Wall clock time and date at job start Sun Mar 7 2021 00:27:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52999 * 109.47269 * 2 1 4 4 C 1.52997 * 109.47232 * 239.99603 * 2 1 3 5 5 O 1.45206 * 109.46989 * 119.99587 * 2 1 3 6 6 C 1.34639 * 116.99892 * 59.99951 * 5 2 1 7 7 O 1.21513 * 119.99857 * 359.97438 * 6 5 2 8 8 N 1.34773 * 119.99616 * 179.97438 * 6 5 2 9 9 C 1.46507 * 119.99575 * 179.97438 * 8 6 5 10 10 H 1.08999 * 112.84738 * 334.66876 * 9 8 6 11 11 C 1.53776 * 113.61084 * 105.86584 * 9 8 6 12 12 C 1.54049 * 86.98750 * 89.16229 * 11 9 8 13 13 H 1.08999 * 113.62537 * 139.97653 * 12 11 9 14 14 N 1.46504 * 113.68657 * 270.87220 * 12 11 9 15 15 C 1.34776 * 119.99983 * 252.52171 * 14 12 11 16 16 O 1.21593 * 119.99840 * 0.02562 * 15 14 12 17 17 C 1.47528 * 120.00092 * 179.97438 * 15 14 12 18 18 C 1.40141 * 120.19110 * 179.72852 * 17 15 14 19 19 O 1.35649 * 120.15020 * 0.02562 * 18 17 15 20 20 C 1.38716 * 119.69692 * 179.77658 * 18 17 15 21 21 C 1.38048 * 120.08304 * 0.50103 * 20 18 17 22 22 C 1.50707 * 119.80130 * 179.72406 * 21 20 18 23 23 O 1.42893 * 109.47102 * 300.02306 * 22 21 20 24 24 Si 1.86304 * 109.46818 * 180.02562 * 22 21 20 25 25 C 1.38547 * 120.39300 * 359.74899 * 21 20 18 26 26 C 1.37786 * 120.30317 * 0.02562 * 25 21 20 27 27 C 1.53781 * 87.07893 * 25.42790 * 12 11 9 28 28 H 1.09000 * 109.47140 * 300.00547 * 1 2 3 29 29 H 1.09001 * 109.47230 * 59.99691 * 1 2 3 30 30 H 1.09001 * 109.47375 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47362 * 180.02562 * 3 2 1 32 32 H 1.09002 * 109.46716 * 299.99747 * 3 2 1 33 33 H 1.09000 * 109.47486 * 59.99665 * 3 2 1 34 34 H 1.09001 * 109.46832 * 300.00199 * 4 2 1 35 35 H 1.09002 * 109.47153 * 60.00008 * 4 2 1 36 36 H 1.08996 * 109.46952 * 180.02562 * 4 2 1 37 37 H 0.96996 * 120.00663 * 0.02562 * 8 6 5 38 38 H 1.09007 * 113.61050 * 203.66272 * 11 9 8 39 39 H 1.08997 * 113.62144 * 334.56619 * 11 9 8 40 40 H 0.96998 * 119.99719 * 72.53234 * 14 12 11 41 41 H 0.96700 * 114.00414 * 90.00259 * 19 18 17 42 42 H 1.08000 * 119.95362 * 180.23528 * 20 18 17 43 43 H 1.09000 * 109.47087 * 60.02774 * 22 21 20 44 44 H 0.96703 * 114.00606 * 300.00097 * 23 22 21 45 45 H 1.48496 * 110.00197 * 58.67952 * 24 22 21 46 46 H 1.48505 * 109.99917 * 180.02562 * 24 22 21 47 47 H 1.08008 * 119.84949 * 180.02562 * 25 21 20 48 48 H 1.07996 * 120.05112 * 180.02562 * 26 25 21 49 49 H 1.08997 * 113.61652 * 220.02859 * 27 12 11 50 50 H 1.09005 * 113.61557 * 89.11751 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1857 6 6 1.6521 -1.9723 1.3385 7 8 0.9508 -2.5094 0.5042 8 7 2.0680 -2.6655 2.4169 9 6 1.6738 -4.0667 2.5835 10 1 0.7448 -4.3092 2.0675 11 6 2.8112 -5.0637 2.3057 12 6 3.1789 -4.9345 3.7961 13 1 3.4655 -5.8788 4.2588 14 7 4.1262 -3.8528 4.0770 15 6 5.4027 -4.1416 4.3987 16 8 5.7682 -5.2999 4.4554 17 6 6.3568 -3.0523 4.6810 18 6 7.6837 -3.3483 5.0214 19 8 8.0973 -4.6382 5.0926 20 6 8.5733 -2.3159 5.2803 21 6 8.1495 -1.0039 5.2125 22 6 9.1199 0.1126 5.5010 23 8 9.6202 -0.0234 6.8326 24 14 8.2503 1.7511 5.3287 25 6 6.8373 -0.7073 4.8813 26 6 5.9412 -1.7200 4.6166 27 6 1.7112 -4.5477 4.0437 28 1 -0.3633 0.5139 0.8899 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 3.1300 1.4425 -0.0005 32 1 1.6767 1.9562 -0.8900 33 1 1.6767 1.9564 0.8899 34 1 1.6766 -1.7490 -1.2491 35 1 1.6767 -0.2075 -2.1392 36 1 3.1300 -0.7217 -1.2489 37 1 2.6275 -2.2367 3.0830 38 1 2.4619 -6.0579 2.0269 39 1 3.5752 -4.6777 1.6310 40 1 3.8346 -2.9288 4.0315 41 1 8.4420 -4.9873 4.2593 42 1 9.5978 -2.5392 5.5393 43 1 9.9488 0.0651 4.7947 44 1 8.9360 0.0097 7.5152 45 1 7.0986 1.8158 6.2639 46 1 9.1967 2.8605 5.6100 47 1 6.5152 0.3224 4.8304 48 1 4.9194 -1.4842 4.3585 49 1 1.5879 -3.7452 4.7710 50 1 1.0617 -5.4010 4.2390 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_13422076.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:27:36 Heat of formation + Delta-G solvation = -120.970305 kcal Electronic energy + Delta-G solvation = -34105.488303 eV Core-core repulsion = 29487.276340 eV Total energy + Delta-G solvation = -4618.211962 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.176 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.20659 -41.62815 -40.79885 -39.40613 -38.45251 -37.79262 -37.27568 -35.36571 -34.73897 -33.82540 -32.49207 -31.18452 -28.37632 -28.33330 -27.81336 -26.97029 -25.98911 -24.09109 -23.97804 -23.00580 -21.83649 -21.32396 -20.77102 -19.45353 -19.28090 -18.73240 -18.33987 -17.62362 -17.40941 -17.16973 -16.82080 -16.58793 -16.50445 -16.29099 -15.99784 -15.95536 -15.72795 -15.48409 -15.26917 -15.16885 -14.98005 -14.52750 -14.35768 -13.98530 -13.79291 -13.78316 -13.46727 -13.34219 -13.15835 -13.09586 -12.96268 -12.90724 -12.87861 -12.49815 -12.45342 -12.29673 -12.15263 -12.00257 -11.71024 -11.62856 -11.35610 -11.04043 -10.94957 -10.72489 -10.34389 -10.24615 -10.11528 -9.86661 -5.08908 -0.48637 0.03415 1.01357 1.11795 1.47231 1.67563 1.77958 1.85107 1.89095 2.48681 2.96233 3.04646 3.19436 3.21923 3.33280 3.37696 3.52059 3.62652 3.71487 3.72571 3.78498 3.90555 3.91315 3.92126 4.12560 4.31513 4.40259 4.42853 4.49660 4.52153 4.52739 4.58813 4.61286 4.62367 4.70936 4.73893 4.78380 4.85487 4.87822 4.88544 4.88751 5.03932 5.04629 5.12845 5.15841 5.32288 5.37163 5.44952 5.46869 5.50801 6.24114 6.25351 6.28124 6.65397 7.10207 7.31595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C 0.138 3.862 3 C -0.142 4.142 4 C -0.185 4.185 5 O -0.365 6.365 6 C 0.653 3.347 7 O -0.559 6.559 8 N -0.696 5.696 9 C 0.133 3.867 10 H 0.114 0.886 11 C -0.163 4.163 12 C 0.117 3.883 13 H 0.112 0.888 14 N -0.713 5.713 15 C 0.563 3.437 16 O -0.511 6.511 17 C -0.166 4.166 18 C 0.175 3.825 19 O -0.476 6.476 20 C -0.128 4.128 21 C -0.073 4.073 22 C -0.081 4.081 23 O -0.526 6.526 24 Si 0.687 3.313 25 C -0.134 4.134 26 C -0.065 4.065 27 C -0.152 4.152 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.068 0.932 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.396 0.604 38 H 0.108 0.892 39 H 0.078 0.922 40 H 0.391 0.609 41 H 0.399 0.601 42 H 0.141 0.859 43 H 0.124 0.876 44 H 0.378 0.622 45 H -0.258 1.258 46 H -0.254 1.254 47 H 0.137 0.863 48 H 0.130 0.870 49 H 0.082 0.918 50 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.872 4.370 -2.009 5.161 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.101 3.899 3 C -0.199 4.199 4 C -0.242 4.242 5 O -0.280 6.280 6 C 0.407 3.593 7 O -0.447 6.447 8 N -0.356 5.356 9 C 0.029 3.971 10 H 0.132 0.868 11 C -0.203 4.203 12 C 0.012 3.988 13 H 0.130 0.870 14 N -0.367 5.367 15 C 0.351 3.649 16 O -0.386 6.386 17 C -0.169 4.169 18 C 0.128 3.872 19 O -0.287 6.287 20 C -0.147 4.147 21 C -0.074 4.074 22 C -0.190 4.190 23 O -0.332 6.332 24 Si 0.588 3.412 25 C -0.151 4.151 26 C -0.084 4.084 27 C -0.190 4.190 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.087 0.913 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.232 0.768 38 H 0.126 0.874 39 H 0.097 0.903 40 H 0.228 0.772 41 H 0.257 0.743 42 H 0.159 0.841 43 H 0.141 0.859 44 H 0.226 0.774 45 H -0.182 1.182 46 H -0.179 1.179 47 H 0.154 0.846 48 H 0.148 0.852 49 H 0.101 0.899 50 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -1.814 4.061 -1.785 4.792 hybrid contribution 0.196 0.158 0.853 0.890 sum -1.618 4.218 -0.932 4.613 Atomic orbital electron populations 1.22532 0.93820 1.05081 1.02790 1.22134 0.94454 0.91551 0.81729 1.21886 1.02395 0.92248 1.03401 1.22529 1.01654 1.03462 0.96568 1.86291 1.71496 1.23276 1.46912 1.18048 0.78633 0.80613 0.82015 1.90935 1.40590 1.70472 1.42729 1.44490 1.55506 1.11855 1.23777 1.21966 0.99419 0.78350 0.97382 0.86847 1.24011 0.98726 1.00652 0.96936 1.22044 0.88264 0.92013 0.96482 0.86959 1.45709 1.10091 1.09259 1.71669 1.18034 0.81642 0.88616 0.76619 1.90848 1.77325 1.20295 1.50127 1.20391 0.95177 0.93705 1.07676 1.18498 0.90035 0.84828 0.93836 1.84764 1.83397 1.22623 1.37942 1.21365 1.00720 0.91164 1.01440 1.20408 0.94500 0.95092 0.97397 1.25157 1.02098 1.04932 0.86842 1.86629 1.37282 1.94707 1.14620 0.95005 0.79300 0.75350 0.91557 1.20943 0.92838 0.99420 1.01942 1.21089 0.99504 0.90953 0.96843 1.23767 0.96324 1.02999 0.95950 0.92083 0.90863 0.89425 0.91282 0.89896 0.91356 0.89438 0.90862 0.92057 0.76846 0.87377 0.90285 0.77224 0.74265 0.84070 0.85855 0.77419 1.18233 1.17928 0.84566 0.85234 0.89912 0.86362 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -0.06 8.37 37.16 0.31 0.25 16 2 C 0.14 0.01 1.13 -90.62 -0.10 -0.09 16 3 C -0.14 0.29 8.85 37.16 0.33 0.62 16 4 C -0.18 -0.07 8.37 37.16 0.31 0.24 16 5 O -0.36 -0.28 9.94 -40.32 -0.40 -0.68 16 6 C 0.65 0.94 8.06 54.05 0.44 1.38 16 7 O -0.56 -2.22 11.50 -19.28 -0.22 -2.44 16 8 N -0.70 0.99 5.13 -57.93 -0.30 0.69 16 9 C 0.13 -0.25 4.30 -67.11 -0.29 -0.53 16 10 H 0.11 -0.09 7.50 -51.93 -0.39 -0.48 16 11 C -0.16 0.25 7.70 -25.78 -0.20 0.05 16 12 C 0.12 -0.18 4.33 -66.97 -0.29 -0.47 16 13 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 14 N -0.71 0.95 5.09 -53.92 -0.27 0.68 16 15 C 0.56 0.98 7.76 -12.47 -0.10 0.88 16 16 O -0.51 -2.72 14.76 -16.59 -0.24 -2.96 16 17 C -0.17 -0.08 5.89 -104.85 -0.62 -0.70 16 18 C 0.17 0.23 6.72 -38.69 -0.26 -0.03 16 19 O -0.48 -1.10 11.58 -40.53 -0.47 -1.57 16 20 C -0.13 -0.01 9.53 -39.47 -0.38 -0.39 16 21 C -0.07 0.09 5.39 -104.57 -0.56 -0.47 16 22 C -0.08 0.13 2.81 36.01 0.10 0.23 16 23 O -0.53 -0.10 12.76 -35.23 -0.45 -0.55 16 24 Si 0.69 -1.69 29.77 -169.99 -5.06 -6.75 16 25 C -0.13 0.32 8.64 -39.63 -0.34 -0.03 16 26 C -0.07 0.14 9.54 -39.20 -0.37 -0.24 16 27 C -0.15 0.52 7.58 -25.92 -0.20 0.33 16 28 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 30 H 0.09 0.22 5.88 -51.93 -0.31 -0.09 16 31 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 33 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 34 H 0.09 0.23 5.88 -51.93 -0.31 -0.08 16 35 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 37 H 0.40 -1.37 6.28 -40.82 -0.26 -1.63 16 38 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 39 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 40 H 0.39 -1.40 4.19 -40.82 -0.17 -1.57 16 41 H 0.40 -0.55 9.06 45.56 0.41 -0.14 16 42 H 0.14 -0.01 8.06 -52.49 -0.42 -0.44 16 43 H 0.12 -0.30 7.96 -51.93 -0.41 -0.72 16 44 H 0.38 -0.96 8.70 45.56 0.40 -0.57 16 45 H -0.26 0.17 7.11 56.52 0.40 0.57 16 46 H -0.25 -0.29 7.11 56.52 0.40 0.12 16 47 H 0.14 -0.60 4.85 -52.48 -0.25 -0.86 16 48 H 0.13 -0.65 6.40 -52.49 -0.34 -0.99 16 49 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 50 H 0.12 -0.55 8.14 -51.93 -0.42 -0.97 16 LS Contribution 401.48 15.07 6.05 6.05 Total: 0.00 -10.34 401.48 -9.87 -20.20 By element: Atomic # 1 Polarization: -7.42 SS G_CDS: -6.28 Total: -13.70 kcal Atomic # 6 Polarization: 3.25 SS G_CDS: -2.22 Total: 1.04 kcal Atomic # 7 Polarization: 1.94 SS G_CDS: -0.57 Total: 1.37 kcal Atomic # 8 Polarization: -6.42 SS G_CDS: -1.79 Total: -8.20 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.06 Total: -6.75 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -10.34 -9.87 -20.20 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_13422076.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.770 kcal (2) G-P(sol) polarization free energy of solvation -10.336 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.105 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.865 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.201 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.970 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds