Wall clock time and date at job start Sun Mar 7 2021 00:26:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52999 * 109.47279 * 2 1 4 4 C 1.53000 * 109.47527 * 239.99467 * 2 1 3 5 5 O 1.45204 * 109.47098 * 119.99614 * 2 1 3 6 6 C 1.34632 * 116.99777 * 60.00016 * 5 2 1 7 7 O 1.21509 * 120.00461 * 359.97438 * 6 5 2 8 8 N 1.34778 * 120.00100 * 180.02562 * 6 5 2 9 9 C 1.46504 * 120.00307 * 179.97438 * 8 6 5 10 10 H 1.08997 * 112.84906 * 336.19406 * 9 8 6 11 11 C 1.53950 * 113.66423 * 107.44207 * 9 8 6 12 12 C 1.53778 * 87.02042 * 139.93533 * 11 9 8 13 13 H 1.08997 * 113.61625 * 89.22472 * 12 11 9 14 14 N 1.46497 * 113.61171 * 220.04882 * 12 11 9 15 15 C 1.34772 * 120.00068 * 254.13132 * 14 12 11 16 16 O 1.21560 * 119.99754 * 0.02562 * 15 14 12 17 17 C 1.47857 * 120.00444 * 180.02562 * 15 14 12 18 18 C 1.39534 * 120.13718 * 359.97438 * 17 15 14 19 19 C 1.38071 * 119.84296 * 179.97438 * 18 17 15 20 20 Br 1.89102 * 119.93894 * 179.97438 * 19 18 17 21 21 C 1.38423 * 120.12249 * 0.02562 * 19 18 17 22 22 C 1.38364 * 120.28188 * 359.97438 * 21 19 18 23 23 C 1.50694 * 119.91781 * 180.02562 * 22 21 19 24 24 O 1.42901 * 109.47118 * 244.99566 * 23 22 21 25 25 Si 1.86298 * 109.47775 * 4.99811 * 23 22 21 26 26 C 1.37939 * 120.15520 * 0.27219 * 22 21 19 27 27 C 1.53775 * 113.61352 * 205.00111 * 9 8 6 28 28 H 1.08995 * 109.47412 * 300.00500 * 1 2 3 29 29 H 1.09009 * 109.46797 * 60.00529 * 1 2 3 30 30 H 1.08999 * 109.46996 * 179.97438 * 1 2 3 31 31 H 1.09003 * 109.47385 * 179.97438 * 3 2 1 32 32 H 1.09009 * 109.46774 * 299.99485 * 3 2 1 33 33 H 1.08995 * 109.47307 * 59.99436 * 3 2 1 34 34 H 1.09006 * 109.47236 * 300.00566 * 4 2 1 35 35 H 1.09004 * 109.46637 * 60.00280 * 4 2 1 36 36 H 1.08994 * 109.47461 * 180.02562 * 4 2 1 37 37 H 0.96998 * 119.99656 * 0.02562 * 8 6 5 38 38 H 1.09003 * 113.61338 * 25.41038 * 11 9 8 39 39 H 1.09008 * 113.66698 * 254.45963 * 11 9 8 40 40 H 0.96997 * 120.00462 * 74.13647 * 14 12 11 41 41 H 1.08003 * 120.08195 * 0.02562 * 18 17 15 42 42 H 1.08005 * 119.85584 * 179.97438 * 21 19 18 43 43 H 1.09004 * 109.47407 * 124.99923 * 23 22 21 44 44 H 0.96708 * 114.00246 * 180.02562 * 24 23 22 45 45 H 1.48506 * 109.99834 * 300.00486 * 25 23 22 46 46 H 1.48502 * 110.00011 * 61.31751 * 25 23 22 47 47 H 1.08003 * 120.05779 * 179.72247 * 26 22 21 48 48 H 1.09000 * 113.61661 * 105.47413 * 27 9 8 49 49 H 1.09001 * 113.69579 * 334.57606 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2491 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9722 1.3384 7 8 0.9509 -2.5094 0.5042 8 7 2.0671 -2.6653 2.4173 9 6 1.6730 -4.0665 2.5839 10 1 0.7587 -4.3158 2.0456 11 6 2.8211 -5.0639 2.3449 12 6 2.2720 -5.8592 3.5410 13 1 1.5220 -6.6005 3.2652 14 7 3.3160 -6.4033 4.4129 15 6 3.5957 -7.7214 4.3877 16 8 2.9819 -8.4588 3.6412 17 6 4.6489 -8.2707 5.2681 18 6 5.3556 -7.4269 6.1257 19 6 6.3376 -7.9464 6.9456 20 35 7.2975 -6.8051 8.1084 21 6 6.6215 -9.3009 6.9172 22 6 5.9239 -10.1423 6.0687 23 6 6.2393 -11.6157 6.0449 24 8 6.7702 -11.9686 4.7660 25 14 7.4936 -12.0039 7.3665 26 6 4.9440 -9.6348 5.2411 27 6 1.6734 -4.5365 4.0481 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1300 1.4425 0.0005 32 1 1.6767 1.9563 -0.8901 33 1 1.6767 1.9563 0.8899 34 1 1.6767 -1.7491 -1.2491 35 1 1.6768 -0.2075 -2.1392 36 1 3.1300 -0.7217 -1.2489 37 1 2.6261 -2.2362 3.0838 38 1 3.8104 -4.6408 2.5189 39 1 2.7481 -5.5960 1.3963 40 1 3.8060 -5.8149 5.0083 41 1 5.1345 -6.3700 6.1488 42 1 7.3908 -9.7026 7.5600 43 1 5.3285 -12.1853 6.2299 44 1 6.9960 -12.9048 4.6785 45 1 8.7401 -11.2335 7.1257 46 1 6.9414 -11.6711 8.7043 47 1 4.4036 -10.2923 4.5762 48 1 0.6752 -4.6434 4.4726 49 1 2.3479 -3.9697 4.6899 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941094_12335870.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:26:10 Heat of formation + Delta-G solvation = -86.892652 kcal Electronic energy + Delta-G solvation = -32152.587059 eV Core-core repulsion = 27514.717004 eV Total energy + Delta-G solvation = -4637.870055 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.087 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.02944 -41.67120 -40.59815 -39.50519 -37.95975 -37.65732 -35.68712 -35.04973 -33.89177 -33.78681 -32.70110 -30.62127 -28.39422 -28.32422 -27.12277 -26.84977 -26.66118 -24.88091 -23.01765 -22.79681 -21.70606 -21.38862 -20.82749 -19.29107 -18.84560 -18.48304 -18.23929 -17.79193 -17.44956 -17.21523 -16.86061 -16.44756 -16.27960 -16.08645 -15.76827 -15.48850 -15.35878 -15.26772 -14.91728 -14.83625 -14.48093 -14.42204 -14.21854 -13.93041 -13.63466 -13.56702 -13.38992 -13.17301 -12.95083 -12.89037 -12.79743 -12.62523 -12.55383 -12.45696 -12.43299 -12.23238 -12.17889 -12.04657 -11.96460 -11.62654 -11.42212 -11.23567 -11.14220 -10.56676 -10.37883 -10.26568 -10.09783 -10.02162 -4.99961 -0.66400 -0.27941 0.26197 1.10364 1.20734 1.39812 1.60600 1.70192 1.87657 1.92500 2.34503 3.09011 3.12607 3.21064 3.33826 3.43570 3.60745 3.63789 3.71780 3.74175 3.76106 3.78042 3.83042 3.89503 3.92032 4.05039 4.20409 4.40017 4.45726 4.54453 4.55052 4.58707 4.60501 4.61677 4.70309 4.74046 4.80652 4.81657 4.82317 4.85437 4.90285 4.95574 4.98159 5.09364 5.20966 5.24567 5.25406 5.31909 5.45156 5.56569 6.28856 6.37397 6.84327 6.96603 7.31244 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.137 4.137 4 C -0.180 4.180 5 O -0.368 6.368 6 C 0.643 3.357 7 O -0.595 6.595 8 N -0.685 5.685 9 C 0.141 3.859 10 H 0.108 0.892 11 C -0.163 4.163 12 C 0.124 3.876 13 H 0.107 0.893 14 N -0.696 5.696 15 C 0.564 3.436 16 O -0.567 6.567 17 C -0.133 4.133 18 C -0.043 4.043 19 C -0.100 4.100 20 Br -0.028 7.028 21 C -0.082 4.082 22 C -0.084 4.084 23 C -0.082 4.082 24 O -0.563 6.563 25 Si 0.768 3.232 26 C -0.026 4.026 27 C -0.129 4.129 28 H 0.063 0.937 29 H 0.086 0.914 30 H 0.063 0.937 31 H 0.069 0.931 32 H 0.097 0.903 33 H 0.070 0.930 34 H 0.062 0.938 35 H 0.086 0.914 36 H 0.061 0.939 37 H 0.420 0.580 38 H 0.102 0.898 39 H 0.062 0.938 40 H 0.417 0.583 41 H 0.170 0.830 42 H 0.132 0.868 43 H 0.101 0.899 44 H 0.407 0.593 45 H -0.289 1.289 46 H -0.280 1.280 47 H 0.141 0.859 48 H 0.099 0.901 49 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.006 0.887 4.616 5.111 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.194 4.194 4 C -0.238 4.238 5 O -0.283 6.283 6 C 0.396 3.604 7 O -0.486 6.486 8 N -0.345 5.345 9 C 0.037 3.963 10 H 0.126 0.874 11 C -0.204 4.204 12 C 0.019 3.981 13 H 0.125 0.875 14 N -0.347 5.347 15 C 0.351 3.649 16 O -0.447 6.447 17 C -0.137 4.137 18 C -0.063 4.063 19 C -0.180 4.180 20 Br 0.058 6.942 21 C -0.102 4.102 22 C -0.085 4.085 23 C -0.192 4.192 24 O -0.374 6.374 25 Si 0.673 3.327 26 C -0.046 4.046 27 C -0.168 4.168 28 H 0.082 0.918 29 H 0.104 0.896 30 H 0.082 0.918 31 H 0.088 0.912 32 H 0.116 0.884 33 H 0.089 0.911 34 H 0.081 0.919 35 H 0.105 0.895 36 H 0.080 0.920 37 H 0.257 0.743 38 H 0.121 0.879 39 H 0.081 0.919 40 H 0.255 0.745 41 H 0.188 0.812 42 H 0.150 0.850 43 H 0.119 0.881 44 H 0.258 0.742 45 H -0.216 1.216 46 H -0.207 1.207 47 H 0.159 0.841 48 H 0.117 0.883 49 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 1.963 1.586 4.604 5.250 hybrid contribution -0.126 0.316 -0.207 0.398 sum 1.837 1.903 4.397 5.131 Atomic orbital electron populations 1.22473 0.93999 1.03695 1.03555 1.22347 0.94485 0.92585 0.81472 1.21890 1.02442 0.90836 1.04279 1.22476 1.01599 1.02224 0.97470 1.86310 1.71502 1.23267 1.47193 1.18439 0.78567 0.80738 0.82633 1.90915 1.42309 1.71056 1.44293 1.44620 1.54914 1.11919 1.23029 1.22277 0.98458 0.77311 0.98294 0.87429 1.24063 1.00101 0.97110 0.99089 1.22245 0.90390 0.94744 0.90757 0.87487 1.45683 1.38766 1.07395 1.42902 1.18233 0.82152 0.82841 0.81647 1.90811 1.52505 1.59589 1.41768 1.19963 0.99213 0.94628 0.99877 1.21487 0.91890 1.01165 0.91772 1.21714 1.00981 0.94145 1.01148 1.96836 1.73396 1.62774 1.61209 1.21234 0.98203 0.92519 0.98234 1.19601 0.96414 0.95747 0.96781 1.24857 1.06884 0.92021 0.95424 1.86445 1.85372 1.33831 1.31706 0.94073 0.75751 0.89131 0.73738 1.21329 0.94064 0.94347 0.94823 1.23715 1.04147 0.93735 0.95190 0.91788 0.89552 0.91809 0.91195 0.88390 0.91055 0.91885 0.89516 0.91996 0.74270 0.87933 0.91915 0.74450 0.81230 0.85029 0.88111 0.74166 1.21649 1.20668 0.84136 0.88265 0.85894 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.55 8.37 71.98 0.60 0.05 16 2 C 0.13 0.35 1.13 -10.79 -0.01 0.34 16 3 C -0.14 0.32 8.85 71.98 0.64 0.96 16 4 C -0.18 -0.64 8.37 71.98 0.60 -0.04 16 5 O -0.37 -1.74 9.94 -55.42 -0.55 -2.29 16 6 C 0.64 3.77 8.06 129.79 1.05 4.81 16 7 O -0.59 -7.08 11.48 19.81 0.23 -6.85 16 8 N -0.69 1.11 5.36 -567.34 -3.04 -1.93 16 9 C 0.14 -0.37 4.24 45.57 0.19 -0.18 16 10 H 0.11 0.17 7.46 -2.39 -0.02 0.15 16 11 C -0.16 0.31 7.69 31.18 0.24 0.55 16 12 C 0.12 -0.38 4.21 45.52 0.19 -0.19 16 13 H 0.11 0.13 7.50 -2.39 -0.02 0.11 16 14 N -0.70 2.40 5.31 -442.90 -2.35 0.04 16 15 C 0.56 2.37 7.77 86.79 0.67 3.05 16 16 O -0.57 -7.18 15.97 -3.90 -0.06 -7.25 16 17 C -0.13 -0.35 5.87 -20.09 -0.12 -0.47 16 18 C -0.04 0.06 9.28 22.54 0.21 0.27 16 19 C -0.10 -0.15 6.22 22.27 0.14 -0.01 16 20 Br -0.03 -0.01 33.69 -20.37 -0.69 -0.70 16 21 C -0.08 -0.28 8.40 22.34 0.19 -0.10 16 22 C -0.08 -0.29 5.38 -19.91 -0.11 -0.39 16 23 C -0.08 0.13 2.79 71.23 0.20 0.33 16 24 O -0.56 0.40 12.80 -148.98 -1.91 -1.51 16 25 Si 0.77 -2.58 29.84 68.60 2.05 -0.53 16 26 C -0.03 -0.13 9.22 22.53 0.21 0.08 16 27 C -0.13 1.09 7.58 31.12 0.24 1.33 16 28 H 0.06 0.13 8.14 -2.39 -0.02 0.12 16 29 H 0.09 -0.01 8.14 -2.38 -0.02 -0.03 16 30 H 0.06 0.54 5.88 -2.39 -0.01 0.53 16 31 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 32 H 0.10 -0.53 8.14 -2.38 -0.02 -0.55 16 33 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 34 H 0.06 0.57 5.88 -2.38 -0.01 0.56 16 35 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 36 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 37 H 0.42 -3.00 8.84 -92.71 -0.82 -3.81 16 38 H 0.10 -0.41 8.14 -2.39 -0.02 -0.43 16 39 H 0.06 0.17 8.14 -2.38 -0.02 0.15 16 40 H 0.42 -4.17 6.75 -92.71 -0.63 -4.80 16 41 H 0.17 -1.45 6.41 -2.91 -0.02 -1.47 16 42 H 0.13 0.42 4.85 -2.91 -0.01 0.40 16 43 H 0.10 -0.56 7.96 -2.38 -0.02 -0.58 16 44 H 0.41 -4.58 8.74 -74.05 -0.65 -5.23 16 45 H -0.29 -1.05 7.05 99.48 0.70 -0.35 16 46 H -0.28 -0.41 7.11 99.48 0.71 0.30 16 47 H 0.14 0.88 7.65 -2.91 -0.02 0.86 16 48 H 0.10 -0.89 8.14 -2.39 -0.02 -0.91 16 49 H 0.12 -1.67 8.09 -2.39 -0.02 -1.69 16 Total: 0.00 -25.31 419.43 -2.23 -27.55 By element: Atomic # 1 Polarization: -15.90 SS G_CDS: -1.04 Total: -16.93 kcal Atomic # 6 Polarization: 5.27 SS G_CDS: 5.13 Total: 10.40 kcal Atomic # 7 Polarization: 3.51 SS G_CDS: -5.39 Total: -1.89 kcal Atomic # 8 Polarization: -15.60 SS G_CDS: -2.29 Total: -17.89 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: 2.05 Total: -0.53 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -0.69 Total: -0.70 kcal Total: -25.31 -2.23 -27.55 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_12335870.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.346 kcal (2) G-P(sol) polarization free energy of solvation -25.312 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.658 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.235 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.546 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.893 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds