Wall clock time and date at job start Sun Mar 7 2021 00:26:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52999 * 109.47556 * 2 1 4 4 C 1.53008 * 109.47066 * 239.99972 * 2 1 3 5 5 O 1.45194 * 109.47124 * 120.00424 * 2 1 3 6 6 C 1.34635 * 117.00470 * 59.99616 * 5 2 1 7 7 O 1.21509 * 119.99856 * 359.97438 * 6 5 2 8 8 N 1.34780 * 120.00490 * 180.02562 * 6 5 2 9 9 C 1.46493 * 120.00145 * 179.97438 * 8 6 5 10 10 H 1.08996 * 112.85315 * 336.19735 * 9 8 6 11 11 C 1.53781 * 113.69264 * 107.46360 * 9 8 6 12 12 C 1.53776 * 87.08442 * 139.99108 * 11 9 8 13 13 H 1.09004 * 113.69027 * 89.12842 * 12 11 9 14 14 N 1.46504 * 113.61701 * 220.02335 * 12 11 9 15 15 C 1.34770 * 119.99716 * 252.49601 * 14 12 11 16 16 O 1.21569 * 120.00556 * 0.02562 * 15 14 12 17 17 C 1.47727 * 120.00284 * 179.97438 * 15 14 12 18 18 C 1.39624 * 120.12170 * 179.97438 * 17 15 14 19 19 C 1.37863 * 119.88068 * 179.72802 * 18 17 15 20 20 C 1.50693 * 119.94273 * 180.25673 * 19 18 17 21 21 O 1.42894 * 109.47171 * 254.99690 * 20 19 18 22 22 Si 1.86309 * 109.47147 * 134.99932 * 20 19 18 23 23 C 1.38633 * 120.11623 * 0.27337 * 19 18 17 24 24 F 1.35101 * 119.88256 * 179.97438 * 23 19 18 25 25 C 1.38681 * 120.24152 * 0.02562 * 23 19 18 26 26 C 1.37819 * 120.11431 * 359.97438 * 25 23 19 27 27 C 1.53779 * 87.08135 * 334.56818 * 12 11 9 28 28 H 1.09001 * 109.46981 * 300.00259 * 1 2 3 29 29 H 1.09006 * 109.46949 * 59.99537 * 1 2 3 30 30 H 1.08994 * 109.47469 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.47196 * 180.02562 * 3 2 1 32 32 H 1.08998 * 109.47203 * 299.99940 * 3 2 1 33 33 H 1.09001 * 109.47187 * 59.99867 * 3 2 1 34 34 H 1.09003 * 109.46922 * 300.00169 * 4 2 1 35 35 H 1.08998 * 109.47136 * 60.00401 * 4 2 1 36 36 H 1.09003 * 109.46989 * 180.02562 * 4 2 1 37 37 H 0.97000 * 119.99457 * 0.02562 * 8 6 5 38 38 H 1.09007 * 113.61087 * 25.44361 * 11 9 8 39 39 H 1.08994 * 113.61728 * 254.54750 * 11 9 8 40 40 H 0.96997 * 119.99805 * 72.49659 * 14 12 11 41 41 H 1.08002 * 120.06329 * 0.02562 * 18 17 15 42 42 H 1.09006 * 109.47073 * 15.00137 * 20 19 18 43 43 H 0.96701 * 114.00540 * 179.97438 * 21 20 19 44 44 H 1.48497 * 110.00024 * 60.00045 * 22 20 19 45 45 H 1.48497 * 109.99587 * 181.32077 * 22 20 19 46 46 H 1.07995 * 119.94170 * 179.97438 * 25 23 19 47 47 H 1.08002 * 120.05553 * 179.97438 * 26 25 23 48 48 H 1.09007 * 113.61618 * 139.97432 * 27 12 11 49 49 H 1.08994 * 113.61826 * 270.79639 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9508 -2.5094 0.5040 8 7 2.0672 -2.6655 2.4171 9 6 1.6730 -4.0666 2.5836 10 1 0.7587 -4.3160 2.0452 11 6 2.8194 -5.0635 2.3453 12 6 2.2699 -5.8604 3.5402 13 1 1.5187 -6.6006 3.2647 14 7 3.3136 -6.4060 4.4116 15 6 3.5702 -7.7291 4.4086 16 8 2.9360 -8.4697 3.6825 17 6 4.6229 -8.2794 5.2868 18 6 4.8904 -9.6498 5.2861 19 6 5.8778 -10.1572 6.1035 20 6 6.1716 -11.6352 6.0996 21 8 5.6388 -12.2299 7.2846 22 14 8.0148 -11.9019 6.0457 23 6 6.6006 -9.3102 6.9293 24 9 7.5668 -9.8127 7.7289 25 6 6.3349 -7.9492 6.9386 26 6 5.3499 -7.4314 6.1253 27 6 1.6735 -4.5369 4.0477 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 -0.0005 31 1 3.1301 1.4424 -0.0005 32 1 1.6768 1.9563 -0.8900 33 1 1.6768 1.9563 0.8900 34 1 1.6766 -1.7490 -1.2493 35 1 1.6767 -0.2074 -2.1393 36 1 3.1300 -0.7217 -1.2491 37 1 2.6262 -2.2364 3.0836 38 1 3.8089 -4.6410 2.5202 39 1 2.7465 -5.5940 1.3959 40 1 3.8199 -5.8151 4.9906 41 1 4.3282 -10.3104 4.6428 42 1 5.7123 -12.0947 5.2243 43 1 5.7909 -13.1827 7.3492 44 1 8.6528 -11.2801 7.2337 45 1 8.3167 -13.3554 6.0093 46 1 6.9006 -7.2938 7.5841 47 1 5.1435 -6.3714 6.1336 48 1 0.6753 -4.6423 4.4727 49 1 2.3491 -3.9711 4.6892 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_12496548.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:26:29 Heat of formation + Delta-G solvation = -124.822630 kcal Electronic energy + Delta-G solvation = -32497.194779 eV Core-core repulsion = 27728.043984 eV Total energy + Delta-G solvation = -4769.150795 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.167 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -50.31615 -41.92582 -41.45029 -40.38132 -39.23864 -37.86216 -37.71991 -35.54928 -34.94221 -33.72056 -32.84633 -31.82164 -28.33107 -28.28641 -27.10419 -26.97224 -26.39431 -24.63245 -23.44052 -22.90616 -21.67991 -21.29335 -20.80252 -19.20584 -18.96949 -18.78871 -18.57863 -18.19490 -17.72008 -17.14736 -17.07790 -16.86955 -16.48234 -16.22780 -16.00418 -15.80802 -15.43231 -15.33973 -15.28495 -15.06457 -14.85033 -14.64160 -14.35907 -14.12270 -14.02482 -13.79790 -13.75295 -13.45470 -13.43002 -13.13868 -12.89717 -12.86730 -12.82872 -12.59755 -12.51839 -12.39638 -12.31904 -12.19602 -12.05087 -11.32611 -11.30057 -11.04878 -10.96769 -10.79219 -10.32637 -10.18506 -10.10240 -9.81985 -4.97051 -0.52176 -0.05894 1.14860 1.20148 1.55916 1.59976 1.86075 1.96429 2.00674 2.49647 2.98686 3.09131 3.11741 3.22185 3.33675 3.48666 3.50914 3.60293 3.68179 3.71368 3.77689 3.83207 3.83525 3.97068 4.06664 4.16934 4.39403 4.41601 4.44038 4.53997 4.56153 4.63014 4.65645 4.66250 4.70288 4.78105 4.79970 4.84647 4.88545 4.92988 4.93257 4.94933 5.03065 5.08254 5.22720 5.36024 5.36773 5.46636 5.53847 5.59120 6.30719 6.33680 6.39322 7.06846 7.41082 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.651 3.349 7 O -0.564 6.564 8 N -0.700 5.700 9 C 0.144 3.856 10 H 0.125 0.875 11 C -0.166 4.166 12 C 0.128 3.872 13 H 0.125 0.875 14 N -0.715 5.715 15 C 0.565 3.435 16 O -0.528 6.528 17 C -0.149 4.149 18 C -0.009 4.009 19 C -0.115 4.115 20 C -0.075 4.075 21 O -0.533 6.533 22 Si 0.672 3.328 23 C 0.136 3.864 24 F -0.118 7.118 25 C -0.158 4.158 26 C -0.052 4.052 27 C -0.153 4.153 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.406 0.594 38 H 0.092 0.908 39 H 0.083 0.917 40 H 0.401 0.599 41 H 0.150 0.850 42 H 0.082 0.918 43 H 0.383 0.617 44 H -0.227 1.227 45 H -0.264 1.264 46 H 0.147 0.853 47 H 0.138 0.862 48 H 0.089 0.911 49 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.508 4.251 0.600 4.972 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.453 6.453 8 N -0.359 5.359 9 C 0.039 3.961 10 H 0.143 0.857 11 C -0.206 4.206 12 C 0.022 3.978 13 H 0.143 0.857 14 N -0.366 5.366 15 C 0.352 3.648 16 O -0.405 6.405 17 C -0.152 4.152 18 C -0.028 4.028 19 C -0.116 4.116 20 C -0.184 4.184 21 O -0.341 6.341 22 Si 0.571 3.429 23 C 0.116 3.884 24 F -0.096 7.096 25 C -0.176 4.176 26 C -0.071 4.071 27 C -0.192 4.192 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.242 0.758 38 H 0.110 0.890 39 H 0.102 0.898 40 H 0.237 0.763 41 H 0.168 0.832 42 H 0.100 0.900 43 H 0.232 0.768 44 H -0.151 1.151 45 H -0.189 1.189 46 H 0.165 0.835 47 H 0.156 0.844 48 H 0.108 0.892 49 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 2.228 3.788 0.138 4.397 hybrid contribution 0.030 -0.397 1.342 1.400 sum 2.258 3.391 1.480 4.335 Atomic orbital electron populations 1.22523 0.93821 1.05066 1.02724 1.22123 0.94458 0.91547 0.81856 1.21878 1.02318 0.92361 1.03343 1.22524 1.01596 1.03472 0.96538 1.86302 1.71488 1.23441 1.46766 1.18158 0.78619 0.80570 0.82247 1.90925 1.40848 1.70499 1.43026 1.44657 1.55478 1.11995 1.23750 1.22283 0.99339 0.77744 0.96708 0.85680 1.24051 0.99440 0.97160 0.99951 1.22274 0.90799 0.94234 0.90485 0.85738 1.45791 1.38797 1.07824 1.44223 1.18124 0.82602 0.82131 0.81906 1.90823 1.50116 1.58391 1.41154 1.19919 0.99896 0.94486 1.00908 1.21015 0.92589 0.94081 0.95101 1.19220 0.98567 0.94323 0.99467 1.24663 1.11692 0.91388 0.90611 1.86597 1.79279 1.27012 1.41195 0.95499 0.75828 0.83028 0.88507 1.17899 0.87813 0.92209 0.90458 1.91571 1.59713 1.86929 1.71393 1.21108 1.00687 0.93393 1.02454 1.21160 0.93201 0.99713 0.93025 1.23808 1.03192 0.95777 0.96459 0.92121 0.90922 0.89410 0.91406 0.89926 0.91402 0.89401 0.90922 0.92129 0.75849 0.88988 0.89813 0.76298 0.83244 0.89967 0.76849 1.15076 1.18918 0.83511 0.84422 0.89215 0.88693 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 2 C 0.14 0.13 1.13 -90.62 -0.10 0.03 16 3 C -0.14 0.15 8.85 37.16 0.33 0.47 16 4 C -0.18 -0.20 8.37 37.16 0.31 0.11 16 5 O -0.37 -0.67 9.94 -40.31 -0.40 -1.07 16 6 C 0.65 1.37 8.06 54.06 0.44 1.81 16 7 O -0.56 -2.60 11.48 -19.28 -0.22 -2.82 16 8 N -0.70 0.86 5.36 -57.94 -0.31 0.55 16 9 C 0.14 -0.28 4.24 -67.12 -0.28 -0.57 16 10 H 0.13 -0.06 7.46 -51.93 -0.39 -0.44 16 11 C -0.17 0.33 7.68 -25.92 -0.20 0.13 16 12 C 0.13 -0.28 4.24 -67.12 -0.28 -0.57 16 13 H 0.12 -0.07 7.46 -51.93 -0.39 -0.46 16 14 N -0.71 1.73 5.31 -54.00 -0.29 1.44 16 15 C 0.56 0.44 7.77 -12.39 -0.10 0.35 16 16 O -0.53 -2.44 15.94 5.31 0.08 -2.36 16 17 C -0.15 0.04 5.87 -104.97 -0.62 -0.58 16 18 C -0.01 -0.01 9.21 -39.20 -0.36 -0.37 16 19 C -0.11 -0.10 4.80 -104.62 -0.50 -0.60 16 20 C -0.07 -0.01 2.79 36.00 0.10 0.09 16 21 O -0.53 -0.82 12.85 -35.23 -0.45 -1.27 16 22 Si 0.67 -0.17 30.77 -169.99 -5.23 -5.41 16 23 C 0.14 0.13 6.67 -39.27 -0.26 -0.13 16 24 F -0.12 -0.32 12.84 2.25 0.03 -0.29 16 25 C -0.16 0.22 10.01 -39.57 -0.40 -0.18 16 26 C -0.05 0.13 9.54 -39.20 -0.37 -0.24 16 27 C -0.15 0.62 7.58 -25.92 -0.20 0.43 16 28 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 29 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.09 0.27 5.88 -51.93 -0.31 -0.03 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 36 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 37 H 0.41 -1.42 8.84 -40.82 -0.36 -1.78 16 38 H 0.09 -0.24 8.14 -51.92 -0.42 -0.67 16 39 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 40 H 0.40 -2.13 6.76 -40.82 -0.28 -2.40 16 41 H 0.15 0.07 7.58 -52.49 -0.40 -0.32 16 42 H 0.08 -0.14 7.77 -51.93 -0.40 -0.54 16 43 H 0.38 -0.93 8.74 45.56 0.40 -0.53 16 44 H -0.23 -0.61 5.33 56.52 0.30 -0.31 16 45 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 46 H 0.15 -0.50 8.06 -52.49 -0.42 -0.92 16 47 H 0.14 -0.82 6.40 -52.49 -0.34 -1.16 16 48 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 49 H 0.09 -0.55 8.10 -51.93 -0.42 -0.97 16 LS Contribution 402.47 15.07 6.07 6.07 Total: 0.00 -9.89 402.47 -10.04 -19.94 By element: Atomic # 1 Polarization: -7.95 SS G_CDS: -7.13 Total: -15.08 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: -2.19 Total: 0.30 kcal Atomic # 7 Polarization: 2.59 SS G_CDS: -0.60 Total: 1.99 kcal Atomic # 8 Polarization: -6.53 SS G_CDS: -0.99 Total: -7.52 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.03 Total: -0.29 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.23 Total: -5.41 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -9.89 -10.04 -19.94 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_12496548.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.887 kcal (2) G-P(sol) polarization free energy of solvation -9.894 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.781 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.042 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.936 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds