Wall clock time and date at job start Sun Mar 7 2021 00:27:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52994 * 109.47363 * 2 1 4 4 C 1.53000 * 109.46724 * 239.99790 * 2 1 3 5 5 O 1.45201 * 109.47005 * 120.00246 * 2 1 3 6 6 C 1.34640 * 117.00084 * 59.99754 * 5 2 1 7 7 O 1.21507 * 119.99886 * 359.97438 * 6 5 2 8 8 N 1.34781 * 119.99814 * 180.02562 * 6 5 2 9 9 C 1.46496 * 119.99572 * 179.97438 * 8 6 5 10 10 H 1.09001 * 112.85554 * 336.19589 * 9 8 6 11 11 C 1.53955 * 113.66330 * 107.44303 * 9 8 6 12 12 C 1.53791 * 87.01917 * 139.93133 * 11 9 8 13 13 H 1.08996 * 113.61486 * 89.23214 * 12 11 9 14 14 N 1.46505 * 113.61264 * 220.04706 * 12 11 9 15 15 C 1.34777 * 119.99724 * 254.13682 * 14 12 11 16 16 O 1.21613 * 120.00252 * 359.97438 * 15 14 12 17 17 C 1.47382 * 119.99755 * 179.72668 * 15 14 12 18 18 C 1.36415 * 127.19124 * 0.29611 * 17 15 14 19 19 O 1.33649 * 108.39982 * 179.97438 * 18 17 15 20 20 C 1.34218 * 110.90427 * 0.02562 * 19 18 17 21 21 C 1.50706 * 125.43684 * 180.02562 * 20 19 18 22 22 O 1.42898 * 109.46704 * 245.02118 * 21 20 19 23 23 Si 1.86296 * 109.46957 * 5.01964 * 21 20 19 24 24 C 1.34177 * 109.12538 * 359.72926 * 20 19 18 25 25 C 1.53775 * 87.17102 * 334.63646 * 12 11 9 26 26 H 1.08999 * 109.46694 * 299.99917 * 1 2 3 27 27 H 1.08996 * 109.46985 * 59.99442 * 1 2 3 28 28 H 1.08991 * 109.47235 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47142 * 180.02562 * 3 2 1 30 30 H 1.09000 * 109.47043 * 300.00194 * 3 2 1 31 31 H 1.08999 * 109.47148 * 60.00361 * 3 2 1 32 32 H 1.09004 * 109.47584 * 299.99877 * 4 2 1 33 33 H 1.09000 * 109.47031 * 60.00205 * 4 2 1 34 34 H 1.09003 * 109.46895 * 180.02562 * 4 2 1 35 35 H 0.96994 * 120.00208 * 359.97438 * 8 6 5 36 36 H 1.08992 * 113.61969 * 25.41138 * 11 9 8 37 37 H 1.09006 * 113.66413 * 254.45224 * 11 9 8 38 38 H 0.97000 * 119.99792 * 74.13250 * 14 12 11 39 39 H 1.08010 * 125.80183 * 359.95704 * 18 17 15 40 40 H 1.08997 * 109.46966 * 125.02074 * 21 20 19 41 41 H 0.96700 * 113.99815 * 179.97438 * 22 21 20 42 42 H 1.48493 * 110.00407 * 300.00165 * 23 21 20 43 43 H 1.48499 * 109.99905 * 61.32088 * 23 21 20 44 44 H 1.07997 * 127.02414 * 180.26763 * 24 20 19 45 45 H 1.08996 * 113.61556 * 139.93979 * 25 12 11 46 46 H 1.09005 * 113.61870 * 270.84225 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0399 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9724 1.3383 7 8 0.9508 -2.5094 0.5040 8 7 2.0672 -2.6655 2.4172 9 6 1.6730 -4.0666 2.5836 10 1 0.7586 -4.3160 2.0452 11 6 2.8211 -5.0641 2.3444 12 6 2.2719 -5.8595 3.5406 13 1 1.5220 -6.6008 3.2648 14 7 3.3160 -6.4037 4.4125 15 6 3.5955 -7.7219 4.3872 16 8 2.9809 -8.4597 3.6409 17 6 4.6500 -8.2685 5.2599 18 6 5.4246 -7.5805 6.1473 19 8 6.2563 -8.4435 6.7388 20 6 6.0638 -9.6883 6.2753 21 6 6.8233 -10.9126 6.7177 22 8 7.5876 -11.4204 5.6223 23 14 7.9674 -10.4616 8.1171 24 6 5.0828 -9.6699 5.3601 25 6 1.6734 -4.5369 4.0478 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 -0.3633 -1.0276 0.0005 29 1 3.1301 1.4424 -0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6768 1.9562 0.8900 32 1 1.6766 -1.7490 -1.2492 33 1 1.6766 -0.2075 -2.1392 34 1 3.1300 -0.7217 -1.2490 35 1 2.6268 -2.2367 3.0833 36 1 3.8104 -4.6412 2.5185 37 1 2.7479 -5.5961 1.3958 38 1 3.8060 -5.8153 5.0079 39 1 5.3746 -6.5188 6.3391 40 1 6.1201 -11.6743 7.0543 41 1 8.1034 -12.2102 5.8353 42 1 8.9310 -9.4236 7.6709 43 1 7.1821 -9.9618 9.2741 44 1 4.6924 -10.5121 4.8082 45 1 0.6752 -4.6437 4.4723 46 1 2.3484 -3.9694 4.6885 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_13456056.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:27:54 Heat of formation + Delta-G solvation = -98.455966 kcal Electronic energy + Delta-G solvation = -28842.334200 eV Core-core repulsion = 24508.862293 eV Total energy + Delta-G solvation = -4333.471908 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.161 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -43.77480 -41.86592 -41.03038 -39.52218 -37.99015 -37.81476 -35.50949 -34.90779 -34.09401 -33.30547 -31.83623 -28.32983 -28.28427 -26.99616 -26.96922 -26.22031 -24.57066 -22.85380 -22.24086 -21.60186 -21.01634 -20.62758 -19.18574 -18.89245 -18.74692 -18.05826 -17.41379 -17.20520 -17.11576 -17.07206 -16.30624 -16.18015 -15.88250 -15.82667 -15.49472 -15.35128 -15.26182 -14.64964 -14.34896 -14.18355 -14.14283 -13.94335 -13.75137 -13.74672 -13.42818 -13.14090 -12.87017 -12.82761 -12.76752 -12.59068 -12.49038 -12.38349 -12.19905 -12.12148 -12.04301 -11.29903 -11.06549 -10.96550 -10.90851 -10.57660 -10.30499 -10.08066 -9.83790 -5.15539 0.16699 0.84270 1.07467 1.15383 1.50810 1.61468 1.86090 1.94498 2.01010 2.28918 3.09420 3.15119 3.24995 3.34555 3.48887 3.55053 3.68752 3.71694 3.77917 3.81075 3.83382 3.97275 4.13735 4.30527 4.40627 4.43915 4.44190 4.55094 4.56324 4.63218 4.65719 4.67823 4.73558 4.78270 4.85592 4.90212 4.93438 4.95588 5.08371 5.17984 5.24286 5.37075 5.38472 5.47123 5.59203 5.79629 6.34440 6.39948 6.42023 7.14277 7.41263 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.651 3.349 7 O -0.564 6.564 8 N -0.701 5.701 9 C 0.144 3.856 10 H 0.126 0.874 11 C -0.166 4.166 12 C 0.129 3.871 13 H 0.124 0.876 14 N -0.717 5.717 15 C 0.591 3.409 16 O -0.527 6.527 17 C -0.236 4.236 18 C 0.031 3.969 19 O -0.173 6.173 20 C -0.015 4.015 21 C -0.037 4.037 22 O -0.543 6.543 23 Si 0.712 3.288 24 C -0.117 4.117 25 C -0.152 4.152 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.406 0.594 36 H 0.091 0.909 37 H 0.083 0.917 38 H 0.399 0.601 39 H 0.214 0.786 40 H 0.096 0.904 41 H 0.391 0.609 42 H -0.250 1.250 43 H -0.253 1.253 44 H 0.165 0.835 45 H 0.090 0.910 46 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.272 0.961 5.519 6.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.453 6.453 8 N -0.359 5.359 9 C 0.040 3.960 10 H 0.144 0.856 11 C -0.207 4.207 12 C 0.023 3.977 13 H 0.142 0.858 14 N -0.368 5.368 15 C 0.379 3.621 16 O -0.403 6.403 17 C -0.240 4.240 18 C -0.040 4.040 19 O -0.070 6.070 20 C -0.063 4.063 21 C -0.146 4.146 22 O -0.351 6.351 23 Si 0.611 3.389 24 C -0.137 4.137 25 C -0.191 4.191 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.241 0.759 36 H 0.109 0.891 37 H 0.102 0.898 38 H 0.233 0.767 39 H 0.230 0.770 40 H 0.114 0.886 41 H 0.240 0.760 42 H -0.174 1.174 43 H -0.177 1.177 44 H 0.182 0.818 45 H 0.108 0.892 46 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 2.680 1.433 4.930 5.791 hybrid contribution -0.110 0.745 0.032 0.753 sum 2.570 2.178 4.962 5.997 Atomic orbital electron populations 1.22522 0.93810 1.05070 1.02725 1.22125 0.94468 0.91546 0.81852 1.21877 1.02315 0.92358 1.03345 1.22524 1.01597 1.03480 0.96544 1.86304 1.71500 1.23441 1.46773 1.18156 0.78627 0.80571 0.82239 1.90924 1.40850 1.70495 1.42997 1.44658 1.55448 1.12004 1.23777 1.22319 0.99327 0.77719 0.96683 0.85644 1.24088 0.99394 0.97178 1.00011 1.22259 0.90720 0.94211 0.90461 0.85811 1.45728 1.39443 1.08083 1.43579 1.17253 0.81659 0.81757 0.81467 1.90827 1.51088 1.58384 1.39995 1.21515 1.03273 0.95053 1.04183 1.24462 0.90694 0.95245 0.93566 1.83704 1.51282 1.16837 1.55151 1.21182 1.00441 0.83907 1.00781 1.23829 1.00210 0.92036 0.98537 1.86474 1.63758 1.49197 1.35637 0.95097 0.81333 0.86341 0.76120 1.22514 0.96699 0.95996 0.98464 1.23795 1.03141 0.95723 0.96467 0.92126 0.90903 0.89411 0.91417 0.89910 0.91402 0.89402 0.90903 0.92139 0.75867 0.89060 0.89809 0.76681 0.76971 0.88608 0.75970 1.17364 1.17729 0.81778 0.89169 0.88728 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.09 8.85 37.15 0.33 0.42 16 4 C -0.18 -0.29 8.37 37.16 0.31 0.02 16 5 O -0.37 -0.85 9.94 -40.32 -0.40 -1.25 16 6 C 0.65 1.73 8.06 54.06 0.44 2.17 16 7 O -0.56 -2.91 11.48 -19.28 -0.22 -3.13 16 8 N -0.70 0.42 5.36 -57.84 -0.31 0.11 16 9 C 0.14 -0.18 4.24 -67.03 -0.28 -0.46 16 10 H 0.13 0.03 7.46 -51.93 -0.39 -0.36 16 11 C -0.17 0.15 7.69 -25.82 -0.20 -0.05 16 12 C 0.13 -0.15 4.21 -67.11 -0.28 -0.43 16 13 H 0.12 0.06 7.50 -51.93 -0.39 -0.33 16 14 N -0.72 0.82 5.35 -54.10 -0.29 0.53 16 15 C 0.59 1.66 7.81 -12.54 -0.10 1.56 16 16 O -0.53 -3.67 16.60 5.27 0.09 -3.59 16 17 C -0.24 -0.50 6.31 -103.28 -0.65 -1.15 16 18 C 0.03 -0.01 11.61 30.08 0.35 0.34 16 19 O -0.17 -0.35 8.90 7.65 0.07 -0.28 16 20 C -0.02 -0.04 6.22 -35.74 -0.22 -0.26 16 21 C -0.04 0.03 2.96 36.01 0.11 0.13 16 22 O -0.54 0.24 12.86 -35.23 -0.45 -0.22 16 23 Si 0.71 -1.20 32.09 -169.99 -5.46 -6.66 16 24 C -0.12 -0.37 10.90 -37.46 -0.41 -0.78 16 25 C -0.15 0.52 7.58 -25.92 -0.20 0.32 16 26 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 27 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 28 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 29 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.09 0.33 5.88 -51.93 -0.31 0.02 16 33 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 34 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 35 H 0.41 -1.17 8.84 -40.82 -0.36 -1.53 16 36 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 38 H 0.40 -1.76 7.68 -40.82 -0.31 -2.07 16 39 H 0.21 -1.15 7.47 -52.48 -0.39 -1.54 16 40 H 0.10 -0.29 7.96 -51.93 -0.41 -0.70 16 41 H 0.39 -2.34 8.74 45.56 0.40 -1.94 16 42 H -0.25 -0.52 7.11 56.52 0.40 -0.11 16 43 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 44 H 0.16 0.49 8.06 -52.49 -0.42 0.07 16 45 H 0.09 -0.31 8.14 -51.93 -0.42 -0.74 16 46 H 0.09 -0.49 8.09 -51.93 -0.42 -0.91 16 LS Contribution 386.11 15.07 5.82 5.82 Total: 0.00 -12.15 386.11 -8.50 -20.65 By element: Atomic # 1 Polarization: -7.22 SS G_CDS: -6.74 Total: -13.96 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -0.60 Total: 1.98 kcal Atomic # 7 Polarization: 1.24 SS G_CDS: -0.60 Total: 0.64 kcal Atomic # 8 Polarization: -7.55 SS G_CDS: -0.92 Total: -8.47 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.46 Total: -6.66 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -12.15 -8.50 -20.65 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_13456056.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.811 kcal (2) G-P(sol) polarization free energy of solvation -12.150 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.960 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.496 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.645 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds