Wall clock time and date at job start Sun Mar 7 2021 00:27:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38973 * 119.95851 * 2 1 4 4 O 1.35712 * 119.91012 * 0.02562 * 3 2 1 5 5 C 1.39015 * 120.17978 * 179.97438 * 3 2 1 6 6 C 1.50704 * 119.95881 * 179.97438 * 5 3 2 7 7 O 1.42890 * 109.47124 * 285.00387 * 6 5 3 8 8 Si 1.86296 * 109.46927 * 165.00000 * 6 5 3 9 9 C 1.37687 * 120.08554 * 359.79088 * 5 3 2 10 10 C 1.39755 * 119.91104 * 0.48464 * 9 5 3 11 11 C 1.47600 * 120.08758 * 179.76825 * 10 9 5 12 12 O 1.21583 * 120.00055 * 359.72527 * 11 10 9 13 13 N 1.34783 * 119.99721 * 179.72242 * 11 10 9 14 14 C 1.46499 * 119.99531 * 180.02562 * 13 11 10 15 15 H 1.08997 * 112.91343 * 23.75029 * 14 13 11 16 16 C 1.53781 * 113.61225 * 155.00207 * 14 13 11 17 17 C 1.53786 * 87.17350 * 139.93836 * 16 14 13 18 18 H 1.08993 * 113.61491 * 89.15923 * 17 16 14 19 19 N 1.46501 * 113.61366 * 220.06429 * 17 16 14 20 20 C 1.34773 * 120.00122 * 204.99908 * 19 17 16 21 21 O 1.21512 * 119.99857 * 359.97438 * 20 19 17 22 22 O 1.34633 * 120.00371 * 179.97438 * 20 19 17 23 23 C 1.45200 * 117.00039 * 179.97438 * 22 20 19 24 24 C 1.52999 * 109.47032 * 60.00357 * 23 22 20 25 25 C 1.53000 * 109.47001 * 180.02562 * 23 22 20 26 26 C 1.52993 * 109.47325 * 300.00054 * 23 22 20 27 27 C 1.53782 * 113.61191 * 252.49880 * 14 13 11 28 28 C 1.37719 * 119.95398 * 180.02562 * 2 1 3 29 29 H 1.09000 * 109.46943 * 269.98013 * 1 2 3 30 30 H 1.09011 * 109.46860 * 29.97667 * 1 2 3 31 31 H 1.08996 * 109.47487 * 149.97284 * 1 2 3 32 32 H 0.96696 * 114.00309 * 90.00181 * 4 3 2 33 33 H 1.09001 * 109.46533 * 45.00424 * 6 5 3 34 34 H 0.96698 * 114.00432 * 299.99314 * 7 6 5 35 35 H 1.48499 * 109.99847 * 180.02562 * 8 6 5 36 36 H 1.48504 * 110.00250 * 301.32351 * 8 6 5 37 37 H 1.08002 * 120.04231 * 180.23255 * 9 5 3 38 38 H 0.96997 * 119.99692 * 0.02562 * 13 11 10 39 39 H 1.09002 * 113.61445 * 254.52836 * 16 14 13 40 40 H 1.09002 * 113.61408 * 25.34566 * 16 14 13 41 41 H 0.97002 * 119.99797 * 24.99368 * 19 17 16 42 42 H 1.09004 * 109.47089 * 59.99992 * 24 23 22 43 43 H 1.08995 * 109.47372 * 179.97438 * 24 23 22 44 44 H 1.08996 * 109.47428 * 300.00203 * 24 23 22 45 45 H 1.09001 * 109.47473 * 60.00290 * 25 23 22 46 46 H 1.08995 * 109.47101 * 180.02562 * 25 23 22 47 47 H 1.09004 * 109.47386 * 300.00170 * 25 23 22 48 48 H 1.09002 * 109.46800 * 60.00475 * 26 23 22 49 49 H 1.09000 * 109.47248 * 179.97438 * 26 23 22 50 50 H 1.08992 * 109.47507 * 300.00423 * 26 23 22 51 51 H 1.08997 * 113.61668 * 334.56642 * 27 14 13 52 52 H 1.08998 * 113.61674 * 105.39151 * 27 14 13 53 53 H 1.07999 * 120.04545 * 359.97358 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2040 0.0000 4 8 1.5198 2.3778 0.0005 5 6 3.5911 1.2094 0.0005 6 6 4.3387 2.5180 0.0000 7 8 4.2726 3.1037 -1.3017 8 14 6.1197 2.2159 0.4554 9 6 4.2860 0.0207 0.0054 10 6 3.5918 -1.1922 -0.0004 11 6 4.3328 -2.4688 -0.0004 12 8 5.5486 -2.4660 -0.0003 13 7 3.6615 -3.6376 -0.0003 14 6 4.3969 -4.9046 0.0003 15 1 5.4046 -4.8102 0.4050 16 6 3.6014 -6.0783 0.5957 17 6 4.1896 -6.9477 -0.5282 18 1 5.1404 -7.4129 -0.2682 19 7 3.2295 -7.8943 -1.1013 20 6 3.6676 -9.0220 -1.6953 21 8 4.8590 -9.2534 -1.7558 22 8 2.7854 -9.8921 -2.2216 23 6 3.3286 -11.0851 -2.8461 24 6 4.1267 -11.8832 -1.8132 25 6 2.1835 -11.9463 -3.3828 26 6 4.2479 -10.6827 -4.0010 27 6 4.3402 -5.6504 -1.3434 28 6 2.1947 -1.1932 -0.0005 29 1 -0.3633 -0.0004 1.0277 30 1 -0.3633 0.8903 -0.5135 31 1 -0.3634 -0.8897 -0.5142 32 1 1.3227 2.7178 0.8840 33 1 3.8876 3.1943 0.7261 34 1 4.6566 2.5555 -1.9997 35 1 6.8676 3.4988 0.4590 36 1 6.2004 1.5776 1.7939 37 1 5.3660 0.0257 0.0096 38 1 2.6915 -3.6397 -0.0007 39 1 3.9332 -6.3697 1.5923 40 1 2.5208 -5.9515 0.5296 41 1 2.2785 -7.7094 -1.0533 42 1 3.4717 -12.1699 -0.9904 43 1 4.5341 -12.7789 -2.2818 44 1 4.9425 -11.2695 -1.4312 45 1 1.6152 -11.3776 -4.1188 46 1 2.5912 -12.8420 -3.8512 47 1 1.5281 -12.2330 -2.5603 48 1 5.0637 -10.0690 -3.6190 49 1 4.6560 -11.5783 -4.4695 50 1 3.6793 -10.1142 -4.7368 51 1 3.4616 -5.4074 -1.9409 52 1 5.2679 -5.5952 -1.9130 53 1 1.6547 -2.1285 -0.0005 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941094_13287732.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:27:16 Heat of formation + Delta-G solvation = -142.351600 kcal Electronic energy + Delta-G solvation = -34695.730332 eV Core-core repulsion = 29921.053588 eV Total energy + Delta-G solvation = -4774.676744 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -41.98248 -41.69026 -40.82361 -39.63722 -37.95837 -37.84223 -37.46009 -35.61678 -34.95304 -33.99419 -33.51652 -31.58755 -28.37249 -28.30243 -27.98465 -27.01787 -26.77849 -26.23557 -24.53126 -22.95409 -22.04903 -21.65104 -21.33215 -20.75663 -19.56793 -19.22429 -18.64856 -18.22927 -17.94156 -17.30357 -17.18400 -16.92333 -16.62405 -16.31334 -16.10900 -15.98687 -15.72221 -15.57235 -15.44136 -15.32253 -14.85020 -14.68325 -14.42445 -14.28952 -14.20466 -13.94269 -13.86394 -13.50321 -13.36714 -13.28200 -13.15165 -12.92984 -12.91049 -12.86718 -12.79917 -12.57988 -12.47909 -12.38024 -12.33001 -12.20824 -12.17491 -11.98116 -11.61145 -11.39658 -11.11158 -11.08004 -10.46943 -10.27628 -10.09662 -9.95215 -9.64101 -5.05455 -0.39281 0.08283 1.14220 1.20760 1.53237 1.62336 1.73847 1.84543 2.06487 2.57035 3.11611 3.16053 3.34206 3.38155 3.49502 3.58020 3.60611 3.74103 3.75563 3.78812 3.82676 3.88732 3.94311 4.03991 4.17345 4.33295 4.41289 4.47183 4.58104 4.60836 4.61697 4.63438 4.67107 4.72983 4.75321 4.76264 4.81556 4.84212 4.87654 4.87851 4.95941 5.01520 5.04991 5.09468 5.13764 5.21235 5.26799 5.27368 5.33438 5.36418 5.51466 5.59750 5.60962 6.39628 6.46500 6.68822 6.71271 7.12957 7.34819 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.122 4.122 3 C 0.153 3.847 4 O -0.497 6.497 5 C -0.160 4.160 6 C -0.052 4.052 7 O -0.549 6.549 8 Si 0.742 3.258 9 C -0.056 4.056 10 C -0.150 4.150 11 C 0.561 3.439 12 O -0.573 6.573 13 N -0.697 5.697 14 C 0.125 3.875 15 H 0.105 0.895 16 C -0.130 4.130 17 C 0.139 3.861 18 H 0.105 0.895 19 N -0.685 5.685 20 C 0.642 3.358 21 O -0.595 6.595 22 O -0.368 6.368 23 C 0.128 3.872 24 C -0.180 4.180 25 C -0.138 4.138 26 C -0.181 4.181 27 C -0.162 4.162 28 C -0.053 4.053 29 H 0.085 0.915 30 H 0.067 0.933 31 H 0.087 0.913 32 H 0.409 0.591 33 H 0.113 0.887 34 H 0.392 0.608 35 H -0.288 1.288 36 H -0.289 1.289 37 H 0.141 0.859 38 H 0.417 0.583 39 H 0.095 0.905 40 H 0.124 0.876 41 H 0.420 0.580 42 H 0.063 0.937 43 H 0.085 0.915 44 H 0.063 0.937 45 H 0.070 0.930 46 H 0.097 0.903 47 H 0.070 0.930 48 H 0.062 0.938 49 H 0.085 0.915 50 H 0.062 0.938 51 H 0.104 0.896 52 H 0.062 0.938 53 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.385 -3.536 0.955 9.150 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.122 4.122 3 C 0.107 3.893 4 O -0.310 6.310 5 C -0.161 4.161 6 C -0.163 4.163 7 O -0.356 6.356 8 Si 0.648 3.352 9 C -0.075 4.075 10 C -0.154 4.154 11 C 0.349 3.651 12 O -0.453 6.453 13 N -0.349 5.349 14 C 0.019 3.981 15 H 0.123 0.877 16 C -0.169 4.169 17 C 0.035 3.965 18 H 0.123 0.877 19 N -0.344 5.344 20 C 0.396 3.604 21 O -0.486 6.486 22 O -0.283 6.283 23 C 0.092 3.908 24 C -0.238 4.238 25 C -0.195 4.195 26 C -0.238 4.238 27 C -0.202 4.202 28 C -0.072 4.072 29 H 0.103 0.897 30 H 0.086 0.914 31 H 0.106 0.894 32 H 0.269 0.731 33 H 0.130 0.870 34 H 0.241 0.759 35 H -0.216 1.216 36 H -0.216 1.216 37 H 0.158 0.842 38 H 0.256 0.744 39 H 0.114 0.886 40 H 0.142 0.858 41 H 0.258 0.742 42 H 0.082 0.918 43 H 0.104 0.896 44 H 0.082 0.918 45 H 0.089 0.911 46 H 0.115 0.885 47 H 0.089 0.911 48 H 0.081 0.919 49 H 0.104 0.896 50 H 0.081 0.919 51 H 0.122 0.878 52 H 0.081 0.919 53 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -6.595 -3.162 1.183 7.408 hybrid contribution -0.766 0.476 0.655 1.115 sum -7.361 -2.686 1.838 8.048 Atomic orbital electron populations 1.20767 0.88309 1.04146 1.03624 1.20452 0.98321 0.91769 1.01685 1.18504 0.88785 0.85931 0.96058 1.84738 1.75529 1.35834 1.34921 1.20631 0.94279 0.95703 1.05506 1.24817 1.09062 0.93052 0.89353 1.86505 1.84832 1.47677 1.16589 0.93789 0.76238 0.80836 0.84351 1.21008 1.00013 0.90713 0.95756 1.19823 0.94353 0.92666 1.08508 1.18366 0.86827 0.84550 0.75348 1.90800 1.15139 1.88051 1.51349 1.45652 1.10873 1.04260 1.74092 1.22180 0.97566 0.81435 0.96934 0.87706 1.23718 1.02437 0.91925 0.98789 1.22286 0.93318 0.86416 0.94518 0.87655 1.44616 1.11662 1.18711 1.59429 1.18449 0.83512 0.81089 0.77372 1.90917 1.16791 1.77531 1.63371 1.86306 1.39457 1.32738 1.69771 1.22330 0.95226 0.81095 0.92183 1.22474 1.01000 1.01041 0.99235 1.21889 0.96657 0.99015 1.01900 1.22473 1.00261 1.03499 0.97538 1.24051 1.03581 0.94790 0.97746 1.21387 0.91652 0.99030 0.95084 0.89690 0.91434 0.89434 0.73056 0.87005 0.75864 1.21563 1.21558 0.84220 0.74376 0.88639 0.85828 0.74239 0.91821 0.89608 0.91802 0.91138 0.88457 0.91072 0.91861 0.89592 0.91928 0.87771 0.91941 0.81618 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.83 9.78 71.24 0.70 1.53 16 2 C -0.12 0.44 5.89 -19.81 -0.12 0.32 16 3 C 0.15 -0.01 6.66 22.63 0.15 0.14 16 4 O -0.50 0.26 11.84 -90.33 -1.07 -0.81 16 5 C -0.16 -0.17 5.27 -19.81 -0.10 -0.27 16 6 C -0.05 -0.07 2.37 71.24 0.17 0.10 16 7 O -0.55 -1.70 12.88 -148.98 -1.92 -3.62 16 8 Si 0.74 1.41 29.91 68.60 2.05 3.46 16 9 C -0.06 -0.10 8.20 22.51 0.18 0.09 16 10 C -0.15 0.04 5.88 -20.08 -0.12 -0.08 16 11 C 0.56 1.15 7.76 86.71 0.67 1.82 16 12 O -0.57 -6.07 15.94 -3.98 -0.06 -6.13 16 13 N -0.70 3.82 5.30 -443.13 -2.35 1.47 16 14 C 0.12 -0.55 4.24 45.52 0.19 -0.36 16 15 H 0.10 0.03 7.47 -2.39 -0.02 0.01 16 16 C -0.13 1.24 7.58 31.12 0.24 1.48 16 17 C 0.14 -0.51 4.25 45.58 0.19 -0.32 16 18 H 0.11 0.09 7.47 -2.39 -0.02 0.07 16 19 N -0.68 1.88 5.36 -567.32 -3.04 -1.17 16 20 C 0.64 3.17 8.06 129.79 1.05 4.22 16 21 O -0.60 -6.60 11.48 19.80 0.23 -6.37 16 22 O -0.37 -1.41 9.94 -55.43 -0.55 -1.96 16 23 C 0.13 0.26 1.13 -10.80 -0.01 0.25 16 24 C -0.18 -0.45 8.37 71.98 0.60 0.15 16 25 C -0.14 0.42 8.85 71.98 0.64 1.05 16 26 C -0.18 -0.51 8.37 71.98 0.60 0.09 16 27 C -0.16 0.57 7.68 31.18 0.24 0.81 16 28 C -0.05 0.30 9.18 22.50 0.21 0.50 16 29 H 0.08 -0.81 8.14 -2.39 -0.02 -0.83 16 30 H 0.07 -0.31 7.52 -2.38 -0.02 -0.33 16 31 H 0.09 -0.91 8.08 -2.39 -0.02 -0.93 16 32 H 0.41 -3.66 9.06 -74.06 -0.67 -4.33 16 33 H 0.11 0.09 7.82 -2.39 -0.02 0.08 16 34 H 0.39 -1.62 8.70 -74.06 -0.64 -2.26 16 35 H -0.29 -2.36 7.11 99.48 0.71 -1.65 16 36 H -0.29 -2.15 7.11 99.48 0.71 -1.45 16 37 H 0.14 0.27 4.69 -2.91 -0.01 0.26 16 38 H 0.42 -5.23 6.75 -92.71 -0.63 -5.86 16 39 H 0.10 -0.92 8.14 -2.39 -0.02 -0.94 16 40 H 0.12 -1.85 8.09 -2.39 -0.02 -1.87 16 41 H 0.42 -3.54 8.84 -92.71 -0.82 -4.36 16 42 H 0.06 0.10 8.14 -2.38 -0.02 0.08 16 43 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 44 H 0.06 0.51 5.88 -2.39 -0.01 0.49 16 45 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 46 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 47 H 0.07 -0.25 8.14 -2.38 -0.02 -0.26 16 48 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 49 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 50 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 51 H 0.10 -0.62 8.14 -2.39 -0.02 -0.64 16 52 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 53 H 0.17 -2.22 6.39 -2.91 -0.02 -2.23 16 Total: 0.00 -27.90 428.60 -2.97 -30.87 By element: Atomic # 1 Polarization: -25.54 SS G_CDS: -1.73 Total: -27.27 kcal Atomic # 6 Polarization: 6.04 SS G_CDS: 5.48 Total: 11.52 kcal Atomic # 7 Polarization: 5.70 SS G_CDS: -5.39 Total: 0.30 kcal Atomic # 8 Polarization: -15.51 SS G_CDS: -3.38 Total: -18.89 kcal Atomic # 14 Polarization: 1.41 SS G_CDS: 2.05 Total: 3.46 kcal Total: -27.90 -2.97 -30.87 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_13287732.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.481 kcal (2) G-P(sol) polarization free energy of solvation -27.903 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.384 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.967 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.871 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.352 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds