Wall clock time and date at job start Sun Mar 7 2021 00:25:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52998 * 109.47185 * 2 1 4 4 C 1.53001 * 109.47127 * 240.00130 * 2 1 3 5 5 O 1.45200 * 109.47337 * 119.99939 * 2 1 3 6 6 C 1.34639 * 116.99776 * 60.00110 * 5 2 1 7 7 O 1.21514 * 119.99876 * 359.97438 * 6 5 2 8 8 N 1.34768 * 119.99961 * 180.02562 * 6 5 2 9 9 C 1.46500 * 120.00181 * 179.97438 * 8 6 5 10 10 H 1.08997 * 112.85193 * 336.19893 * 9 8 6 11 11 C 1.53788 * 113.69092 * 107.46282 * 9 8 6 12 12 C 1.53785 * 87.08025 * 139.99169 * 11 9 8 13 13 H 1.09007 * 113.68443 * 89.12834 * 12 11 9 14 14 N 1.46492 * 113.61531 * 220.01816 * 12 11 9 15 15 C 1.34774 * 120.00345 * 252.50431 * 14 12 11 16 16 O 1.21286 * 119.99717 * 359.97438 * 15 14 12 17 17 C 1.50701 * 120.00373 * 180.02562 * 15 14 12 18 18 C 1.50701 * 109.47148 * 179.97438 * 17 15 14 19 19 C 1.38235 * 119.99808 * 89.99755 * 18 17 15 20 20 C 1.38243 * 119.99602 * 179.97438 * 19 18 17 21 21 C 1.38231 * 120.00070 * 0.07188 * 20 19 18 22 22 C 1.50701 * 119.99846 * 179.97438 * 21 20 19 23 23 O 1.42898 * 109.46824 * 119.88886 * 22 21 20 24 24 Si 1.86298 * 109.47254 * 359.89071 * 22 21 20 25 25 C 1.38234 * 119.99869 * 359.88510 * 21 20 19 26 26 C 1.38230 * 119.99865 * 269.97500 * 18 17 15 27 27 C 1.53774 * 87.08337 * 334.57039 * 12 11 9 28 28 H 1.08999 * 109.47012 * 299.99805 * 1 2 3 29 29 H 1.09000 * 109.47058 * 60.00334 * 1 2 3 30 30 H 1.09002 * 109.47110 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.47733 * 179.97438 * 3 2 1 32 32 H 1.09004 * 109.47410 * 300.00267 * 3 2 1 33 33 H 1.09006 * 109.46837 * 59.99503 * 3 2 1 34 34 H 1.09002 * 109.46972 * 299.99896 * 4 2 1 35 35 H 1.08998 * 109.47033 * 59.99676 * 4 2 1 36 36 H 1.09000 * 109.47340 * 180.02562 * 4 2 1 37 37 H 0.97004 * 120.00586 * 0.02562 * 8 6 5 38 38 H 1.08997 * 113.60913 * 25.44918 * 11 9 8 39 39 H 1.08998 * 113.61455 * 254.54539 * 11 9 8 40 40 H 0.97000 * 119.99885 * 72.50037 * 14 12 11 41 41 H 1.08993 * 109.47576 * 59.99137 * 17 15 14 42 42 H 1.09001 * 109.46592 * 299.99075 * 17 15 14 43 43 H 1.08000 * 120.00616 * 359.70324 * 19 18 17 44 44 H 1.08001 * 119.99556 * 179.97438 * 20 19 18 45 45 H 1.08998 * 109.47369 * 239.88874 * 22 21 20 46 46 H 0.96696 * 114.00259 * 299.99460 * 23 22 21 47 47 H 1.48497 * 110.00208 * 58.67606 * 24 22 21 48 48 H 1.48499 * 110.00250 * 180.02562 * 24 22 21 49 49 H 1.08007 * 119.99474 * 180.10845 * 25 21 20 50 50 H 1.08001 * 120.00350 * 359.97438 * 26 18 17 51 51 H 1.08998 * 113.61667 * 139.97929 * 27 12 11 52 52 H 1.09001 * 113.61425 * 270.88017 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0141 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9509 -2.5094 0.5040 8 7 2.0673 -2.6654 2.4170 9 6 1.6732 -4.0665 2.5836 10 1 0.7589 -4.3160 2.0452 11 6 2.8198 -5.0634 2.3453 12 6 2.2702 -5.8603 3.5403 13 1 1.5191 -6.6006 3.2647 14 7 3.3139 -6.4059 4.4116 15 6 3.5707 -7.7289 4.4086 16 8 2.9374 -8.4679 3.6849 17 6 4.6439 -8.2903 5.3054 18 6 4.7295 -9.7825 5.1129 19 6 5.5774 -10.3084 4.1561 20 6 5.6563 -11.6773 3.9800 21 6 4.8864 -12.5200 4.7596 22 6 4.9721 -14.0122 4.5672 23 8 5.4035 -14.6253 5.7837 24 14 6.1922 -14.3946 3.2123 25 6 4.0392 -11.9940 5.7170 26 6 3.9607 -10.6253 5.8935 27 6 1.6737 -4.5369 4.0477 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 3.1300 1.4426 0.0005 32 1 1.6767 1.9564 -0.8900 33 1 1.6766 1.9563 0.8900 34 1 1.6767 -1.7489 -1.2493 35 1 1.6766 -0.2074 -2.1392 36 1 3.1300 -0.7216 -1.2491 37 1 2.6263 -2.2364 3.0837 38 1 3.8091 -4.6408 2.5203 39 1 2.7469 -5.5940 1.3960 40 1 3.8201 -5.8149 4.9907 41 1 4.3998 -8.0717 6.3449 42 1 5.6020 -7.8356 5.0538 43 1 6.1748 -9.6498 3.5432 44 1 6.3184 -12.0882 3.2322 45 1 3.9911 -14.4001 4.2928 46 1 6.2713 -14.3267 6.0885 47 1 7.5264 -13.8431 3.5598 48 1 6.2854 -15.8631 3.0123 49 1 3.4390 -12.6526 6.3273 50 1 3.2988 -10.2144 6.6416 51 1 0.6756 -4.6424 4.4727 52 1 2.3498 -3.9703 4.6881 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_12335836.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:25:44 Heat of formation + Delta-G solvation = -98.749460 kcal Electronic energy + Delta-G solvation = -31694.280402 eV Core-core repulsion = 27240.176581 eV Total energy + Delta-G solvation = -4454.103821 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.192 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.88692 -41.29884 -40.54168 -39.52630 -37.88595 -37.62936 -35.48847 -34.84642 -34.10852 -33.28325 -31.90948 -29.81336 -28.33288 -28.28843 -26.95841 -26.40489 -25.25838 -23.78806 -23.20119 -22.09669 -21.64018 -21.23714 -20.74784 -19.11970 -18.50079 -18.17866 -18.03885 -17.28956 -17.08577 -17.00292 -16.64130 -16.37805 -16.13050 -16.12452 -15.72056 -15.54092 -15.38219 -15.25146 -14.75450 -14.69147 -14.46335 -14.33924 -14.03746 -13.89238 -13.74252 -13.43428 -13.25259 -13.22195 -13.09052 -12.90097 -12.85364 -12.83034 -12.55974 -12.48309 -12.37348 -12.21605 -12.19235 -12.03067 -11.97142 -11.55975 -11.30211 -10.96742 -10.89835 -10.55366 -10.28282 -10.04516 -9.83035 -9.59374 -4.90631 0.26577 0.49961 1.15838 1.33290 1.59764 1.63181 1.86316 1.99339 2.09132 2.79351 3.10232 3.24738 3.34830 3.40724 3.55989 3.68281 3.72068 3.77512 3.77875 3.83020 3.84023 3.93201 3.96912 4.04820 4.23047 4.36235 4.40886 4.43297 4.46050 4.48907 4.55956 4.60512 4.62795 4.67027 4.68076 4.71340 4.77858 4.85147 4.89032 4.93003 4.95415 5.02499 5.08148 5.09995 5.25446 5.36614 5.39531 5.41912 5.47157 5.57528 5.59007 5.60597 6.02879 6.37047 6.41560 6.44046 7.18585 7.41137 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.650 3.350 7 O -0.564 6.564 8 N -0.700 5.700 9 C 0.143 3.857 10 H 0.125 0.875 11 C -0.166 4.166 12 C 0.128 3.872 13 H 0.122 0.878 14 N -0.722 5.722 15 C 0.516 3.484 16 O -0.524 6.524 17 C -0.104 4.104 18 C -0.064 4.064 19 C -0.100 4.100 20 C -0.115 4.115 21 C -0.117 4.117 22 C -0.075 4.075 23 O -0.530 6.530 24 Si 0.684 3.316 25 C -0.091 4.091 26 C -0.104 4.104 27 C -0.153 4.153 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.406 0.594 38 H 0.090 0.910 39 H 0.082 0.918 40 H 0.402 0.598 41 H 0.105 0.895 42 H 0.105 0.895 43 H 0.124 0.876 44 H 0.127 0.873 45 H 0.118 0.882 46 H 0.375 0.625 47 H -0.261 1.261 48 H -0.257 1.257 49 H 0.126 0.874 50 H 0.122 0.878 51 H 0.088 0.912 52 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.577 5.774 2.317 6.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.453 6.453 8 N -0.359 5.359 9 C 0.039 3.961 10 H 0.142 0.858 11 C -0.206 4.206 12 C 0.022 3.978 13 H 0.140 0.860 14 N -0.374 5.374 15 C 0.302 3.698 16 O -0.398 6.398 17 C -0.144 4.144 18 C -0.064 4.064 19 C -0.118 4.118 20 C -0.132 4.132 21 C -0.117 4.117 22 C -0.185 4.185 23 O -0.336 6.336 24 Si 0.586 3.414 25 C -0.109 4.109 26 C -0.122 4.122 27 C -0.192 4.192 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.241 0.759 38 H 0.109 0.891 39 H 0.100 0.900 40 H 0.236 0.764 41 H 0.123 0.877 42 H 0.123 0.877 43 H 0.142 0.858 44 H 0.144 0.856 45 H 0.136 0.864 46 H 0.223 0.777 47 H -0.185 1.185 48 H -0.182 1.182 49 H 0.144 0.856 50 H 0.140 0.860 51 H 0.106 0.894 52 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 1.920 4.331 1.033 4.849 hybrid contribution 0.943 0.730 1.655 2.040 sum 2.863 5.061 2.688 6.406 Atomic orbital electron populations 1.22525 0.93818 1.05070 1.02724 1.22122 0.94461 0.91544 0.81855 1.21880 1.02314 0.92364 1.03346 1.22522 1.01588 1.03478 0.96546 1.86305 1.71496 1.23446 1.46765 1.18160 0.78628 0.80569 0.82256 1.90926 1.40859 1.70501 1.43025 1.44665 1.55465 1.12016 1.23732 1.22295 0.99330 0.77710 0.96784 0.85757 1.24042 0.99357 0.97206 1.00007 1.22215 0.90978 0.94087 0.90531 0.86009 1.45925 1.38916 1.08141 1.44423 1.20613 0.84192 0.81928 0.83093 1.90769 1.49917 1.58222 1.40909 1.20698 0.99296 0.93402 1.00971 1.19264 0.97017 0.93429 0.96732 1.20904 0.98681 0.94912 0.97273 1.20940 0.99458 0.93682 0.99132 1.20267 0.98037 0.95675 0.97731 1.25026 1.08233 0.90537 0.94719 1.86596 1.39658 1.67704 1.39670 0.94889 0.78894 0.81699 0.85950 1.20960 0.97747 0.94832 0.97340 1.21011 0.98391 0.93358 0.99414 1.23799 1.03089 0.95935 0.96381 0.92124 0.90909 0.89411 0.91411 0.89915 0.91407 0.89404 0.90912 0.92138 0.75865 0.89101 0.89974 0.76369 0.87696 0.87685 0.85804 0.85607 0.86395 0.77735 1.18535 1.18233 0.85620 0.85997 0.89360 0.88732 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 2 C 0.14 0.15 1.13 -90.62 -0.10 0.04 16 3 C -0.14 0.14 8.85 37.16 0.33 0.46 16 4 C -0.18 -0.22 8.37 37.16 0.31 0.09 16 5 O -0.37 -0.72 9.94 -40.32 -0.40 -1.12 16 6 C 0.65 1.49 8.06 54.05 0.44 1.92 16 7 O -0.56 -2.71 11.48 -19.28 -0.22 -2.93 16 8 N -0.70 0.71 5.36 -57.93 -0.31 0.40 16 9 C 0.14 -0.24 4.24 -67.11 -0.28 -0.53 16 10 H 0.12 -0.01 7.46 -51.93 -0.39 -0.40 16 11 C -0.17 0.29 7.68 -25.91 -0.20 0.09 16 12 C 0.13 -0.27 4.24 -67.12 -0.28 -0.55 16 13 H 0.12 -0.02 7.46 -51.92 -0.39 -0.40 16 14 N -0.72 2.04 5.35 -53.02 -0.28 1.76 16 15 C 0.52 -0.02 7.82 -10.99 -0.09 -0.10 16 16 O -0.52 -2.43 15.63 5.55 0.09 -2.34 16 17 C -0.10 0.24 5.83 -29.03 -0.17 0.07 16 18 C -0.06 -0.03 4.37 -104.63 -0.46 -0.49 16 19 C -0.10 -0.06 9.70 -39.58 -0.38 -0.45 16 20 C -0.11 -0.09 8.67 -39.58 -0.34 -0.43 16 21 C -0.12 -0.15 5.39 -104.63 -0.56 -0.71 16 22 C -0.08 -0.06 2.82 36.01 0.10 0.04 16 23 O -0.53 -1.01 12.77 -35.23 -0.45 -1.46 16 24 Si 0.68 -0.04 29.79 -169.99 -5.06 -5.10 16 25 C -0.09 -0.15 9.61 -39.58 -0.38 -0.53 16 26 C -0.10 -0.11 9.70 -39.59 -0.38 -0.49 16 27 C -0.15 0.59 7.58 -25.92 -0.20 0.40 16 28 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 29 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 30 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 34 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 37 H 0.41 -1.32 8.84 -40.82 -0.36 -1.68 16 38 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 39 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 40 H 0.40 -2.31 8.73 -40.82 -0.36 -2.67 16 41 H 0.10 -0.46 8.08 -51.93 -0.42 -0.88 16 42 H 0.10 -0.47 8.09 -51.93 -0.42 -0.89 16 43 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 44 H 0.13 -0.12 4.88 -52.49 -0.26 -0.37 16 45 H 0.12 0.04 7.96 -51.93 -0.41 -0.37 16 46 H 0.38 -0.38 8.70 45.56 0.40 0.02 16 47 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 48 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 49 H 0.13 0.14 8.06 -52.48 -0.42 -0.29 16 50 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 51 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 52 H 0.09 -0.52 8.10 -51.93 -0.42 -0.94 16 LS Contribution 422.64 15.07 6.37 6.37 Total: 0.00 -9.94 422.64 -10.95 -20.89 By element: Atomic # 1 Polarization: -7.08 SS G_CDS: -8.33 Total: -15.41 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: -2.35 Total: -1.05 kcal Atomic # 7 Polarization: 2.75 SS G_CDS: -0.59 Total: 2.15 kcal Atomic # 8 Polarization: -6.86 SS G_CDS: -0.99 Total: -7.85 kcal Atomic # 14 Polarization: -0.04 SS G_CDS: -5.06 Total: -5.10 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -9.94 -10.95 -20.89 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_12335836.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.861 kcal (2) G-P(sol) polarization free energy of solvation -9.937 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.798 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.951 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.889 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.749 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds