Wall clock time and date at job start Sun Mar 7 2021 00:27:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34652 * 124.85264 * 2 1 4 4 C 1.36774 * 108.39860 * 179.97438 * 3 2 1 5 5 C 1.47264 * 126.94099 * 179.97438 * 4 3 2 6 6 O 1.21629 * 119.99645 * 180.02562 * 5 4 3 7 7 N 1.34770 * 120.00112 * 0.03130 * 5 4 3 8 8 C 1.46507 * 119.99879 * 179.97438 * 7 5 4 9 9 H 1.08996 * 112.85008 * 336.19617 * 8 7 5 10 10 C 1.53773 * 113.68975 * 107.46500 * 8 7 5 11 11 C 1.53782 * 87.08151 * 139.99146 * 10 8 7 12 12 H 1.08994 * 113.69034 * 89.12874 * 11 10 8 13 13 N 1.46505 * 113.61463 * 220.01941 * 11 10 8 14 14 C 1.34780 * 119.99900 * 252.49797 * 13 11 10 15 15 O 1.21508 * 120.00004 * 359.97438 * 14 13 11 16 16 O 1.34639 * 120.00005 * 179.97438 * 14 13 11 17 17 C 1.45194 * 116.99841 * 179.97438 * 16 14 13 18 18 C 1.52997 * 109.47339 * 60.00459 * 17 16 14 19 19 C 1.53006 * 109.47359 * 300.00176 * 17 16 14 20 20 C 1.52999 * 109.46968 * 180.02562 * 17 16 14 21 21 C 1.53780 * 113.61039 * 204.99978 * 8 7 5 22 22 C 1.46691 * 106.11392 * 0.26830 * 4 3 2 23 23 C 1.34485 * 106.33270 * 359.56285 * 22 4 3 24 24 C 1.50697 * 125.57476 * 180.14861 * 23 22 4 25 25 O 1.42898 * 109.47217 * 210.33793 * 24 23 22 26 26 Si 1.86303 * 109.46911 * 330.33947 * 24 23 22 27 27 H 1.08996 * 109.47724 * 90.02019 * 1 2 3 28 28 H 1.09006 * 109.47064 * 210.02102 * 1 2 3 29 29 H 1.09003 * 109.46757 * 330.01270 * 1 2 3 30 30 H 1.07997 * 125.80260 * 0.02562 * 3 2 1 31 31 H 0.97003 * 120.00377 * 359.97438 * 7 5 4 32 32 H 1.09004 * 113.61844 * 25.44270 * 10 8 7 33 33 H 1.09004 * 113.61548 * 254.54081 * 10 8 7 34 34 H 0.97001 * 120.00330 * 72.49334 * 13 11 10 35 35 H 1.09002 * 109.47153 * 59.99705 * 18 17 16 36 36 H 1.09001 * 109.46832 * 299.99896 * 18 17 16 37 37 H 1.09004 * 109.47261 * 179.97438 * 18 17 16 38 38 H 1.08993 * 109.46955 * 180.02562 * 19 17 16 39 39 H 1.09000 * 109.47050 * 300.00254 * 19 17 16 40 40 H 1.09001 * 109.47002 * 59.99988 * 19 17 16 41 41 H 1.09002 * 109.46716 * 299.99800 * 20 17 16 42 42 H 1.09000 * 109.47486 * 59.99718 * 20 17 16 43 43 H 1.09001 * 109.47362 * 180.02562 * 20 17 16 44 44 H 1.09000 * 113.61219 * 105.39321 * 21 8 7 45 45 H 1.08993 * 113.62050 * 334.48028 * 21 8 7 46 46 H 1.07995 * 126.83286 * 179.74352 * 22 4 3 47 47 H 1.08997 * 109.46893 * 90.33569 * 24 23 22 48 48 H 0.96701 * 114.00031 * 60.00375 * 25 24 23 49 49 H 1.48504 * 109.99840 * 58.68079 * 26 24 23 50 50 H 1.48502 * 109.99928 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5462 0.7176 0.0006 5 6 4.7284 1.5957 0.0003 6 8 5.8447 1.1127 0.0004 7 7 4.5734 2.9345 -0.0001 8 6 5.7495 3.8080 0.0002 9 1 6.6371 3.3227 0.4060 10 6 5.9940 4.5154 -1.3431 11 6 6.3691 5.7641 -0.5276 12 1 7.4259 5.8149 -0.2656 13 7 5.8647 7.0138 -1.1024 14 6 6.7156 7.8743 -1.6958 15 8 7.9010 7.6138 -1.7536 16 8 6.2521 9.0225 -2.2245 17 6 7.2254 9.9016 -2.8472 18 6 7.9129 9.1666 -3.9996 19 6 8.2719 10.3188 -1.8118 20 6 6.5173 11.1463 -3.3859 21 6 5.4823 5.2006 0.5953 22 6 3.5375 -0.7493 -0.0056 23 6 2.2447 -1.1199 0.0004 24 6 1.7397 -2.5397 0.0005 25 8 0.4810 -2.5976 -0.6735 26 14 2.9651 -3.6347 -0.8771 27 1 -0.3634 -0.0004 -1.0276 28 1 -0.3633 -0.8898 0.5142 29 1 -0.3633 0.8901 0.5137 30 1 1.8767 2.1240 0.0004 31 1 3.6832 3.3197 -0.0004 32 1 5.0917 4.6397 -1.9418 33 1 6.8259 4.0987 -1.9110 34 1 4.9184 7.2218 -1.0560 35 1 7.1674 8.8695 -4.7372 36 1 8.4174 8.2800 -3.6154 37 1 8.6434 9.8268 -4.4673 38 1 9.0023 10.9791 -2.2792 39 1 7.7821 10.8424 -0.9908 40 1 8.7764 9.4322 -1.4277 41 1 5.7716 10.8494 -4.1234 42 1 6.0277 11.6699 -2.5647 43 1 7.2479 11.8061 -3.8538 44 1 5.9012 5.3370 1.5923 45 1 4.4402 5.5122 0.5266 46 1 4.3980 -1.4018 -0.0108 47 1 1.6176 -2.8818 1.0282 48 1 0.5146 -2.3068 -1.5951 49 1 4.2869 -3.5586 -0.2045 50 1 2.4790 -5.0379 -0.8833 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_13287730.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:27:14 Heat of formation + Delta-G solvation = -69.138154 kcal Electronic energy + Delta-G solvation = -30904.535939 eV Core-core repulsion = 26514.516390 eV Total energy + Delta-G solvation = -4390.019549 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.50619 -41.80251 -40.83434 -39.30408 -37.86982 -37.72545 -35.41854 -34.77186 -33.89149 -33.28476 -31.33576 -28.31025 -28.26326 -27.86821 -26.87472 -26.55364 -25.63626 -23.83188 -22.61992 -21.54117 -21.05014 -20.71322 -20.48452 -19.19074 -18.89804 -18.00142 -17.41380 -17.11835 -17.03826 -16.93801 -16.85597 -16.18461 -15.78327 -15.67883 -15.47380 -15.38456 -15.33541 -15.20494 -14.81917 -14.51193 -14.27674 -14.09982 -13.86829 -13.66035 -13.53554 -13.41080 -13.35255 -13.27243 -13.09319 -12.83991 -12.80554 -12.53783 -12.41842 -12.34643 -12.22305 -12.14826 -11.96789 -11.94934 -11.27261 -10.93066 -10.82865 -10.77220 -10.20375 -9.94996 -9.59777 -9.24356 -5.02002 0.73432 1.03185 1.20038 1.38573 1.63247 1.83432 1.90234 2.01870 2.29735 2.64774 3.15530 3.16507 3.31713 3.45083 3.51304 3.71684 3.74465 3.79249 3.79945 3.81401 3.85666 3.99366 4.09799 4.18115 4.33943 4.41565 4.47385 4.49415 4.52455 4.54211 4.58131 4.65005 4.72009 4.75047 4.80123 4.84621 4.90348 4.95536 4.96762 4.98325 5.06029 5.10725 5.32339 5.39232 5.48922 5.54308 5.62346 5.67517 5.93396 6.10676 6.31783 6.43240 6.62867 7.44160 7.45439 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.425 5.425 3 C 0.051 3.949 4 C -0.227 4.227 5 C 0.593 3.407 6 O -0.540 6.540 7 N -0.720 5.720 8 C 0.130 3.870 9 H 0.123 0.877 10 C -0.166 4.166 11 C 0.143 3.857 12 H 0.125 0.875 13 N -0.700 5.700 14 C 0.650 3.350 15 O -0.564 6.564 16 O -0.366 6.366 17 C 0.137 3.863 18 C -0.184 4.184 19 C -0.184 4.184 20 C -0.142 4.142 21 C -0.153 4.153 22 C -0.136 4.136 23 C -0.019 4.019 24 C -0.043 4.043 25 O -0.544 6.544 26 Si 0.714 3.286 27 H 0.078 0.922 28 H 0.099 0.901 29 H 0.080 0.920 30 H 0.170 0.830 31 H 0.397 0.603 32 H 0.090 0.910 33 H 0.082 0.918 34 H 0.406 0.594 35 H 0.059 0.941 36 H 0.088 0.912 37 H 0.072 0.928 38 H 0.072 0.928 39 H 0.060 0.940 40 H 0.087 0.913 41 H 0.067 0.933 42 H 0.067 0.933 43 H 0.082 0.918 44 H 0.088 0.912 45 H 0.093 0.907 46 H 0.152 0.848 47 H 0.118 0.882 48 H 0.380 0.620 49 H -0.251 1.251 50 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.272 3.007 -1.688 8.048 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.099 5.099 3 C -0.085 4.085 4 C -0.237 4.237 5 C 0.382 3.618 6 O -0.417 6.417 7 N -0.371 5.371 8 C 0.025 3.975 9 H 0.140 0.860 10 C -0.206 4.206 11 C 0.039 3.961 12 H 0.143 0.857 13 N -0.359 5.359 14 C 0.404 3.596 15 O -0.453 6.453 16 O -0.280 6.280 17 C 0.100 3.900 18 C -0.241 4.241 19 C -0.241 4.241 20 C -0.199 4.199 21 C -0.192 4.192 22 C -0.160 4.160 23 C -0.128 4.128 24 C -0.153 4.153 25 O -0.350 6.350 26 Si 0.614 3.386 27 H 0.096 0.904 28 H 0.118 0.882 29 H 0.099 0.901 30 H 0.187 0.813 31 H 0.232 0.768 32 H 0.109 0.891 33 H 0.101 0.899 34 H 0.241 0.759 35 H 0.079 0.921 36 H 0.106 0.894 37 H 0.091 0.909 38 H 0.091 0.909 39 H 0.079 0.921 40 H 0.106 0.894 41 H 0.086 0.914 42 H 0.086 0.914 43 H 0.101 0.899 44 H 0.106 0.894 45 H 0.112 0.888 46 H 0.170 0.830 47 H 0.135 0.865 48 H 0.227 0.773 49 H -0.175 1.175 50 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges -5.864 1.656 -1.109 6.194 hybrid contribution -1.204 0.869 0.546 1.582 sum -7.069 2.525 -0.562 7.527 Atomic orbital electron populations 1.22268 0.76185 1.05060 1.04002 1.43479 1.07019 1.04915 1.54506 1.21900 0.90081 0.91762 1.04795 1.20299 0.91487 0.93935 1.18023 1.17425 0.88099 0.81292 0.75026 1.90797 1.25847 1.75126 1.49888 1.45715 1.09043 1.05729 1.76632 1.22180 0.90477 0.88444 0.96447 0.85960 1.24045 1.03135 0.95520 0.97896 1.22312 1.00065 0.80250 0.93517 0.85748 1.44680 1.10728 1.19922 1.60522 1.18163 0.84436 0.79787 0.77247 1.90923 1.14967 1.77221 1.62195 1.86301 1.42267 1.29717 1.69765 1.22115 0.87345 0.88110 0.92418 1.22522 1.01358 1.02842 0.97408 1.22524 0.99017 1.03649 0.98942 1.21878 1.01382 0.94916 1.01713 1.23801 1.01069 0.94858 0.99495 1.21740 0.94984 0.93271 1.06027 1.20812 0.90575 0.89089 1.12353 1.24820 0.93602 0.94803 1.02103 1.86475 1.29804 1.89498 1.29183 0.94088 0.76842 0.77720 0.89965 0.90364 0.88240 0.90079 0.81255 0.76818 0.89133 0.89949 0.75908 0.92145 0.89373 0.90942 0.90936 0.92141 0.89397 0.91428 0.91417 0.89938 0.89378 0.88849 0.83045 0.86521 0.77262 1.17512 1.17685 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.26 9.81 59.85 0.59 0.33 16 2 N -0.42 0.58 3.09 -119.90 -0.37 0.21 16 3 C 0.05 -0.07 10.83 -16.84 -0.18 -0.26 16 4 C -0.23 -0.37 6.29 -103.35 -0.65 -1.02 16 5 C 0.59 1.75 7.81 -12.60 -0.10 1.65 16 6 O -0.54 -3.92 16.57 5.25 0.09 -3.84 16 7 N -0.72 0.63 5.35 -54.14 -0.29 0.34 16 8 C 0.13 -0.12 4.24 -67.12 -0.28 -0.40 16 9 H 0.12 0.13 7.46 -51.93 -0.39 -0.26 16 10 C -0.17 0.14 7.68 -25.92 -0.20 -0.06 16 11 C 0.14 -0.15 4.24 -67.11 -0.28 -0.44 16 12 H 0.12 0.05 7.46 -51.93 -0.39 -0.33 16 13 N -0.70 0.40 5.36 -57.93 -0.31 0.09 16 14 C 0.65 1.72 8.06 54.06 0.44 2.15 16 15 O -0.56 -2.91 11.48 -19.28 -0.22 -3.13 16 16 O -0.37 -0.83 9.94 -40.32 -0.40 -1.23 16 17 C 0.14 0.18 1.13 -90.62 -0.10 0.08 16 18 C -0.18 -0.27 8.37 37.16 0.31 0.04 16 19 C -0.18 -0.25 8.37 37.16 0.31 0.06 16 20 C -0.14 0.11 8.85 37.16 0.33 0.44 16 21 C -0.15 0.47 7.58 -25.92 -0.20 0.27 16 22 C -0.14 -0.28 9.49 -37.50 -0.36 -0.64 16 23 C -0.02 0.00 6.14 -81.86 -0.50 -0.50 16 24 C -0.04 0.05 2.87 36.00 0.10 0.15 16 25 O -0.54 1.08 10.32 -35.23 -0.36 0.71 16 26 Si 0.71 -0.84 31.28 -169.99 -5.32 -6.16 16 27 H 0.08 -0.41 8.14 -51.93 -0.42 -0.83 16 28 H 0.10 -0.30 6.73 -51.93 -0.35 -0.65 16 29 H 0.08 -0.43 8.13 -51.93 -0.42 -0.85 16 30 H 0.17 -0.87 7.45 -52.49 -0.39 -1.26 16 31 H 0.40 -1.57 7.67 -40.82 -0.31 -1.88 16 32 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 33 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 34 H 0.41 -1.16 8.84 -40.82 -0.36 -1.53 16 35 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 36 H 0.09 0.32 5.88 -51.93 -0.31 0.02 16 37 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 39 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 40 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 41 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 42 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 43 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 44 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 45 H 0.09 -0.45 8.09 -51.93 -0.42 -0.87 16 46 H 0.15 0.41 6.66 -52.49 -0.35 0.06 16 47 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 48 H 0.38 -2.00 8.70 45.56 0.40 -1.61 16 49 H -0.25 -0.43 6.78 56.52 0.38 -0.05 16 50 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 LS Contribution 405.51 15.07 6.11 6.11 Total: 0.00 -10.53 405.51 -9.73 -20.26 By element: Atomic # 1 Polarization: -7.36 SS G_CDS: -7.88 Total: -15.24 kcal Atomic # 6 Polarization: 2.64 SS G_CDS: -0.78 Total: 1.86 kcal Atomic # 7 Polarization: 1.61 SS G_CDS: -0.97 Total: 0.64 kcal Atomic # 8 Polarization: -6.58 SS G_CDS: -0.90 Total: -7.48 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.32 Total: -6.16 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -10.53 -9.73 -20.26 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_13287730.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.881 kcal (2) G-P(sol) polarization free energy of solvation -10.526 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.731 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.257 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.138 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds