Wall clock time and date at job start Sun Mar 7 2021 00:27:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34652 * 124.85264 * 2 1 4 4 C 1.36774 * 108.39860 * 179.97438 * 3 2 1 5 5 C 1.47264 * 126.94099 * 179.97438 * 4 3 2 6 6 O 1.21629 * 119.99645 * 180.02562 * 5 4 3 7 7 N 1.34770 * 120.00112 * 0.03130 * 5 4 3 8 8 C 1.46507 * 119.99879 * 179.97438 * 7 5 4 9 9 H 1.08996 * 112.85008 * 336.19617 * 8 7 5 10 10 C 1.53773 * 113.68975 * 107.46500 * 8 7 5 11 11 C 1.53782 * 87.08151 * 139.99146 * 10 8 7 12 12 H 1.08994 * 113.69034 * 89.12874 * 11 10 8 13 13 N 1.46505 * 113.61463 * 220.01941 * 11 10 8 14 14 C 1.34780 * 119.99900 * 252.49797 * 13 11 10 15 15 O 1.21508 * 120.00004 * 359.97438 * 14 13 11 16 16 O 1.34639 * 120.00005 * 179.97438 * 14 13 11 17 17 C 1.45194 * 116.99841 * 179.97438 * 16 14 13 18 18 C 1.52997 * 109.47339 * 60.00459 * 17 16 14 19 19 C 1.53006 * 109.47359 * 300.00176 * 17 16 14 20 20 C 1.52999 * 109.46968 * 180.02562 * 17 16 14 21 21 C 1.53780 * 113.61039 * 204.99978 * 8 7 5 22 22 C 1.46691 * 106.11392 * 0.26830 * 4 3 2 23 23 C 1.34485 * 106.33270 * 359.56285 * 22 4 3 24 24 C 1.50697 * 125.57476 * 180.14861 * 23 22 4 25 25 O 1.42898 * 109.47217 * 210.33793 * 24 23 22 26 26 Si 1.86303 * 109.46911 * 330.33947 * 24 23 22 27 27 H 1.08996 * 109.47724 * 90.02019 * 1 2 3 28 28 H 1.09006 * 109.47064 * 210.02102 * 1 2 3 29 29 H 1.09003 * 109.46757 * 330.01270 * 1 2 3 30 30 H 1.07997 * 125.80260 * 0.02562 * 3 2 1 31 31 H 0.97003 * 120.00377 * 359.97438 * 7 5 4 32 32 H 1.09004 * 113.61844 * 25.44270 * 10 8 7 33 33 H 1.09004 * 113.61548 * 254.54081 * 10 8 7 34 34 H 0.97001 * 120.00330 * 72.49334 * 13 11 10 35 35 H 1.09002 * 109.47153 * 59.99705 * 18 17 16 36 36 H 1.09001 * 109.46832 * 299.99896 * 18 17 16 37 37 H 1.09004 * 109.47261 * 179.97438 * 18 17 16 38 38 H 1.08993 * 109.46955 * 180.02562 * 19 17 16 39 39 H 1.09000 * 109.47050 * 300.00254 * 19 17 16 40 40 H 1.09001 * 109.47002 * 59.99988 * 19 17 16 41 41 H 1.09002 * 109.46716 * 299.99800 * 20 17 16 42 42 H 1.09000 * 109.47486 * 59.99718 * 20 17 16 43 43 H 1.09001 * 109.47362 * 180.02562 * 20 17 16 44 44 H 1.09000 * 113.61219 * 105.39321 * 21 8 7 45 45 H 1.08993 * 113.62050 * 334.48028 * 21 8 7 46 46 H 1.07995 * 126.83286 * 179.74352 * 22 4 3 47 47 H 1.08997 * 109.46893 * 90.33569 * 24 23 22 48 48 H 0.96701 * 114.00031 * 60.00375 * 25 24 23 49 49 H 1.48504 * 109.99840 * 58.68079 * 26 24 23 50 50 H 1.48502 * 109.99928 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5462 0.7176 0.0006 5 6 4.7284 1.5957 0.0003 6 8 5.8447 1.1127 0.0004 7 7 4.5734 2.9345 -0.0001 8 6 5.7495 3.8080 0.0002 9 1 6.6371 3.3227 0.4060 10 6 5.9940 4.5154 -1.3431 11 6 6.3691 5.7641 -0.5276 12 1 7.4259 5.8149 -0.2656 13 7 5.8647 7.0138 -1.1024 14 6 6.7156 7.8743 -1.6958 15 8 7.9010 7.6138 -1.7536 16 8 6.2521 9.0225 -2.2245 17 6 7.2254 9.9016 -2.8472 18 6 7.9129 9.1666 -3.9996 19 6 8.2719 10.3188 -1.8118 20 6 6.5173 11.1463 -3.3859 21 6 5.4823 5.2006 0.5953 22 6 3.5375 -0.7493 -0.0056 23 6 2.2447 -1.1199 0.0004 24 6 1.7397 -2.5397 0.0005 25 8 0.4810 -2.5976 -0.6735 26 14 2.9651 -3.6347 -0.8771 27 1 -0.3634 -0.0004 -1.0276 28 1 -0.3633 -0.8898 0.5142 29 1 -0.3633 0.8901 0.5137 30 1 1.8767 2.1240 0.0004 31 1 3.6832 3.3197 -0.0004 32 1 5.0917 4.6397 -1.9418 33 1 6.8259 4.0987 -1.9110 34 1 4.9184 7.2218 -1.0560 35 1 7.1674 8.8695 -4.7372 36 1 8.4174 8.2800 -3.6154 37 1 8.6434 9.8268 -4.4673 38 1 9.0023 10.9791 -2.2792 39 1 7.7821 10.8424 -0.9908 40 1 8.7764 9.4322 -1.4277 41 1 5.7716 10.8494 -4.1234 42 1 6.0277 11.6699 -2.5647 43 1 7.2479 11.8061 -3.8538 44 1 5.9012 5.3370 1.5923 45 1 4.4402 5.5122 0.5266 46 1 4.3980 -1.4018 -0.0108 47 1 1.6176 -2.8818 1.0282 48 1 0.5146 -2.3068 -1.5951 49 1 4.2869 -3.5586 -0.2045 50 1 2.4790 -5.0379 -0.8833 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941094_13287730.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:27:13 Heat of formation + Delta-G solvation = -72.195489 kcal Electronic energy + Delta-G solvation = -30904.668515 eV Core-core repulsion = 26514.516390 eV Total energy + Delta-G solvation = -4390.152125 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.45810 -41.91330 -40.88944 -39.43177 -37.90440 -37.71288 -35.56540 -34.87175 -33.82659 -33.29765 -31.28596 -28.37407 -28.30129 -27.71491 -26.77453 -26.51537 -25.61890 -23.87086 -22.66832 -21.57626 -21.12131 -20.71233 -20.45003 -19.25039 -18.87075 -18.04312 -17.33500 -17.21111 -17.16955 -16.89969 -16.76290 -16.21105 -15.84773 -15.65695 -15.49186 -15.41663 -15.33876 -15.25467 -14.76374 -14.60572 -14.35296 -14.09119 -13.88471 -13.49887 -13.42073 -13.36007 -13.21874 -13.15303 -13.05331 -12.92645 -12.86769 -12.58480 -12.46106 -12.37678 -12.19299 -12.16050 -12.09671 -11.96452 -11.39770 -11.11355 -11.00635 -10.74609 -10.24656 -10.03466 -9.57083 -9.20536 -5.00492 0.74776 1.03003 1.14219 1.39932 1.62215 1.73388 1.89074 2.06053 2.30481 2.53608 3.17030 3.34928 3.36615 3.52082 3.57141 3.74131 3.79014 3.84211 3.87050 3.90038 3.94264 3.99602 4.32242 4.38430 4.44553 4.46924 4.55935 4.58887 4.60710 4.64458 4.67653 4.74497 4.76144 4.82288 4.85255 4.87423 4.87641 4.93076 4.94176 5.00687 5.04222 5.14993 5.26714 5.29212 5.39556 5.55736 5.59713 5.64799 5.96863 6.25820 6.40711 6.62516 6.66917 7.34678 7.35955 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.422 5.422 3 C 0.080 3.920 4 C -0.263 4.263 5 C 0.588 3.412 6 O -0.599 6.599 7 N -0.699 5.699 8 C 0.125 3.875 9 H 0.096 0.904 10 C -0.160 4.160 11 C 0.140 3.860 12 H 0.103 0.897 13 N -0.684 5.684 14 C 0.642 3.358 15 O -0.596 6.596 16 O -0.367 6.367 17 C 0.128 3.872 18 C -0.181 4.181 19 C -0.181 4.181 20 C -0.137 4.137 21 C -0.128 4.128 22 C -0.169 4.169 23 C -0.015 4.015 24 C -0.032 4.032 25 O -0.546 6.546 26 Si 0.782 3.218 27 H 0.097 0.903 28 H 0.091 0.909 29 H 0.103 0.897 30 H 0.215 0.785 31 H 0.417 0.583 32 H 0.106 0.894 33 H 0.057 0.943 34 H 0.420 0.580 35 H 0.062 0.938 36 H 0.062 0.938 37 H 0.086 0.914 38 H 0.085 0.915 39 H 0.063 0.937 40 H 0.062 0.938 41 H 0.070 0.930 42 H 0.071 0.929 43 H 0.097 0.903 44 H 0.093 0.907 45 H 0.125 0.875 46 H 0.129 0.871 47 H 0.115 0.885 48 H 0.396 0.604 49 H -0.301 1.301 50 H -0.285 1.285 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.752 5.153 -1.904 12.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.095 5.095 3 C -0.058 4.058 4 C -0.273 4.273 5 C 0.378 3.622 6 O -0.481 6.481 7 N -0.351 5.351 8 C 0.018 3.982 9 H 0.114 0.886 10 C -0.201 4.201 11 C 0.036 3.964 12 H 0.121 0.879 13 N -0.343 5.343 14 C 0.396 3.604 15 O -0.487 6.487 16 O -0.282 6.282 17 C 0.091 3.909 18 C -0.238 4.238 19 C -0.238 4.238 20 C -0.194 4.194 21 C -0.166 4.166 22 C -0.194 4.194 23 C -0.124 4.124 24 C -0.144 4.144 25 O -0.353 6.353 26 Si 0.687 3.313 27 H 0.115 0.885 28 H 0.109 0.891 29 H 0.121 0.879 30 H 0.231 0.769 31 H 0.255 0.745 32 H 0.124 0.876 33 H 0.076 0.924 34 H 0.258 0.742 35 H 0.081 0.919 36 H 0.081 0.919 37 H 0.104 0.896 38 H 0.104 0.896 39 H 0.082 0.918 40 H 0.081 0.919 41 H 0.089 0.911 42 H 0.090 0.910 43 H 0.116 0.884 44 H 0.111 0.889 45 H 0.144 0.856 46 H 0.146 0.854 47 H 0.132 0.868 48 H 0.246 0.754 49 H -0.228 1.228 50 H -0.212 1.212 Dipole moment (debyes) X Y Z Total from point charges -9.440 3.844 -1.344 10.281 hybrid contribution -0.114 0.169 0.601 0.634 sum -9.554 4.013 -0.743 10.389 Atomic orbital electron populations 1.22502 0.74059 1.05789 1.05465 1.43725 1.08193 1.04336 1.53259 1.22436 0.88621 0.93368 1.01329 1.20283 0.92510 0.93485 1.20975 1.17753 0.87733 0.82432 0.74252 1.90762 1.28052 1.76305 1.52988 1.45503 1.10018 1.04468 1.75077 1.22088 0.89914 0.89288 0.96861 0.88635 1.24011 1.02890 0.95368 0.97787 1.22241 0.99690 0.79968 0.94518 0.87853 1.44611 1.11123 1.19220 1.59387 1.18450 0.84437 0.80164 0.77372 1.90916 1.16495 1.77862 1.63420 1.86306 1.42511 1.29633 1.69747 1.22338 0.87607 0.88726 0.92200 1.22476 1.01581 1.02154 0.97568 1.22478 0.99290 1.02763 0.99240 1.21887 1.01695 0.93941 1.01889 1.23702 1.02349 0.91945 0.98636 1.21727 0.95442 0.94020 1.08190 1.20760 0.90054 0.90006 1.11629 1.24615 0.93749 0.94070 1.01927 1.86455 1.28796 1.89549 1.30545 0.93285 0.73580 0.75489 0.88900 0.88499 0.89075 0.87876 0.76886 0.74528 0.87587 0.92374 0.74192 0.91892 0.91941 0.89565 0.89581 0.91796 0.91888 0.91105 0.91044 0.88442 0.88854 0.85638 0.85367 0.86783 0.75376 1.22811 1.21204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.68 9.81 127.77 1.25 0.57 16 2 N -0.42 1.99 3.09 -533.24 -1.65 0.34 16 3 C 0.08 -0.41 10.83 83.92 0.91 0.50 16 4 C -0.26 -0.99 6.29 -19.04 -0.12 -1.11 16 5 C 0.59 4.33 7.81 86.62 0.68 5.01 16 6 O -0.60 -10.89 16.57 -4.12 -0.07 -10.96 16 7 N -0.70 1.47 5.35 -443.46 -2.37 -0.90 16 8 C 0.12 -0.13 4.24 45.51 0.19 0.06 16 9 H 0.10 0.47 7.46 -2.39 -0.02 0.45 16 10 C -0.16 0.15 7.68 31.12 0.24 0.39 16 11 C 0.14 -0.24 4.24 45.52 0.19 -0.04 16 12 H 0.10 0.32 7.46 -2.39 -0.02 0.30 16 13 N -0.68 1.02 5.36 -567.59 -3.04 -2.02 16 14 C 0.64 3.85 8.06 129.79 1.05 4.90 16 15 O -0.60 -7.36 11.48 19.82 0.23 -7.13 16 16 O -0.37 -1.66 9.94 -55.48 -0.55 -2.21 16 17 C 0.13 0.34 1.13 -10.79 -0.01 0.32 16 18 C -0.18 -0.63 8.37 71.98 0.60 -0.02 16 19 C -0.18 -0.58 8.37 71.98 0.60 0.03 16 20 C -0.14 0.37 8.85 71.98 0.64 1.00 16 21 C -0.13 0.94 7.58 31.12 0.24 1.17 16 22 C -0.17 -1.03 9.49 23.62 0.22 -0.81 16 23 C -0.01 0.00 6.14 40.98 0.25 0.25 16 24 C -0.03 0.07 2.87 71.23 0.20 0.27 16 25 O -0.55 2.88 10.32 -148.98 -1.54 1.34 16 26 Si 0.78 -0.40 31.28 68.60 2.15 1.74 16 27 H 0.10 -1.37 8.14 -2.39 -0.02 -1.39 16 28 H 0.09 -0.77 6.73 -2.38 -0.02 -0.79 16 29 H 0.10 -1.53 8.13 -2.39 -0.02 -1.55 16 30 H 0.21 -3.18 7.45 -2.91 -0.02 -3.21 16 31 H 0.42 -4.35 7.67 -92.71 -0.71 -5.06 16 32 H 0.11 -0.43 8.14 -2.38 -0.02 -0.44 16 33 H 0.06 0.25 8.14 -2.38 -0.02 0.23 16 34 H 0.42 -3.15 8.84 -92.71 -0.82 -3.96 16 35 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 36 H 0.06 0.57 5.88 -2.39 -0.01 0.56 16 37 H 0.09 0.01 8.14 -2.38 -0.02 -0.01 16 38 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 39 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 40 H 0.06 0.55 5.88 -2.39 -0.01 0.54 16 41 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 42 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 43 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 44 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 45 H 0.13 -1.68 8.09 -2.39 -0.02 -1.70 16 46 H 0.13 1.26 6.66 -2.91 -0.02 1.24 16 47 H 0.11 -0.13 7.96 -2.39 -0.02 -0.15 16 48 H 0.40 -4.92 8.70 -74.06 -0.64 -5.57 16 49 H -0.30 -2.29 6.78 99.48 0.67 -1.61 16 50 H -0.29 -1.40 7.11 99.48 0.71 -0.69 16 Total: 0.00 -30.73 405.51 -0.89 -31.62 By element: Atomic # 1 Polarization: -23.13 SS G_CDS: -1.19 Total: -24.31 kcal Atomic # 6 Polarization: 5.36 SS G_CDS: 7.14 Total: 12.50 kcal Atomic # 7 Polarization: 4.48 SS G_CDS: -7.06 Total: -2.58 kcal Atomic # 8 Polarization: -17.04 SS G_CDS: -1.93 Total: -18.97 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: 2.15 Total: 1.74 kcal Total: -30.73 -0.89 -31.62 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_13287730.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.571 kcal (2) G-P(sol) polarization free energy of solvation -30.731 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.303 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.893 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.624 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.195 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds