 1 34 34 H 1.09002 * 109.46975 * 300.00100 * 4 2 1 35 35 H 1.09004 * 109.46806 * 59.99626 * 4 2 1 36 36 H 1.09005 * 109.47447 * 179.97438 * 4 2 1 37 37 H 0.96990 * 120.00286 * 359.97438 * 8 6 5 38 38 H 1.09002 * 113.61445 * 254.61257 * 11 9 8 39 39 H 1.09002 * 113.61408 * 25.42988 * 11 9 8 40 40 H 0.97002 * 119.99797 * 24.99368 * 14 12 11 41 41 H 1.07997 * 119.94328 * 180.23487 * 20 18 17 42 42 H 1.08000 * 119.83776 * 179.72313 * 21 20 18 43 43 H 1.09000 * 109.47180 * 125.02143 * 23 22 21 44 44 H 0.96697 * 114.00176 * 59.99669 * 24 23 22 45 45 H 1.48493 * 109.99549 * 179.97438 * 25 23 22 46 46 H 1.48500 * 109.99871 * 301.31978 * 25 23 22 47 47 H 1.08001 * 120.06055 * 179.97438 * 26 22 21 48 48 H 1.08997 * 113.61668 * 334.55345 * 27 9 8 49 49 H 1.08998 * 113.61674 * 105.37854 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6523 -1.9722 1.3383 7 8 0.9510 -2.5094 0.5040 8 7 2.0673 -2.6653 2.4172 9 6 1.6733 -4.0665 2.5836 10 1 1.4210 -4.5503 1.6401 11 6 2.6462 -4.8809 3.4526 12 6 1.4100 -5.5558 4.0700 13 1 1.0856 -6.4474 3.5336 14 7 1.5176 -5.7676 5.5157 15 6 0.8070 -6.7477 6.1079 16 8 0.0762 -7.4557 5.4425 17 6 0.9159 -6.9616 7.5651 18 6 0.1757 -7.9737 8.1840 19 9 -0.6420 -8.7605 7.4508 20 6 0.2871 -8.1698 9.5487 21 6 1.1195 -7.3617 10.2997 22 6 1.8511 -6.3550 9.6927 23 6 2.7553 -5.4793 10.5214 24 8 2.2695 -4.1357 10.4980 25 14 2.7812 -6.0998 12.2779 26 6 1.7542 -6.1502 8.3329 27 6 0.6262 -4.2868 3.6881 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1299 1.4427 0.0005 32 1 1.6765 1.9564 -0.8900 33 1 1.6765 1.9564 0.8900 34 1 1.6766 -1.7489 -1.2492 35 1 1.6766 -0.2073 -2.1392 36 1 3.1300 -0.7208 -1.2494 37 1 2.6268 -2.2364 3.0834 38 1 3.2761 -5.5627 2.8811 39 1 3.2119 -4.2747 4.1602 40 1 2.1005 -5.2025 6.0465 41 1 -0.2805 -8.9531 10.0288 42 1 1.1997 -7.5160 11.3656 43 1 3.7647 -5.5080 10.1110 44 1 1.3743 -4.0349 10.8494 45 1 3.6699 -5.2450 13.1053 46 1 1.4059 -6.0957 12.8383 47 1 2.3256 -5.3640 7.8621 48 1 0.6385 -3.5185 4.4611 49 1 -0.3750 -4.4876 3.3068 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941094_12335834.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:25:39 Heat of formation + Delta-G solvation = -135.752465 kcal Electronic energy + Delta-G solvation = -32923.290085 eV Core-core repulsion = 28153.665337 eV Total energy + Delta-G solvation = -4769.624748 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.167 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -50.01764 -41.99402 -41.47057 -40.43747 -39.49760 -37.96116 -37.55751 -35.66164 -35.01195 -33.74717 -32.43992 -32.14432 -28.39488 -28.32293 -26.84065 -26.66694 -26.50973 -25.06436 -23.54438 -22.59774 -21.77160 -21.41005 -20.82574 -19.38444 -19.03499 -18.45407 -18.35121 -17.98225 -17.37812 -17.21872 -17.08282 -16.93769 -16.37129 -16.21071 -16.12455 -15.88009 -15.71238 -15.57024 -15.39210 -15.26919 -14.74172 -14.53879 -14.40767 -14.34069 -13.97742 -13.57032 -13.56305 -13.39006 -13.22727 -13.14953 -12.95081 -12.89010 -12.87081 -12.62317 -12.50342 -12.42599 -12.27566 -12.22045 -12.04140 -11.71039 -11.42271 -11.21600 -11.14253 -10.61879 -10.43180 -10.26887 -10.07650 -9.84013 -4.87226 -0.50312 -0.02740 1.10409 1.32229 1.57971 1.63134 1.70374 1.95641 2.02399 2.46433 3.04897 3.11955 3.28052 3.34997 3.43059 3.49376 3.53856 3.63204 3.71809 3.74832 3.78107 3.83163 3.92046 4.00232 4.10710 4.38648 4.47442 4.54401 4.55947 4.58645 4.61081 4.63878 4.70584 4.74021 4.78540 4.80932 4.81742 4.84348 4.85498 4.92512 4.95223 4.96614 5.09938 5.14271 5.23255 5.24562 5.32196 5.45739 5.56577 5.59738 6.33171 6.38362 6.50712 7.03604 7.31308 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.368 6.368 6 C 0.643 3.357 7 O -0.595 6.595 8 N -0.685 5.685 9 C 0.141 3.859 10 H 0.106 0.894 11 C -0.128 4.128 12 C 0.123 3.877 13 H 0.103 0.897 14 N -0.694 5.694 15 C 0.555 3.445 16 O -0.572 6.572 17 C -0.189 4.189 18 C 0.133 3.867 19 F -0.138 7.138 20 C -0.153 4.153 21 C -0.053 4.053 22 C -0.131 4.131 23 C -0.073 4.073 24 O -0.544 6.544 25 Si 0.758 3.242 26 C -0.022 4.022 27 C -0.163 4.163 28 H 0.061 0.939 29 H 0.086 0.914 30 H 0.062 0.938 31 H 0.071 0.929 32 H 0.098 0.902 33 H 0.069 0.931 34 H 0.063 0.937 35 H 0.086 0.914 36 H 0.063 0.937 37 H 0.420 0.580 38 H 0.098 0.902 39 H 0.124 0.876 40 H 0.418 0.582 41 H 0.165 0.835 42 H 0.165 0.835 43 H 0.140 0.860 44 H 0.388 0.612 45 H -0.306 1.306 46 H -0.279 1.279 47 H 0.163 0.837 48 H 0.103 0.897 49 H 0.060 0.940 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.668 2.896 5.922 9.377 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.194 4.194 4 C -0.237 4.237 5 O -0.283 6.283 6 C 0.396 3.604 7 O -0.486 6.486 8 N -0.344 5.344 9 C 0.037 3.963 10 H 0.124 0.876 11 C -0.166 4.166 12 C 0.017 3.983 13 H 0.121 0.879 14 N -0.346 5.346 15 C 0.343 3.657 16 O -0.452 6.452 17 C -0.193 4.193 18 C 0.112 3.888 19 F -0.116 7.116 20 C -0.172 4.172 21 C -0.071 4.071 22 C -0.131 4.131 23 C -0.182 4.182 24 O -0.352 6.352 25 Si 0.664 3.336 26 C -0.040 4.040 27 C -0.203 4.203 28 H 0.080 0.920 29 H 0.105 0.895 30 H 0.081 0.919 31 H 0.090 0.910 32 H 0.116 0.884 33 H 0.088 0.912 34 H 0.082 0.918 35 H 0.105 0.895 36 H 0.082 0.918 37 H 0.258 0.742 38 H 0.116 0.884 39 H 0.142 0.858 40 H 0.257 0.743 41 H 0.182 0.818 42 H 0.182 0.818 43 H 0.157 0.843 44 H 0.237 0.763 45 H -0.234 1.234 46 H -0.206 1.206 47 H 0.180 0.820 48 H 0.122 0.878 49 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 6.204 2.487 5.503 8.658 hybrid contribution -1.082 0.859 -0.156 1.390 sum 5.122 3.346 5.347 8.125 Atomic orbital electron populations 1.22477 0.94227 1.03613 1.03483 1.22342 0.94316 0.92642 0.81557 1.21892 1.02535 0.90794 1.04228 1.22476 1.01730 1.02213 0.97329 1.86306 1.71494 1.23237 1.47223 1.18438 0.78603 0.80821 0.82515 1.90917 1.42172 1.70955 1.44555 1.44609 1.54937 1.11896 1.22995 1.22228 0.96425 0.79038 0.98643 0.87561 1.23708 0.96031 0.98361 0.98532 1.22225 0.98005 0.97613 0.80414 0.87947 1.45620 1.46107 1.34196 1.08689 1.18370 0.79681 0.80301 0.87344 1.90853 1.40237 1.48006 1.66106 1.20054 1.04453 1.01150 0.93601 1.18242 0.90274 0.89897 0.90346 1.91562 1.69930 1.72324 1.77786 1.21365 1.02230 1.03109 0.90498 1.21419 0.92235 0.92265 1.01147 1.20387 1.00073 0.98302 0.94365 1.25128 0.99844 0.83527 1.09695 1.86598 1.37346 1.25672 1.85572 0.94134 0.79042 0.88035 0.72390 1.21221 0.93861 0.95867 0.93070 1.24058 0.99072 0.98236 0.98933 0.91973 0.89514 0.91920 0.91023 0.88387 0.91180 0.91843 0.89545 0.91757 0.74229 0.88367 0.85760 0.74316 0.81786 0.81817 0.84271 0.76269 1.23427 1.20557 0.81986 0.87836 0.92153 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.68 8.37 71.98 0.60 -0.08 16 2 C 0.13 0.37 1.13 -10.80 -0.01 0.36 16 3 C -0.14 0.31 8.85 71.98 0.64 0.95 16 4 C -0.18 -0.59 8.37 71.98 0.60 0.01 16 5 O -0.37 -1.81 9.94 -55.35 -0.55 -2.36 16 6 C 0.64 3.98 8.06 129.79 1.05 5.02 16 7 O -0.60 -7.33 11.48 19.80 0.23 -7.10 16 8 N -0.68 0.86 5.36 -567.61 -3.04 -2.19 16 9 C 0.14 -0.27 4.24 45.52 0.19 -0.08 16 10 H 0.11 0.26 7.46 -2.39 -0.02 0.24 16 11 C -0.13 0.99 7.58 31.12 0.24 1.23 16 12 C 0.12 -0.23 4.25 45.58 0.19 -0.03 16 13 H 0.10 0.34 7.46 -2.39 -0.02 0.32 16 14 N -0.69 1.80 5.31 -442.76 -2.35 -0.55 16 15 C 0.55 3.23 7.77 86.74 0.67 3.91 16 16 O -0.57 -9.16 14.94 -3.95 -0.06 -9.22 16 17 C -0.19 -0.34 5.88 -20.05 -0.12 -0.46 16 18 C 0.13 0.58 7.29 22.67 0.17 0.74 16 19 F -0.14 -1.63 15.55 44.97 0.70 -0.93 16 20 C -0.15 0.43 10.01 22.28 0.22 0.66 16 21 C -0.05 0.38 8.66 22.31 0.19 0.57 16 22 C -0.13 0.94 5.35 -19.90 -0.11 0.83 16 23 C -0.07 0.63 2.80 71.24 0.20 0.83 16 24 O -0.54 2.93 12.83 -148.98 -1.91 1.01 16 25 Si 0.76 -6.06 29.87 68.60 2.05 -4.02 16 26 C -0.02 0.12 9.17 22.52 0.21 0.33 16 27 C -0.16 0.17 7.69 31.18 0.24 0.41 16 28 H 0.06 0.19 8.14 -2.38 -0.02 0.17 16 29 H 0.09 0.03 8.14 -2.39 -0.02 0.01 16 30 H 0.06 0.59 5.88 -2.39 -0.01 0.57 16 31 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 32 H 0.10 -0.52 8.14 -2.38 -0.02 -0.54 16 33 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 34 H 0.06 0.55 5.88 -2.39 -0.01 0.54 16 35 H 0.09 0.00 8.14 -2.38 -0.02 -0.02 16 36 H 0.06 0.14 8.14 -2.38 -0.02 0.12 16 37 H 0.42 -2.91 8.84 -92.72 -0.82 -3.72 16 38 H 0.10 -0.80 8.14 -2.39 -0.02 -0.82 16 39 H 0.12 -1.64 8.09 -2.39 -0.02 -1.66 16 40 H 0.42 -4.10 6.76 -92.71 -0.63 -4.72 16 41 H 0.16 -1.06 8.06 -2.91 -0.02 -1.09 16 42 H 0.16 -1.94 4.82 -2.91 -0.01 -1.95 16 43 H 0.14 -1.60 7.96 -2.39 -0.02 -1.62 16 44 H 0.39 -3.91 8.70 -74.06 -0.64 -4.56 16 45 H -0.31 -0.32 7.11 99.48 0.71 0.39 16 46 H -0.28 1.21 7.00 99.48 0.70 1.91 16 47 H 0.16 -1.80 6.41 -2.91 -0.02 -1.82 16 48 H 0.10 -0.36 8.14 -2.39 -0.02 -0.38 16 49 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 Total: 0.00 -28.16 402.59 -0.80 -28.97 By element: Atomic # 1 Polarization: -17.78 SS G_CDS: -1.04 Total: -18.82 kcal Atomic # 6 Polarization: 10.03 SS G_CDS: 5.17 Total: 15.20 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -5.39 Total: -2.73 kcal Atomic # 8 Polarization: -15.37 SS G_CDS: -2.29 Total: -17.66 kcal Atomic # 9 Polarization: -1.63 SS G_CDS: 0.70 Total: -0.93 kcal Atomic # 14 Polarization: -6.06 SS G_CDS: 2.05 Total: -4.02 kcal Total: -28.16 -0.80 -28.97 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_12335834.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.787 kcal (2) G-P(sol) polarization free energy of solvation -28.163 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.950 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.803 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.966 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.752 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds