Wall clock time and date at job start Sun Mar 7 2021 00:27:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.37789 * 119.84701 * 2 1 4 4 C 1.39704 * 119.90369 * 180.25231 * 3 2 1 5 5 C 1.47538 * 120.19113 * 179.74453 * 4 3 2 6 6 O 1.21595 * 120.00136 * 179.72432 * 5 4 3 7 7 N 1.34772 * 119.99975 * 359.72141 * 5 4 3 8 8 C 1.46498 * 120.00309 * 180.02562 * 7 5 4 9 9 H 1.08999 * 112.84793 * 336.19873 * 8 7 5 10 10 C 1.53959 * 113.74220 * 107.40377 * 8 7 5 11 11 C 1.53781 * 87.01918 * 139.94740 * 10 8 7 12 12 H 1.09001 * 113.61536 * 89.22969 * 11 10 8 13 13 N 1.46498 * 113.61116 * 220.04907 * 11 10 8 14 14 C 1.34777 * 119.99828 * 253.85697 * 13 11 10 15 15 O 1.21513 * 119.99898 * 0.28095 * 14 13 11 16 16 O 1.34638 * 120.00235 * 180.27525 * 14 13 11 17 17 C 1.45195 * 117.00135 * 180.02562 * 16 14 13 18 18 C 1.52999 * 109.47224 * 60.00489 * 17 16 14 19 19 C 1.53005 * 109.47161 * 180.02562 * 17 16 14 20 20 C 1.53002 * 109.47089 * 299.99988 * 17 16 14 21 21 C 1.53776 * 113.61677 * 205.00218 * 8 7 5 22 22 C 1.40145 * 119.61866 * 359.46714 * 4 3 2 23 23 O 1.35647 * 120.14854 * 180.29768 * 22 4 3 24 24 C 1.38709 * 119.69819 * 0.27835 * 22 4 3 25 25 C 1.50700 * 119.95503 * 180.02562 * 24 22 4 26 26 O 1.42886 * 109.47347 * 74.99961 * 25 24 22 27 27 Si 1.86303 * 109.46535 * 194.99851 * 25 24 22 28 28 C 1.38052 * 120.08253 * 359.97438 * 24 22 4 29 29 H 1.08998 * 109.47239 * 270.25361 * 1 2 3 30 30 H 1.08997 * 109.46910 * 30.26391 * 1 2 3 31 31 H 1.09000 * 109.46877 * 150.25673 * 1 2 3 32 32 H 1.07993 * 120.04965 * 0.02562 * 3 2 1 33 33 H 0.97009 * 120.00112 * 0.02562 * 7 5 4 34 34 H 1.08995 * 113.61644 * 25.42418 * 10 8 7 35 35 H 1.09006 * 113.66662 * 254.47389 * 10 8 7 36 36 H 0.97001 * 120.00384 * 74.14144 * 13 11 10 37 37 H 1.08996 * 109.47509 * 59.99392 * 18 17 16 38 38 H 1.09006 * 109.47298 * 180.02562 * 18 17 16 39 39 H 1.09003 * 109.46856 * 299.99470 * 18 17 16 40 40 H 1.08995 * 109.47042 * 59.99563 * 19 17 16 41 41 H 1.08992 * 109.47205 * 180.02562 * 19 17 16 42 42 H 1.09001 * 109.46587 * 300.00252 * 19 17 16 43 43 H 1.09003 * 109.46840 * 60.00621 * 20 17 16 44 44 H 1.09006 * 109.47115 * 179.97438 * 20 17 16 45 45 H 1.08995 * 109.47291 * 299.99982 * 20 17 16 46 46 H 1.09000 * 113.61546 * 105.38674 * 21 8 7 47 47 H 1.08999 * 113.61714 * 334.48342 * 21 8 7 48 48 H 0.96695 * 114.00277 * 90.00218 * 23 22 4 49 49 H 1.09000 * 109.47005 * 314.99491 * 25 24 22 50 50 H 0.96703 * 114.00375 * 179.97438 * 26 25 24 51 51 H 1.48506 * 109.99648 * 178.67988 * 27 25 24 52 52 H 1.48498 * 110.00025 * 299.99673 * 27 25 24 53 53 H 1.08006 * 119.80118 * 180.02562 * 28 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5899 1.1965 -0.0053 5 6 4.3305 2.4725 -0.0111 6 8 5.5465 2.4697 -0.0106 7 7 3.6594 3.6412 -0.0168 8 6 4.3948 4.9082 -0.0231 9 1 5.4021 4.8149 0.3828 10 6 4.3413 5.6493 -1.3715 11 6 4.1911 6.9474 -0.5608 12 1 5.1421 7.4128 -0.3015 13 7 3.2340 7.8933 -1.1398 14 6 3.6765 9.0045 -1.7611 15 8 4.8696 9.2191 -1.8453 16 8 2.7968 9.8767 -2.2884 17 6 3.3447 11.0512 -2.9431 18 6 4.2393 10.6163 -4.1056 19 6 2.2018 11.9183 -3.4751 20 6 4.1701 11.8569 -1.9379 21 6 3.5996 6.0849 0.5666 22 6 4.2837 -0.0211 0.0007 23 8 5.6402 -0.0323 0.0017 24 6 3.5771 -1.2147 0.0060 25 6 4.3174 -2.5274 0.0131 26 8 4.8540 -2.7646 1.3159 27 14 3.1448 -3.9038 -0.4357 28 6 2.1967 -1.2016 0.0059 29 1 -0.3633 0.0045 1.0276 30 1 -0.3633 0.8876 -0.5179 31 1 -0.3633 -0.8923 -0.5098 32 1 1.6512 2.1294 0.0004 33 1 2.6893 3.6435 -0.0168 34 1 3.4640 5.4042 -1.9700 35 1 5.2707 5.5937 -1.9385 36 1 2.2816 7.7221 -1.0725 37 1 3.6513 10.0423 -4.8216 38 1 4.6510 11.4980 -4.5968 39 1 5.0535 9.9988 -3.7261 40 1 1.5648 12.2280 -2.6467 41 1 2.6131 12.7997 -3.9670 42 1 1.6134 11.3444 -4.1911 43 1 4.9843 11.2394 -1.5585 44 1 4.5819 12.7384 -2.4295 45 1 3.5328 12.1667 -1.1098 46 1 3.9309 6.3806 1.5621 47 1 2.5190 5.9592 0.4991 48 1 6.0329 -0.0315 0.8853 49 1 5.1293 -2.4905 -0.7132 50 1 5.3444 -3.5944 1.3943 51 1 3.8697 -5.1996 -0.4634 52 1 2.0331 -3.9646 0.5470 53 1 1.6510 -2.1337 0.0105 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941094_13422088.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:27:38 Heat of formation + Delta-G solvation = -137.834933 kcal Electronic energy + Delta-G solvation = -34867.801812 eV Core-core repulsion = 30093.320926 eV Total energy + Delta-G solvation = -4774.480886 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -42.00818 -41.71087 -40.68025 -39.42533 -38.08162 -37.92849 -37.69125 -35.60265 -34.95171 -33.76991 -33.14011 -32.36040 -28.38256 -28.30899 -27.54927 -26.82273 -26.80376 -26.45459 -24.70440 -22.98320 -21.88311 -21.61561 -21.33486 -20.78070 -19.53420 -19.18183 -18.63455 -18.27414 -18.10923 -17.52732 -17.20002 -17.01756 -16.73704 -16.29840 -16.07366 -15.95281 -15.64803 -15.49844 -15.37823 -15.31708 -15.02453 -14.66670 -14.43159 -14.36094 -14.09317 -13.92831 -13.76409 -13.54020 -13.37394 -13.17688 -13.15692 -12.96337 -12.93340 -12.87555 -12.61785 -12.53339 -12.50326 -12.43755 -12.38193 -12.20911 -12.01045 -11.86642 -11.72305 -11.40760 -11.12815 -10.92853 -10.49475 -10.32016 -10.18505 -9.97647 -9.49806 -4.96270 -0.34996 0.06642 1.12219 1.23663 1.55332 1.68035 1.72803 1.87045 2.06619 2.51862 3.14244 3.17260 3.27562 3.31906 3.46331 3.58472 3.67097 3.73204 3.77403 3.80262 3.82490 3.85224 3.93426 4.11232 4.16602 4.31676 4.42744 4.52805 4.57245 4.59198 4.59849 4.61681 4.63761 4.73334 4.75351 4.82315 4.83142 4.84760 4.86942 4.90763 4.93794 4.97779 4.99330 5.12099 5.19574 5.25094 5.25795 5.26395 5.35213 5.42754 5.49891 5.58271 5.67816 6.38245 6.46404 6.51336 6.67258 7.15352 7.33222 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.094 4.094 3 C -0.059 4.059 4 C -0.180 4.180 5 C 0.558 3.442 6 O -0.564 6.564 7 N -0.698 5.698 8 C 0.125 3.875 9 H 0.100 0.900 10 C -0.162 4.162 11 C 0.142 3.858 12 H 0.104 0.896 13 N -0.684 5.684 14 C 0.642 3.358 15 O -0.596 6.596 16 O -0.367 6.367 17 C 0.128 3.872 18 C -0.181 4.181 19 C -0.137 4.137 20 C -0.180 4.180 21 C -0.128 4.128 22 C 0.161 3.839 23 O -0.492 6.492 24 C -0.119 4.119 25 C -0.088 4.088 26 O -0.556 6.556 27 Si 0.774 3.226 28 C -0.081 4.081 29 H 0.080 0.920 30 H 0.089 0.911 31 H 0.080 0.920 32 H 0.166 0.834 33 H 0.416 0.584 34 H 0.104 0.896 35 H 0.058 0.942 36 H 0.420 0.580 37 H 0.062 0.938 38 H 0.086 0.914 39 H 0.061 0.939 40 H 0.071 0.929 41 H 0.097 0.903 42 H 0.070 0.930 43 H 0.062 0.938 44 H 0.085 0.915 45 H 0.063 0.937 46 H 0.096 0.904 47 H 0.125 0.875 48 H 0.401 0.599 49 H 0.078 0.922 50 H 0.395 0.605 51 H -0.287 1.287 52 H -0.278 1.278 53 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.479 -0.077 -0.469 10.490 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.095 4.095 3 C -0.077 4.077 4 C -0.184 4.184 5 C 0.346 3.654 6 O -0.443 6.443 7 N -0.351 5.351 8 C 0.019 3.981 9 H 0.118 0.882 10 C -0.203 4.203 11 C 0.037 3.963 12 H 0.122 0.878 13 N -0.344 5.344 14 C 0.396 3.604 15 O -0.487 6.487 16 O -0.282 6.282 17 C 0.091 3.909 18 C -0.238 4.238 19 C -0.194 4.194 20 C -0.238 4.238 21 C -0.166 4.166 22 C 0.114 3.886 23 O -0.304 6.304 24 C -0.120 4.120 25 C -0.196 4.196 26 O -0.366 6.366 27 Si 0.677 3.323 28 C -0.099 4.099 29 H 0.099 0.901 30 H 0.108 0.892 31 H 0.099 0.901 32 H 0.183 0.817 33 H 0.255 0.745 34 H 0.122 0.878 35 H 0.077 0.923 36 H 0.258 0.742 37 H 0.081 0.919 38 H 0.105 0.895 39 H 0.080 0.920 40 H 0.090 0.910 41 H 0.116 0.884 42 H 0.089 0.911 43 H 0.081 0.919 44 H 0.104 0.896 45 H 0.082 0.918 46 H 0.115 0.885 47 H 0.143 0.857 48 H 0.260 0.740 49 H 0.096 0.904 50 H 0.245 0.755 51 H -0.214 1.214 52 H -0.205 1.205 53 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -9.744 -0.034 -0.788 9.776 hybrid contribution 1.135 -0.483 1.261 1.764 sum -8.609 -0.517 0.473 8.637 Atomic orbital electron populations 1.20925 0.87835 1.04882 1.03684 1.20125 0.98220 0.91639 0.99475 1.21448 0.90845 0.99918 0.95482 1.20408 0.95154 0.92452 1.10384 1.18319 0.86896 0.84451 0.75737 1.90815 1.15089 1.87908 1.50530 1.45637 1.10756 1.04142 1.74537 1.22183 0.97454 0.81572 0.96917 0.88167 1.24053 1.03382 0.95056 0.97768 1.22228 0.93369 0.86356 0.94349 0.87755 1.44608 1.11545 1.19996 1.58242 1.18447 0.83532 0.80918 0.77506 1.90918 1.16690 1.77453 1.63629 1.86307 1.39369 1.33639 1.68864 1.22344 0.95218 0.81570 0.91747 1.22475 1.00404 1.03385 0.97518 1.21886 0.96652 0.98929 1.01942 1.22477 1.00827 1.00962 0.99491 1.23703 1.02451 0.91724 0.98732 1.18538 0.83603 0.90897 0.95543 1.84636 1.15431 1.96080 1.34214 1.19740 0.94178 0.93469 1.04566 1.25029 1.04505 1.02238 0.87801 1.86495 1.74113 1.45883 1.30136 0.93916 0.77317 0.73350 0.87669 1.21371 0.92208 0.99825 0.96460 0.90106 0.89228 0.90107 0.81656 0.74458 0.87763 0.92323 0.74183 0.91909 0.89547 0.91967 0.91025 0.88432 0.91117 0.91892 0.89573 0.91766 0.88523 0.85667 0.74007 0.90427 0.75487 1.21363 1.20493 0.83367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.11 10.00 71.24 0.71 1.82 16 2 C -0.09 0.35 5.87 -19.89 -0.12 0.24 16 3 C -0.06 0.21 9.18 22.52 0.21 0.42 16 4 C -0.18 -0.71 5.89 -20.01 -0.12 -0.83 16 5 C 0.56 3.51 7.76 86.70 0.67 4.18 16 6 O -0.56 -8.68 14.76 16.90 0.25 -8.43 16 7 N -0.70 1.67 5.31 -442.92 -2.35 -0.69 16 8 C 0.12 -0.22 4.24 45.58 0.19 -0.03 16 9 H 0.10 0.35 7.46 -2.39 -0.02 0.33 16 10 C -0.16 0.16 7.70 31.18 0.24 0.40 16 11 C 0.14 -0.28 4.22 45.52 0.19 -0.09 16 12 H 0.10 0.26 7.50 -2.39 -0.02 0.24 16 13 N -0.68 1.06 5.37 -567.60 -3.05 -1.98 16 14 C 0.64 3.84 8.06 129.79 1.05 4.89 16 15 O -0.60 -7.33 11.50 19.80 0.23 -7.10 16 16 O -0.37 -1.68 9.94 -55.48 -0.55 -2.23 16 17 C 0.13 0.34 1.13 -10.79 -0.01 0.33 16 18 C -0.18 -0.64 8.37 71.98 0.60 -0.04 16 19 C -0.14 0.36 8.85 71.98 0.64 0.99 16 20 C -0.18 -0.57 8.37 71.98 0.60 0.03 16 21 C -0.13 1.00 7.58 31.12 0.24 1.24 16 22 C 0.16 1.18 6.69 22.85 0.15 1.33 16 23 O -0.49 -5.16 10.91 -68.70 -0.75 -5.91 16 24 C -0.12 -0.45 5.30 -19.80 -0.10 -0.56 16 25 C -0.09 -0.16 2.37 71.24 0.17 0.01 16 26 O -0.56 -1.84 12.86 -148.98 -1.92 -3.76 16 27 Si 0.77 -1.77 30.19 68.60 2.07 0.30 16 28 C -0.08 0.05 8.30 22.30 0.19 0.23 16 29 H 0.08 -0.80 8.14 -2.39 -0.02 -0.82 16 30 H 0.09 -1.12 8.08 -2.39 -0.02 -1.14 16 31 H 0.08 -0.84 8.08 -2.39 -0.02 -0.86 16 32 H 0.17 -1.92 6.40 -2.91 -0.02 -1.94 16 33 H 0.42 -4.10 6.76 -92.70 -0.63 -4.73 16 34 H 0.10 -0.37 8.14 -2.39 -0.02 -0.39 16 35 H 0.06 0.25 8.14 -2.38 -0.02 0.23 16 36 H 0.42 -3.13 8.82 -92.71 -0.82 -3.95 16 37 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 38 H 0.09 0.02 8.14 -2.38 -0.02 0.00 16 39 H 0.06 0.58 5.88 -2.39 -0.01 0.56 16 40 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 41 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 42 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 43 H 0.06 0.55 5.88 -2.39 -0.01 0.54 16 44 H 0.09 -0.01 8.14 -2.38 -0.02 -0.03 16 45 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 46 H 0.10 -0.79 8.14 -2.39 -0.02 -0.81 16 47 H 0.13 -1.70 8.09 -2.39 -0.02 -1.72 16 48 H 0.40 2.53 9.06 -74.06 -0.67 1.86 16 49 H 0.08 0.15 7.83 -2.39 -0.02 0.14 16 50 H 0.39 -1.70 8.74 -74.06 -0.65 -2.34 16 51 H -0.29 -0.64 7.11 99.48 0.71 0.06 16 52 H -0.28 -0.49 6.74 99.48 0.67 0.18 16 53 H 0.15 -0.57 4.87 -2.91 -0.01 -0.58 16 Total: 0.00 -28.82 427.58 -2.34 -31.16 By element: Atomic # 1 Polarization: -14.15 SS G_CDS: -1.77 Total: -15.92 kcal Atomic # 6 Polarization: 9.06 SS G_CDS: 5.50 Total: 14.56 kcal Atomic # 7 Polarization: 2.73 SS G_CDS: -5.40 Total: -2.67 kcal Atomic # 8 Polarization: -24.69 SS G_CDS: -2.74 Total: -27.43 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: 2.07 Total: 0.30 kcal Total: -28.82 -2.34 -31.16 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_13422088.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.674 kcal (2) G-P(sol) polarization free energy of solvation -28.820 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.341 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.160 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.835 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds