Wall clock time and date at job start Sun Mar 7 2021 00:27:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36416 * 125.80337 * 2 1 4 4 C 1.47374 * 127.19001 * 0.05815 * 3 2 1 5 5 O 1.21615 * 120.00106 * 359.97438 * 4 3 2 6 6 N 1.34775 * 120.00099 * 179.97438 * 4 3 2 7 7 C 1.46502 * 120.00219 * 179.97438 * 6 4 3 8 8 H 1.08992 * 112.84851 * 45.99703 * 7 6 4 9 9 C 1.53785 * 113.61484 * 177.30629 * 7 6 4 10 10 C 1.53781 * 87.08083 * 89.11373 * 9 7 6 11 11 H 1.09006 * 113.61366 * 139.98021 * 10 9 7 12 12 N 1.46501 * 113.69398 * 270.87126 * 10 9 7 13 13 C 1.34773 * 120.00099 * 255.67181 * 12 10 9 14 14 O 1.21512 * 119.99910 * 359.97438 * 13 12 10 15 15 O 1.34638 * 120.00131 * 179.97438 * 13 12 10 16 16 C 1.45199 * 117.00119 * 179.97438 * 15 13 12 17 17 C 1.53003 * 109.47043 * 60.00163 * 16 15 13 18 18 C 1.52999 * 109.47222 * 180.02562 * 16 15 13 19 19 C 1.53003 * 109.47261 * 300.00130 * 16 15 13 20 20 C 1.53784 * 87.08352 * 25.43239 * 10 9 7 21 21 C 1.47018 * 105.61666 * 180.02562 * 3 2 1 22 22 C 1.34178 * 105.95480 * 0.02562 * 21 3 2 23 23 C 1.50699 * 125.43906 * 180.02562 * 22 21 3 24 24 O 1.42900 * 109.47561 * 64.98737 * 23 22 21 25 25 Si 1.86296 * 109.47385 * 184.99267 * 23 22 21 26 26 O 1.33660 * 125.80185 * 180.33372 * 2 1 3 27 27 H 1.08999 * 109.47049 * 89.99870 * 1 2 3 28 28 H 1.09009 * 109.47229 * 209.99984 * 1 2 3 29 29 H 1.09002 * 109.47135 * 329.99709 * 1 2 3 30 30 H 0.97002 * 119.99682 * 0.02562 * 6 4 3 31 31 H 1.09002 * 113.61133 * 203.66544 * 9 7 6 32 32 H 1.08994 * 113.61246 * 334.56404 * 9 7 6 33 33 H 0.96996 * 119.99627 * 75.66974 * 12 10 9 34 34 H 1.09004 * 109.46705 * 59.99527 * 17 16 15 35 35 H 1.08998 * 109.47063 * 179.97438 * 17 16 15 36 36 H 1.09002 * 109.46973 * 299.99942 * 17 16 15 37 37 H 1.09004 * 109.47014 * 59.99787 * 18 16 15 38 38 H 1.08998 * 109.47402 * 180.02562 * 18 16 15 39 39 H 1.09006 * 109.46906 * 300.00133 * 18 16 15 40 40 H 1.09001 * 109.46638 * 59.99713 * 19 16 15 41 41 H 1.08998 * 109.47060 * 180.02562 * 19 16 15 42 42 H 1.08996 * 109.47034 * 299.99908 * 19 16 15 43 43 H 1.08992 * 113.61335 * 220.01621 * 20 10 9 44 44 H 1.09005 * 113.61285 * 89.11213 * 20 10 9 45 45 H 1.08001 * 127.02178 * 179.97438 * 21 3 2 46 46 H 1.09009 * 109.47059 * 304.99360 * 23 22 21 47 47 H 0.96694 * 114.00642 * 179.97438 * 24 23 22 48 48 H 1.48501 * 110.00100 * 300.00099 * 25 23 22 49 49 H 1.48499 * 109.99778 * 61.31571 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5157 0.0012 5 8 0.6890 2.7891 0.0019 6 7 2.7930 3.5015 0.0015 7 6 2.3646 4.9024 0.0022 8 1 1.5736 5.1028 0.7248 9 6 3.5304 5.9032 0.0687 10 6 3.5554 5.8559 -1.4682 11 1 3.7263 6.8274 -1.9322 12 7 4.4211 4.8061 -2.0109 13 6 5.6200 5.1262 -2.5368 14 8 5.9826 6.2857 -2.5613 15 8 6.4158 4.1613 -3.0351 16 6 7.6926 4.5791 -3.5862 17 6 8.5163 5.2700 -2.4976 18 6 8.4515 3.3542 -4.1006 19 6 7.4550 5.5536 -4.7416 20 6 2.0715 5.4576 -1.4018 21 6 3.6849 0.5990 -0.0006 22 6 3.5859 -0.7391 -0.0015 23 6 4.7459 -1.7011 -0.0019 24 8 5.4759 -1.5676 1.2193 25 14 4.1070 -3.4443 -0.1560 26 8 2.2889 -1.0840 -0.0063 27 1 -0.3633 0.0000 -1.0277 28 1 -0.3634 -0.8901 0.5139 29 1 -0.3633 0.8900 0.5139 30 1 3.7382 3.2833 0.0006 31 1 3.2482 6.8761 0.4712 32 1 4.4289 5.4965 0.5327 33 1 4.1315 3.8806 -1.9916 34 1 8.6855 4.5757 -1.6744 35 1 9.4749 5.5832 -2.9111 36 1 7.9755 6.1427 -2.1315 37 1 7.8644 2.8624 -4.8762 38 1 9.4101 3.6678 -4.5138 39 1 8.6207 2.6597 -3.2776 40 1 6.9142 6.4262 -4.3755 41 1 8.4135 5.8668 -5.1556 42 1 6.8682 5.0614 -5.5171 43 1 1.7924 4.6913 -2.1248 44 1 1.3905 6.3087 -1.4013 45 1 4.5928 1.1840 -0.0012 46 1 5.4020 -1.4788 -0.8435 47 1 6.2383 -2.1584 1.2885 48 1 3.2111 -3.7597 0.9855 49 1 3.3730 -3.6048 -1.4369 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_13308374.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:27:28 Heat of formation + Delta-G solvation = -98.347705 kcal Electronic energy + Delta-G solvation = -32819.984418 eV Core-core repulsion = 28330.979586 eV Total energy + Delta-G solvation = -4489.004832 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.176 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -43.79358 -42.03795 -41.12556 -39.47513 -38.04012 -37.78662 -35.33334 -34.78011 -34.17351 -33.46038 -33.05897 -29.55081 -28.35859 -28.31417 -26.99702 -26.60189 -25.50365 -24.31525 -23.26150 -22.11669 -21.37856 -20.74107 -20.34567 -19.23959 -18.83997 -18.41181 -17.61611 -17.33739 -17.21998 -17.05352 -17.01182 -16.44990 -16.36380 -15.87755 -15.72718 -15.49551 -15.38312 -15.16829 -14.78886 -14.44708 -14.25595 -14.15497 -14.13697 -13.93498 -13.88059 -13.49859 -13.43937 -13.15783 -13.13709 -13.02712 -12.87629 -12.85716 -12.60716 -12.50024 -12.27161 -12.12896 -12.08878 -11.56195 -11.32996 -11.02870 -10.99791 -10.91859 -10.58478 -10.32097 -10.10047 -9.59445 -5.16653 0.24650 0.77600 1.06336 1.10565 1.44960 1.60237 1.82406 1.95803 2.03925 2.28704 3.06146 3.13994 3.22602 3.40934 3.47488 3.61519 3.68029 3.74755 3.76147 3.80355 3.94201 3.98534 4.05624 4.13155 4.35876 4.47777 4.50013 4.52322 4.54110 4.55961 4.58497 4.60269 4.68890 4.73516 4.75369 4.77583 4.83324 4.85034 4.89725 4.90439 5.04856 5.06278 5.17096 5.20901 5.34063 5.40171 5.51254 5.57382 5.88569 6.34144 6.37284 6.40155 7.15884 7.37774 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.097 3.903 3 C -0.254 4.254 4 C 0.597 3.403 5 O -0.531 6.531 6 N -0.712 5.712 7 C 0.122 3.878 8 H 0.101 0.899 9 C -0.155 4.155 10 C 0.135 3.865 11 H 0.111 0.889 12 N -0.697 5.697 13 C 0.652 3.348 14 O -0.562 6.562 15 O -0.365 6.365 16 C 0.137 3.863 17 C -0.184 4.184 18 C -0.142 4.142 19 C -0.185 4.185 20 C -0.153 4.153 21 C -0.144 4.144 22 C -0.012 4.012 23 C -0.035 4.035 24 O -0.543 6.543 25 Si 0.708 3.292 26 O -0.175 6.175 27 H 0.093 0.907 28 H 0.080 0.920 29 H 0.113 0.887 30 H 0.400 0.600 31 H 0.114 0.886 32 H 0.080 0.920 33 H 0.404 0.596 34 H 0.060 0.940 35 H 0.072 0.928 36 H 0.087 0.913 37 H 0.067 0.933 38 H 0.082 0.918 39 H 0.067 0.933 40 H 0.087 0.913 41 H 0.072 0.928 42 H 0.060 0.940 43 H 0.080 0.920 44 H 0.112 0.888 45 H 0.159 0.841 46 H 0.096 0.904 47 H 0.391 0.609 48 H -0.249 1.249 49 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.344 -3.494 -0.848 5.639 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.044 3.956 3 C -0.259 4.259 4 C 0.386 3.614 5 O -0.409 6.409 6 N -0.365 5.365 7 C 0.017 3.983 8 H 0.119 0.881 9 C -0.194 4.194 10 C 0.031 3.969 11 H 0.129 0.871 12 N -0.357 5.357 13 C 0.406 3.594 14 O -0.450 6.450 15 O -0.280 6.280 16 C 0.101 3.899 17 C -0.241 4.241 18 C -0.199 4.199 19 C -0.242 4.242 20 C -0.192 4.192 21 C -0.163 4.163 22 C -0.059 4.059 23 C -0.145 4.145 24 O -0.351 6.351 25 Si 0.607 3.393 26 O -0.073 6.073 27 H 0.111 0.889 28 H 0.099 0.901 29 H 0.132 0.868 30 H 0.236 0.764 31 H 0.132 0.868 32 H 0.098 0.902 33 H 0.239 0.761 34 H 0.079 0.921 35 H 0.091 0.909 36 H 0.106 0.894 37 H 0.086 0.914 38 H 0.101 0.899 39 H 0.086 0.914 40 H 0.106 0.894 41 H 0.091 0.909 42 H 0.079 0.921 43 H 0.099 0.901 44 H 0.130 0.870 45 H 0.177 0.823 46 H 0.114 0.886 47 H 0.240 0.760 48 H -0.173 1.173 49 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 2.516 -3.086 -0.874 4.076 hybrid contribution 0.574 0.217 -0.064 0.617 sum 3.090 -2.869 -0.938 4.319 Atomic orbital electron populations 1.20724 0.83229 1.05529 1.04814 1.22951 0.94081 0.82762 0.95812 1.21082 0.93178 0.93713 1.17891 1.17111 0.85369 0.83481 0.75462 1.90789 1.16363 1.83904 1.49864 1.45615 1.09644 1.05199 1.76037 1.21939 0.98119 0.80074 0.98198 0.88117 1.23798 0.98502 1.00390 0.96672 1.21918 0.89405 0.91646 0.93977 0.87073 1.44513 1.16103 1.11498 1.63539 1.18081 0.81125 0.83407 0.76837 1.90925 1.73965 1.18955 1.61169 1.86303 1.30726 1.38438 1.72531 1.22126 0.78826 0.95645 0.93326 1.22527 1.00682 1.02508 0.98431 1.21883 0.99766 0.96350 1.01911 1.22530 1.03504 1.00805 0.97372 1.23780 0.95187 1.02526 0.97741 1.22533 0.96403 0.93284 1.04072 1.21046 0.82083 0.94176 1.08609 1.23798 0.91731 1.08342 0.90638 1.86461 1.45996 1.66234 1.36384 0.95248 0.85211 0.77452 0.81377 1.83703 1.16501 1.35361 1.71687 0.88872 0.90068 0.86848 0.76419 0.86821 0.90160 0.76055 0.92113 0.90886 0.89393 0.91399 0.89884 0.91389 0.89406 0.90876 0.92117 0.90119 0.86953 0.82334 0.88648 0.75992 1.17290 1.17656 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.08 9.89 36.01 0.36 0.28 16 2 C 0.10 0.29 7.37 -34.97 -0.26 0.03 16 3 C -0.25 -0.68 6.31 -103.28 -0.65 -1.33 16 4 C 0.60 1.59 7.81 -12.54 -0.10 1.49 16 5 O -0.53 -2.75 14.78 5.26 0.08 -2.67 16 6 N -0.71 0.09 4.34 -54.10 -0.23 -0.15 16 7 C 0.12 -0.10 4.00 -67.11 -0.27 -0.36 16 8 H 0.10 0.00 8.04 -51.93 -0.42 -0.42 16 9 C -0.15 0.29 7.58 -25.92 -0.20 0.09 16 10 C 0.14 -0.10 4.28 -67.12 -0.29 -0.39 16 11 H 0.11 0.02 7.54 -51.93 -0.39 -0.37 16 12 N -0.70 -0.06 4.97 -57.93 -0.29 -0.35 16 13 C 0.65 1.64 8.06 54.05 0.44 2.07 16 14 O -0.56 -2.64 11.52 -19.28 -0.22 -2.86 16 15 O -0.37 -0.73 9.94 -40.32 -0.40 -1.13 16 16 C 0.14 0.13 1.13 -90.62 -0.10 0.02 16 17 C -0.18 -0.16 8.37 37.16 0.31 0.15 16 18 C -0.14 0.17 8.85 37.16 0.33 0.49 16 19 C -0.18 -0.22 8.37 37.16 0.31 0.10 16 20 C -0.15 0.18 7.62 -25.91 -0.20 -0.02 16 21 C -0.14 -0.21 10.48 -37.46 -0.39 -0.60 16 22 C -0.01 -0.03 6.22 -35.74 -0.22 -0.25 16 23 C -0.04 0.04 2.96 36.01 0.11 0.14 16 24 O -0.54 0.59 12.86 -35.23 -0.45 0.14 16 25 Si 0.71 -0.99 32.09 -169.99 -5.46 -6.44 16 26 O -0.17 -0.63 8.90 7.64 0.07 -0.56 16 27 H 0.09 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.08 -0.03 8.14 -51.92 -0.42 -0.45 16 29 H 0.11 0.20 6.48 -51.93 -0.34 -0.14 16 30 H 0.40 -0.60 7.00 -40.82 -0.29 -0.89 16 31 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 32 H 0.08 -0.11 8.13 -51.93 -0.42 -0.53 16 33 H 0.40 -0.34 7.31 -40.82 -0.30 -0.64 16 34 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 35 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 36 H 0.09 0.26 5.88 -51.93 -0.31 -0.04 16 37 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 41 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 42 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 43 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 44 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 45 H 0.16 -0.15 7.74 -52.49 -0.41 -0.55 16 46 H 0.10 -0.34 7.96 -51.92 -0.41 -0.75 16 47 H 0.39 -2.53 8.74 45.56 0.40 -2.13 16 48 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 49 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 LS Contribution 401.32 15.07 6.05 6.05 Total: 0.00 -9.67 401.32 -9.14 -18.81 By element: Atomic # 1 Polarization: -5.31 SS G_CDS: -7.45 Total: -12.77 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: -0.82 Total: 1.94 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.52 Total: -0.50 kcal Atomic # 8 Polarization: -6.16 SS G_CDS: -0.93 Total: -7.09 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.46 Total: -6.44 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -9.67 -9.14 -18.81 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_13308374.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.534 kcal (2) G-P(sol) polarization free energy of solvation -9.675 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.208 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.348 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds