Wall clock time and date at job start Sun Mar 7 2021 00:28:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53007 * 109.46792 * 2 1 4 4 C 1.52997 * 109.47249 * 240.00443 * 2 1 3 5 5 O 1.45200 * 109.47000 * 120.00084 * 2 1 3 6 6 C 1.34634 * 117.00044 * 60.00060 * 5 2 1 7 7 O 1.21518 * 119.99913 * 0.02562 * 6 5 2 8 8 N 1.34777 * 120.00031 * 179.97438 * 6 5 2 9 9 C 1.46496 * 119.99875 * 180.02562 * 8 6 5 10 10 H 1.09001 * 112.85020 * 336.19358 * 9 8 6 11 11 C 1.53954 * 113.67032 * 107.44038 * 9 8 6 12 12 C 1.53776 * 87.02235 * 139.93277 * 11 9 8 13 13 H 1.09000 * 113.61848 * 89.23056 * 12 11 9 14 14 N 1.46499 * 113.61438 * 220.05154 * 12 11 9 15 15 C 1.34772 * 119.99962 * 254.13242 * 14 12 11 16 16 O 1.21277 * 120.00084 * 0.02562 * 15 14 12 17 17 C 1.50703 * 120.00140 * 179.97438 * 15 14 12 18 18 C 1.50699 * 109.47290 * 180.02562 * 17 15 14 19 19 C 1.34846 * 125.89294 * 274.96437 * 18 17 15 20 20 C 1.40894 * 107.41755 * 180.02562 * 19 18 17 21 21 C 1.34850 * 107.41649 * 359.97438 * 20 19 18 22 22 C 1.50699 * 125.88843 * 180.26479 * 21 20 19 23 23 O 1.42902 * 109.46950 * 119.69434 * 22 21 20 24 24 Si 1.86301 * 109.47319 * 359.69020 * 22 21 20 25 25 N 1.36342 * 125.88655 * 94.99999 * 18 17 15 26 26 C 1.53778 * 113.61529 * 205.00156 * 9 8 6 27 27 H 1.09001 * 109.46946 * 300.00144 * 1 2 3 28 28 H 1.08999 * 109.46940 * 59.99985 * 1 2 3 29 29 H 1.08997 * 109.47077 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.46882 * 179.97438 * 3 2 1 31 31 H 1.08997 * 109.47382 * 300.00281 * 3 2 1 32 32 H 1.09006 * 109.46800 * 60.00127 * 3 2 1 33 33 H 1.09007 * 109.47098 * 299.99893 * 4 2 1 34 34 H 1.08997 * 109.47060 * 59.99636 * 4 2 1 35 35 H 1.09001 * 109.47197 * 179.97438 * 4 2 1 36 36 H 0.96998 * 120.00059 * 359.97438 * 8 6 5 37 37 H 1.09001 * 113.61197 * 25.40775 * 11 9 8 38 38 H 1.08995 * 113.66456 * 254.46110 * 11 9 8 39 39 H 0.97004 * 120.00055 * 74.13542 * 14 12 11 40 40 H 1.09001 * 109.46788 * 60.00089 * 17 15 14 41 41 H 1.09002 * 109.47126 * 300.00615 * 17 15 14 42 42 H 1.07995 * 126.29415 * 0.05120 * 19 18 17 43 43 H 1.08004 * 126.29068 * 180.02562 * 20 19 18 44 44 H 1.09007 * 109.47025 * 239.69082 * 22 21 20 45 45 H 0.96696 * 113.99683 * 299.99627 * 23 22 21 46 46 H 1.48497 * 109.99856 * 58.68236 * 24 22 21 47 47 H 1.48500 * 110.00065 * 179.97438 * 24 22 21 48 48 H 0.97000 * 125.63973 * 359.97438 * 25 18 17 49 49 H 1.09003 * 113.61843 * 105.46577 * 26 9 8 50 50 H 1.08998 * 113.61240 * 334.56439 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0401 -0.7211 -1.2493 5 8 2.0140 -0.6845 1.1856 6 6 1.6523 -1.9723 1.3383 7 8 0.9516 -2.5097 0.5035 8 7 2.0681 -2.6657 2.4166 9 6 1.6749 -4.0672 2.5825 10 1 0.7604 -4.3168 2.0443 11 6 2.8234 -5.0639 2.3424 12 6 2.2752 -5.8602 3.5383 13 1 1.5255 -6.6018 3.2624 14 7 3.3199 -6.4042 4.4095 15 6 3.6002 -7.7222 4.3834 16 8 2.9880 -8.4578 3.6385 17 6 4.6752 -8.2818 5.2792 18 6 4.7901 -9.7680 5.0581 19 6 4.0418 -10.7165 5.6570 20 6 4.4746 -11.9655 5.1692 21 6 5.4704 -11.7325 4.2903 22 6 6.2292 -12.7799 3.5169 23 8 6.0518 -12.5596 2.1162 24 14 5.5872 -14.4702 3.9660 25 7 5.6691 -10.3855 4.2184 26 6 1.6761 -4.5382 4.0464 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 3.1300 1.4426 0.0005 31 1 1.6766 1.9564 -0.8899 32 1 1.6766 1.9564 0.8901 33 1 1.6767 -1.7489 -1.2493 34 1 1.6767 -0.2073 -2.1392 35 1 3.1301 -0.7207 -1.2495 36 1 2.6282 -2.2371 3.0824 37 1 3.8126 -4.6404 2.5163 38 1 2.7502 -5.5953 1.3936 39 1 3.8098 -5.8158 5.0051 40 1 4.4178 -8.0878 6.3205 41 1 5.6273 -7.8053 5.0455 42 1 3.2551 -10.5496 6.3778 43 1 4.0805 -12.9318 5.4473 44 1 7.2892 -12.7167 3.7632 45 1 5.1306 -12.6015 1.8251 46 1 4.1358 -14.5587 3.6645 47 1 6.3270 -15.5120 3.2095 48 1 6.3267 -9.9402 3.6616 49 1 0.6781 -4.6458 4.4713 50 1 2.3510 -3.9707 4.6871 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_14644196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:28:00 Heat of formation + Delta-G solvation = -78.585631 kcal Electronic energy + Delta-G solvation = -30655.400377 eV Core-core repulsion = 26264.971154 eV Total energy + Delta-G solvation = -4390.429222 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.30416 -41.86472 -41.03407 -39.60612 -37.86731 -37.71989 -35.50187 -34.86098 -33.66680 -32.78202 -31.85074 -29.44129 -28.34140 -28.29797 -26.98062 -26.16725 -24.94352 -23.17768 -21.84553 -21.56235 -21.27960 -21.02382 -20.72838 -19.16055 -18.92196 -18.21105 -18.04746 -17.27087 -17.09195 -16.86812 -16.44058 -16.34973 -16.19111 -15.77110 -15.43178 -15.29495 -15.18097 -14.84980 -14.52728 -14.38444 -14.27670 -14.04218 -13.93570 -13.76715 -13.73361 -13.52858 -13.43730 -13.15375 -12.88156 -12.84957 -12.83903 -12.56897 -12.49944 -12.38628 -12.20822 -12.10717 -12.04353 -11.73680 -11.31244 -10.97944 -10.90703 -10.75242 -10.30072 -10.06241 -9.71083 -8.90233 -4.87029 1.09278 1.17591 1.34278 1.57291 1.72336 1.84978 1.90101 2.00310 2.27948 2.50508 3.08846 3.22577 3.33024 3.39798 3.60210 3.66653 3.71398 3.76597 3.82063 3.85119 3.91885 3.95947 3.99337 4.32717 4.39459 4.41638 4.44288 4.47253 4.55096 4.60190 4.61841 4.65642 4.67108 4.76972 4.82923 4.84222 4.86908 4.92090 4.94816 5.07228 5.23913 5.32461 5.35624 5.36086 5.38939 5.45823 5.57936 6.04845 6.20071 6.34902 6.39359 6.42100 6.66487 7.16805 7.39927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.650 3.350 7 O -0.565 6.565 8 N -0.700 5.700 9 C 0.144 3.856 10 H 0.125 0.875 11 C -0.166 4.166 12 C 0.128 3.872 13 H 0.121 0.879 14 N -0.722 5.722 15 C 0.512 3.488 16 O -0.521 6.521 17 C -0.072 4.072 18 C 0.035 3.965 19 C -0.172 4.172 20 C -0.186 4.186 21 C -0.009 4.009 22 C -0.055 4.055 23 O -0.537 6.537 24 Si 0.714 3.286 25 N -0.535 5.535 26 C -0.152 4.152 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.059 0.941 36 H 0.406 0.594 37 H 0.090 0.910 38 H 0.081 0.919 39 H 0.402 0.598 40 H 0.118 0.882 41 H 0.100 0.900 42 H 0.137 0.863 43 H 0.142 0.858 44 H 0.114 0.886 45 H 0.380 0.620 46 H -0.257 1.257 47 H -0.258 1.258 48 H 0.412 0.588 49 H 0.089 0.911 50 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.723 4.229 5.903 7.755 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.453 6.453 8 N -0.359 5.359 9 C 0.039 3.961 10 H 0.142 0.858 11 C -0.207 4.207 12 C 0.022 3.978 13 H 0.139 0.861 14 N -0.374 5.374 15 C 0.298 3.702 16 O -0.395 6.395 17 C -0.113 4.113 18 C -0.079 4.079 19 C -0.197 4.197 20 C -0.211 4.211 21 C -0.122 4.122 22 C -0.165 4.165 23 O -0.344 6.344 24 Si 0.614 3.386 25 N -0.130 5.130 26 C -0.191 4.191 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.241 0.759 37 H 0.109 0.891 38 H 0.099 0.901 39 H 0.236 0.764 40 H 0.136 0.864 41 H 0.118 0.882 42 H 0.154 0.846 43 H 0.159 0.841 44 H 0.132 0.868 45 H 0.228 0.772 46 H -0.181 1.181 47 H -0.183 1.183 48 H 0.249 0.751 49 H 0.107 0.893 50 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 2.280 2.887 4.509 5.820 hybrid contribution 0.282 1.509 -0.662 1.672 sum 2.562 4.396 3.848 6.379 Atomic orbital electron populations 1.22524 0.93804 1.05064 1.02738 1.22126 0.94474 0.91550 0.81841 1.21881 1.02310 0.92345 1.03357 1.22523 1.01581 1.03476 0.96561 1.86303 1.71482 1.23441 1.46770 1.18163 0.78629 0.80576 0.82245 1.90927 1.40923 1.70499 1.42969 1.44662 1.55401 1.11983 1.23830 1.22322 0.99284 0.77690 0.96801 0.85758 1.24072 0.99360 0.97255 0.99984 1.22210 0.90905 0.94129 0.90521 0.86104 1.45912 1.39319 1.08594 1.43576 1.20662 0.84257 0.81889 0.83395 1.90775 1.50830 1.58132 1.39751 1.20140 0.98934 0.90671 1.01529 1.19473 0.96959 0.92812 0.98610 1.20587 1.02513 0.91603 1.05004 1.20656 0.99906 0.98520 1.02027 1.20788 1.02926 0.83966 1.04526 1.24784 1.04000 1.05795 0.81895 1.86561 1.32486 1.93468 1.21880 0.94458 0.79822 0.73466 0.90877 1.41788 1.30309 1.06088 1.34830 1.23786 1.03118 0.95829 0.96359 0.92099 0.90908 0.89426 0.91416 0.89908 0.91389 0.89416 0.90907 0.92149 0.75855 0.89140 0.90071 0.76354 0.86370 0.88212 0.84561 0.84078 0.86776 0.77211 1.18150 1.18324 0.75119 0.89274 0.88686 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.23 8.37 37.16 0.31 0.08 16 2 C 0.14 0.17 1.13 -90.62 -0.10 0.06 16 3 C -0.14 0.12 8.85 37.16 0.33 0.45 16 4 C -0.18 -0.26 8.37 37.16 0.31 0.06 16 5 O -0.37 -0.78 9.94 -40.31 -0.40 -1.18 16 6 C 0.65 1.60 8.06 54.06 0.44 2.04 16 7 O -0.56 -2.83 11.48 -19.29 -0.22 -3.05 16 8 N -0.70 0.59 5.36 -57.85 -0.31 0.28 16 9 C 0.14 -0.21 4.24 -67.03 -0.28 -0.50 16 10 H 0.12 0.01 7.46 -51.93 -0.39 -0.37 16 11 C -0.17 0.23 7.69 -25.83 -0.20 0.04 16 12 C 0.13 -0.24 4.21 -67.12 -0.28 -0.52 16 13 H 0.12 0.02 7.50 -51.93 -0.39 -0.37 16 14 N -0.72 1.98 5.36 -53.02 -0.28 1.70 16 15 C 0.51 0.10 7.82 -10.99 -0.09 0.01 16 16 O -0.52 -2.70 15.65 5.56 0.09 -2.61 16 17 C -0.07 0.16 6.24 -29.03 -0.18 -0.02 16 18 C 0.04 0.04 5.66 -81.79 -0.46 -0.43 16 19 C -0.17 -0.35 10.76 -39.78 -0.43 -0.78 16 20 C -0.19 -0.35 9.37 -39.78 -0.37 -0.72 16 21 C -0.01 -0.01 6.50 -81.79 -0.53 -0.55 16 22 C -0.06 -0.03 3.08 36.00 0.11 0.08 16 23 O -0.54 -1.21 12.88 -35.23 -0.45 -1.67 16 24 Si 0.71 -0.20 30.59 -169.99 -5.20 -5.40 16 25 N -0.54 -0.58 6.07 -5.44 -0.03 -0.61 16 26 C -0.15 0.57 7.58 -25.92 -0.20 0.38 16 27 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 28 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 29 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.09 0.31 5.88 -51.93 -0.31 0.01 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 36 H 0.41 -1.27 8.84 -40.82 -0.36 -1.63 16 37 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 38 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 39 H 0.40 -2.33 8.71 -40.82 -0.36 -2.69 16 40 H 0.12 -0.54 8.14 -51.93 -0.42 -0.96 16 41 H 0.10 -0.45 8.14 -51.93 -0.42 -0.88 16 42 H 0.14 0.11 8.06 -52.49 -0.42 -0.31 16 43 H 0.14 0.03 6.22 -52.48 -0.33 -0.29 16 44 H 0.11 -0.06 7.96 -51.92 -0.41 -0.47 16 45 H 0.38 0.10 8.70 45.56 0.40 0.50 16 46 H -0.26 -0.58 7.11 56.52 0.40 -0.17 16 47 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 48 H 0.41 -0.20 8.96 -40.82 -0.37 -0.56 16 49 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 50 H 0.09 -0.52 8.09 -51.93 -0.42 -0.94 16 LS Contribution 409.47 15.07 6.17 6.17 Total: 0.00 -10.82 409.47 -10.20 -21.02 By element: Atomic # 1 Polarization: -6.40 SS G_CDS: -7.93 Total: -14.33 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: -1.63 Total: -0.33 kcal Atomic # 7 Polarization: 2.00 SS G_CDS: -0.63 Total: 1.37 kcal Atomic # 8 Polarization: -7.52 SS G_CDS: -0.99 Total: -8.50 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.20 Total: -5.40 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -10.82 -10.20 -21.02 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_14644196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.568 kcal (2) G-P(sol) polarization free energy of solvation -10.816 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.384 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.202 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.018 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds