Wall clock time and date at job start Sun Mar 7 2021 00:28:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53005 * 109.47327 * 2 1 4 4 C 1.53001 * 109.47408 * 240.00034 * 2 1 3 5 5 O 1.45194 * 109.47326 * 119.99753 * 2 1 3 6 6 C 1.34643 * 117.00160 * 60.00130 * 5 2 1 7 7 O 1.21519 * 119.99312 * 0.02562 * 6 5 2 8 8 N 1.34772 * 120.00578 * 179.97438 * 6 5 2 9 9 C 1.46499 * 120.00272 * 179.97438 * 8 6 5 10 10 H 1.09001 * 112.84471 * 29.10220 * 9 8 6 11 11 C 1.53779 * 113.61558 * 160.29909 * 9 8 6 12 12 C 1.53780 * 87.07994 * 89.11999 * 11 9 8 13 13 H 1.08999 * 113.61536 * 140.06731 * 12 11 9 14 14 N 1.46499 * 113.61298 * 270.88438 * 12 11 9 15 15 C 1.34778 * 119.99955 * 199.34924 * 14 12 11 16 16 O 1.21285 * 120.00116 * 0.26919 * 15 14 12 17 17 C 1.50703 * 119.99944 * 180.27718 * 15 14 12 18 18 C 1.53043 * 109.32842 * 144.34867 * 17 15 14 19 19 C 1.53541 * 108.56019 * 169.82734 * 18 17 15 20 20 N 1.47033 * 107.66187 * 299.04982 * 19 18 17 21 21 C 1.38928 * 118.87965 * 43.66542 * 20 19 18 22 22 C 1.31116 * 121.84775 * 346.68032 * 21 20 19 23 23 C 1.50703 * 118.54526 * 180.42952 * 22 21 20 24 24 O 1.42901 * 109.46988 * 102.13284 * 23 22 21 25 25 Si 1.86306 * 109.46836 * 342.13730 * 23 22 21 26 26 C 1.53778 * 87.08185 * 25.43230 * 12 11 9 27 27 H 1.08998 * 109.47116 * 299.99999 * 1 2 3 28 28 H 1.09001 * 109.46617 * 60.00369 * 1 2 3 29 29 H 1.09003 * 109.47022 * 179.97438 * 1 2 3 30 30 H 1.09002 * 109.47381 * 179.97438 * 3 2 1 31 31 H 1.09000 * 109.46648 * 300.00124 * 3 2 1 32 32 H 1.08998 * 109.47022 * 59.99943 * 3 2 1 33 33 H 1.09003 * 109.47152 * 300.00072 * 4 2 1 34 34 H 1.09000 * 109.47142 * 59.99524 * 4 2 1 35 35 H 1.09002 * 109.47319 * 179.97438 * 4 2 1 36 36 H 0.96995 * 119.99710 * 0.02562 * 8 6 5 37 37 H 1.09000 * 113.61492 * 334.56900 * 11 9 8 38 38 H 1.08998 * 113.69109 * 203.67741 * 11 9 8 39 39 H 0.97001 * 120.00164 * 19.61994 * 14 12 11 40 40 H 1.08994 * 109.32789 * 24.69354 * 17 15 14 41 41 H 1.08995 * 109.62299 * 289.55135 * 18 17 15 42 42 H 1.08996 * 109.62435 * 50.10615 * 18 17 15 43 43 H 1.09002 * 109.82055 * 58.59066 * 19 18 17 44 44 H 1.09002 * 109.82327 * 179.51171 * 19 18 17 45 45 H 0.96992 * 120.55794 * 223.64388 * 20 19 18 46 46 H 1.07994 * 119.07147 * 166.68990 * 21 20 19 47 47 H 1.08994 * 109.47167 * 222.14125 * 23 22 21 48 48 H 0.96698 * 113.99701 * 179.97438 * 24 23 22 49 49 H 1.48496 * 109.99909 * 60.00107 * 25 23 22 50 50 H 1.48505 * 109.99804 * 181.31784 * 25 23 22 51 51 H 1.09002 * 113.61322 * 89.11628 * 26 12 11 52 52 H 1.09001 * 113.61510 * 220.01767 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6844 1.1855 6 6 1.6523 -1.9723 1.3384 7 8 0.9516 -2.5097 0.5035 8 7 2.0681 -2.6657 2.4166 9 6 1.6740 -4.0668 2.5832 10 1 1.5099 -4.5760 1.6335 11 6 2.5746 -4.8488 3.5539 12 6 1.6267 -4.3935 4.6760 13 1 1.4244 -5.1665 5.4172 14 7 2.0033 -3.1123 5.2785 15 6 1.5299 -2.7743 6.4942 16 8 0.7959 -3.5328 7.0916 17 6 1.9124 -1.4536 7.1113 18 6 0.7245 -0.9013 7.9026 19 6 1.2036 0.3019 8.7274 20 7 2.2441 -0.1757 9.6500 21 6 3.2162 -1.0459 9.1726 22 6 3.0948 -1.6516 8.0161 23 6 4.1901 -2.5881 7.5752 24 8 3.7752 -3.9392 7.7862 25 14 5.7319 -2.2501 8.5650 26 6 0.5368 -4.2705 3.5981 27 1 -0.3633 0.5138 0.8900 28 1 -0.3632 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1301 1.4425 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9563 0.8900 33 1 1.6767 -1.7489 -1.2493 34 1 1.6767 -0.2075 -2.1392 35 1 3.1301 -0.7208 -1.2494 36 1 2.6277 -2.2368 3.0828 37 1 3.5815 -4.4405 3.6404 38 1 2.5675 -5.9259 3.3867 39 1 2.5903 -2.5056 4.8007 40 1 2.1786 -0.7504 6.3223 41 1 -0.0586 -0.5844 7.2138 42 1 0.3388 -1.6721 8.5697 43 1 1.6175 1.0625 8.0653 44 1 0.3701 0.7174 9.2935 45 1 2.2518 0.1122 10.5762 46 1 4.0964 -1.2287 9.7711 47 1 4.3968 -2.4326 6.5164 48 1 4.4326 -4.5980 7.5237 49 1 5.4633 -2.4587 10.0105 50 1 6.8290 -3.1457 8.1179 51 1 -0.0284 -5.1893 3.4419 52 1 -0.1014 -3.3953 3.7203 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_15608500.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:28:07 Heat of formation + Delta-G solvation = -87.427399 kcal Electronic energy + Delta-G solvation = -34038.682209 eV Core-core repulsion = 29620.558101 eV Total energy + Delta-G solvation = -4418.124109 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.203 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.05661 -41.35506 -40.36596 -38.78629 -37.72541 -37.55834 -35.29007 -34.50804 -33.79105 -32.99926 -32.84651 -28.33886 -28.29455 -27.47844 -26.88038 -26.35399 -25.35912 -23.44873 -23.08994 -21.75542 -21.15504 -20.64036 -19.21793 -19.08319 -18.75322 -18.34698 -17.86920 -17.52623 -17.11477 -16.99699 -16.67236 -16.23769 -16.15739 -15.54521 -15.45536 -15.29080 -15.02383 -14.99993 -14.66547 -14.48853 -14.33688 -14.12419 -13.85138 -13.76371 -13.43512 -13.42849 -13.23316 -13.11134 -13.05541 -12.91272 -12.85445 -12.83564 -12.44404 -12.35410 -12.24438 -11.86506 -11.78168 -11.64699 -11.55999 -11.33974 -11.30252 -10.97977 -10.51680 -10.27850 -10.21991 -9.90374 -8.49204 -4.96241 1.10267 1.23783 1.32318 1.57380 1.85654 1.94208 1.98519 2.20947 2.53912 3.07067 3.31274 3.44760 3.51457 3.69357 3.76699 3.78864 3.82553 3.89973 3.96116 3.98545 4.01728 4.13955 4.23052 4.37371 4.44864 4.49634 4.50754 4.54323 4.55799 4.61643 4.62200 4.69313 4.70989 4.74051 4.77312 4.82411 4.88901 4.92445 4.96234 5.00162 5.07802 5.17819 5.27656 5.30725 5.36110 5.43701 5.45621 5.57686 5.66356 6.27607 6.34646 6.58156 6.59197 6.78545 7.39555 7.47548 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C 0.138 3.862 3 C -0.142 4.142 4 C -0.185 4.185 5 O -0.365 6.365 6 C 0.653 3.347 7 O -0.561 6.561 8 N -0.694 5.694 9 C 0.136 3.864 10 H 0.109 0.891 11 C -0.150 4.150 12 C 0.124 3.876 13 H 0.106 0.894 14 N -0.715 5.715 15 C 0.541 3.459 16 O -0.525 6.525 17 C -0.038 4.038 18 C -0.127 4.127 19 C 0.121 3.879 20 N -0.747 5.747 21 C 0.156 3.844 22 C -0.231 4.231 23 C -0.052 4.052 24 O -0.529 6.529 25 Si 0.670 3.330 26 C -0.165 4.165 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.398 0.602 37 H 0.080 0.920 38 H 0.115 0.885 39 H 0.389 0.611 40 H 0.085 0.915 41 H 0.077 0.923 42 H 0.085 0.915 43 H 0.064 0.936 44 H 0.083 0.917 45 H 0.404 0.596 46 H 0.135 0.865 47 H 0.060 0.940 48 H 0.370 0.630 49 H -0.259 1.259 50 H -0.265 1.265 51 H 0.104 0.896 52 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.020 5.374 -0.660 6.744 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.101 3.899 3 C -0.199 4.199 4 C -0.242 4.242 5 O -0.280 6.280 6 C 0.406 3.594 7 O -0.449 6.449 8 N -0.354 5.354 9 C 0.031 3.969 10 H 0.127 0.873 11 C -0.188 4.188 12 C 0.018 3.982 13 H 0.124 0.876 14 N -0.368 5.368 15 C 0.328 3.672 16 O -0.399 6.399 17 C -0.059 4.059 18 C -0.166 4.166 19 C -0.003 4.003 20 N -0.377 5.377 21 C 0.034 3.966 22 C -0.242 4.242 23 C -0.163 4.163 24 O -0.335 6.335 25 Si 0.573 3.427 26 C -0.205 4.205 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.234 0.766 37 H 0.099 0.901 38 H 0.133 0.867 39 H 0.224 0.776 40 H 0.103 0.897 41 H 0.095 0.905 42 H 0.104 0.896 43 H 0.082 0.918 44 H 0.101 0.899 45 H 0.239 0.761 46 H 0.152 0.848 47 H 0.078 0.922 48 H 0.216 0.784 49 H -0.185 1.185 50 H -0.190 1.190 51 H 0.122 0.878 52 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 3.092 4.664 -0.029 5.596 hybrid contribution 0.472 -0.630 -0.032 0.789 sum 3.564 4.034 -0.062 5.383 Atomic orbital electron populations 1.22526 0.93847 1.05085 1.02725 1.22117 0.94431 0.91532 0.81794 1.21882 1.02339 0.92321 1.03362 1.22530 1.01613 1.03477 0.96564 1.86294 1.71526 1.23340 1.46825 1.18055 0.78681 0.80658 0.81964 1.90931 1.40593 1.70331 1.43090 1.44461 1.55426 1.11964 1.23553 1.21919 0.95744 0.79381 0.99842 0.87301 1.23708 0.98677 1.01985 0.94462 1.21862 0.94943 0.86870 0.94527 0.87638 1.45781 1.51759 1.19997 1.19299 1.20275 0.79007 0.88055 0.79866 1.90685 1.36017 1.52146 1.61031 1.19681 0.94704 0.94205 0.97321 1.21810 0.96281 0.98773 0.99707 1.21619 0.90643 0.95435 0.92638 1.44556 1.29074 1.51241 1.12815 1.20536 0.91864 0.90211 0.94025 1.19375 0.98816 1.06049 0.99933 1.24493 1.04129 0.83660 1.03997 1.86753 1.44560 1.14617 1.87528 0.95421 0.76093 0.91591 0.79569 1.23955 0.97320 1.03740 0.95464 0.92113 0.90916 0.89420 0.91359 0.89926 0.91376 0.89417 0.90918 0.92089 0.76592 0.90103 0.86705 0.77582 0.89652 0.90481 0.89621 0.91752 0.89884 0.76150 0.84805 0.92165 0.78365 1.18462 1.19016 0.87807 0.90510 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.20 8.37 37.16 0.31 0.11 16 2 C 0.14 0.11 1.13 -90.62 -0.10 0.01 16 3 C -0.14 0.18 8.85 37.16 0.33 0.51 16 4 C -0.18 -0.17 8.37 37.16 0.31 0.14 16 5 O -0.37 -0.61 9.94 -40.33 -0.40 -1.01 16 6 C 0.65 1.49 8.06 54.05 0.44 1.92 16 7 O -0.56 -2.69 11.55 -19.29 -0.22 -2.92 16 8 N -0.69 0.42 5.09 -57.93 -0.29 0.12 16 9 C 0.14 -0.13 4.25 -67.12 -0.29 -0.41 16 10 H 0.11 0.02 7.59 -51.93 -0.39 -0.38 16 11 C -0.15 0.42 7.54 -25.92 -0.20 0.22 16 12 C 0.12 -0.06 4.25 -67.12 -0.28 -0.34 16 13 H 0.11 0.17 7.60 -51.93 -0.39 -0.22 16 14 N -0.72 0.38 5.08 -53.02 -0.27 0.11 16 15 C 0.54 1.37 4.95 -10.98 -0.05 1.32 16 16 O -0.52 -3.74 15.75 5.55 0.09 -3.65 16 17 C -0.04 -0.02 2.69 -93.14 -0.25 -0.27 16 18 C -0.13 -0.06 5.31 -26.43 -0.14 -0.20 16 19 C 0.12 -0.22 7.16 -3.47 -0.02 -0.24 16 20 N -0.75 0.93 5.83 -60.68 -0.35 0.58 16 21 C 0.16 -0.01 9.61 -16.08 -0.15 -0.16 16 22 C -0.23 -0.12 5.05 -101.34 -0.51 -0.63 16 23 C -0.05 0.02 2.21 36.01 0.08 0.10 16 24 O -0.53 -0.97 11.66 -35.23 -0.41 -1.39 16 25 Si 0.67 -0.77 30.22 -169.99 -5.14 -5.91 16 26 C -0.16 0.02 7.68 -25.92 -0.20 -0.18 16 27 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 28 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 29 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 30 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 32 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 33 H 0.09 0.27 5.88 -51.93 -0.31 -0.03 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 35 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 36 H 0.40 -1.04 6.45 -40.82 -0.26 -1.31 16 37 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 38 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 39 H 0.39 -1.09 6.31 -40.82 -0.26 -1.35 16 40 H 0.09 -0.16 8.10 -51.93 -0.42 -0.58 16 41 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 42 H 0.09 0.30 7.50 -51.93 -0.39 -0.09 16 43 H 0.06 -0.17 8.14 -51.93 -0.42 -0.60 16 44 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 45 H 0.40 -1.20 8.96 -40.82 -0.37 -1.57 16 46 H 0.14 -0.12 4.43 -52.49 -0.23 -0.35 16 47 H 0.06 -0.14 7.96 -51.93 -0.41 -0.55 16 48 H 0.37 -0.56 8.74 45.56 0.40 -0.16 16 49 H -0.26 -0.49 6.64 56.52 0.38 -0.11 16 50 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 51 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 52 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 LS Contribution 403.74 15.07 6.08 6.08 Total: 0.00 -9.98 403.74 -10.14 -20.12 By element: Atomic # 1 Polarization: -5.56 SS G_CDS: -8.49 Total: -14.05 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: -0.74 Total: 1.89 kcal Atomic # 7 Polarization: 1.74 SS G_CDS: -0.92 Total: 0.82 kcal Atomic # 8 Polarization: -8.01 SS G_CDS: -0.95 Total: -8.96 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.14 Total: -5.91 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -9.98 -10.14 -20.12 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_15608500.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.306 kcal (2) G-P(sol) polarization free energy of solvation -9.980 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.286 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.141 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.121 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.427 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds