Wall clock time and date at job start Sun Mar 7 2021 00:29:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.37647 * 125.67605 * 2 1 4 4 C 1.46667 * 126.22475 * 0.02562 * 3 2 1 5 5 O 1.21690 * 120.00375 * 5.73355 * 4 3 2 6 6 N 1.34783 * 119.99645 * 185.72961 * 4 3 2 7 7 C 1.46503 * 119.99671 * 185.11587 * 6 4 3 8 8 H 1.09003 * 112.85148 * 42.47214 * 7 6 4 9 9 C 1.53777 * 113.61258 * 173.77816 * 7 6 4 10 10 C 1.53780 * 87.08092 * 89.11708 * 9 7 6 11 11 H 1.09007 * 113.61869 * 139.98093 * 10 9 7 12 12 N 1.46499 * 113.61514 * 270.88177 * 10 9 7 13 13 C 1.34775 * 120.00389 * 257.14534 * 12 10 9 14 14 O 1.21511 * 119.99762 * 359.97438 * 13 12 10 15 15 O 1.34636 * 120.00302 * 180.02562 * 13 12 10 16 16 C 1.45199 * 117.00097 * 179.97438 * 15 13 12 17 17 C 1.52999 * 109.46937 * 60.00154 * 16 15 13 18 18 C 1.53001 * 109.47128 * 179.97438 * 16 15 13 19 19 C 1.52996 * 109.47571 * 300.00299 * 16 15 13 20 20 C 1.53775 * 87.08253 * 25.43344 * 10 9 7 21 21 C 1.37885 * 107.54886 * 180.16566 * 3 2 1 22 22 C 1.39884 * 107.09109 * 359.57856 * 21 3 2 23 23 Br 1.89098 * 126.07244 * 180.28310 * 22 21 3 24 24 C 1.35501 * 107.85078 * 0.26671 * 22 21 3 25 25 C 1.50708 * 125.56811 * 179.97438 * 24 22 21 26 26 O 1.42903 * 109.46725 * 210.01910 * 25 24 22 27 27 Si 1.86295 * 109.47161 * 330.02314 * 25 24 22 28 28 H 1.09004 * 109.47157 * 264.15107 * 1 2 3 29 29 H 1.09008 * 109.47246 * 24.14962 * 1 2 3 30 30 H 1.09003 * 109.47649 * 144.14667 * 1 2 3 31 31 H 0.96988 * 120.00448 * 5.11536 * 6 4 3 32 32 H 1.08999 * 113.61568 * 203.66267 * 9 7 6 33 33 H 1.08998 * 113.61605 * 334.56686 * 9 7 6 34 34 H 0.97004 * 120.00049 * 77.13816 * 12 10 9 35 35 H 1.09005 * 109.47377 * 59.99876 * 17 16 15 36 36 H 1.08997 * 109.47719 * 179.97438 * 17 16 15 37 37 H 1.09000 * 109.47535 * 300.00234 * 17 16 15 38 38 H 1.08998 * 109.47262 * 60.00305 * 18 16 15 39 39 H 1.09003 * 109.47147 * 180.02562 * 18 16 15 40 40 H 1.09005 * 109.47126 * 300.00087 * 18 16 15 41 41 H 1.08996 * 109.47113 * 59.99404 * 19 16 15 42 42 H 1.08996 * 109.47529 * 179.97438 * 19 16 15 43 43 H 1.09006 * 109.46773 * 299.99983 * 19 16 15 44 44 H 1.09003 * 113.61837 * 220.02488 * 20 10 9 45 45 H 1.08994 * 113.69287 * 89.12658 * 20 10 9 46 46 H 1.07993 * 126.45669 * 179.84209 * 21 3 2 47 47 H 1.09004 * 109.46815 * 90.02355 * 25 24 22 48 48 H 0.96696 * 113.99771 * 60.00955 * 26 25 24 49 49 H 1.48499 * 109.99841 * 179.97438 * 27 25 24 50 50 H 1.48503 * 110.00098 * 301.31599 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5122 0.0005 5 8 0.6264 2.7649 0.1063 6 7 2.7067 3.5136 -0.1161 7 6 2.2661 4.9062 -0.0032 8 1 1.5515 5.0600 0.8054 9 6 3.4221 5.9203 -0.0073 10 6 3.2894 5.9466 -1.5392 11 1 3.4017 6.9415 -1.9702 12 7 4.1060 4.9363 -2.2164 13 6 5.2569 5.2938 -2.8199 14 8 5.6170 6.4542 -2.8026 15 8 6.0071 4.3654 -3.4427 16 6 7.2335 4.8223 -4.0714 17 6 8.1464 5.4469 -3.0144 18 6 7.9459 3.6350 -4.7224 19 6 6.9011 5.8662 -5.1394 20 6 1.8245 5.5230 -1.3410 21 6 3.5781 0.6892 -0.0038 22 6 3.5528 -0.7094 0.0037 23 35 5.0609 -1.8503 0.0103 24 6 2.2558 -1.1014 0.0058 25 6 1.7713 -2.5285 0.0130 26 8 0.5134 -2.6078 -0.6606 27 14 3.0122 -3.6100 -0.8594 28 1 -0.3634 -0.1047 1.0223 29 1 -0.3634 0.9378 -0.4205 30 1 -0.3634 -0.8329 -0.6019 31 1 3.6421 3.3123 -0.2747 32 1 3.1728 6.8686 0.4688 33 1 4.3678 5.5058 0.3420 34 1 3.8184 4.0100 -2.2305 35 1 8.3834 4.7032 -2.2535 36 1 9.0674 5.7896 -3.4862 37 1 7.6392 6.2927 -2.5502 38 1 7.2958 3.1895 -5.4754 39 1 8.8669 3.9779 -5.1940 40 1 8.1829 2.8916 -3.9612 41 1 6.3938 6.7119 -4.6752 42 1 7.8218 6.2095 -5.6110 43 1 6.2507 5.4211 -5.8924 44 1 1.4803 4.7876 -2.0682 45 1 1.1373 6.3616 -1.2294 46 1 4.4582 1.3150 -0.0072 47 1 1.6542 -2.8673 1.0424 48 1 0.5428 -2.3211 -1.5836 49 1 2.5464 -5.0200 -0.8586 50 1 3.2045 -3.1389 -2.2545 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941094_5000100.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:29:17 Heat of formation + Delta-G solvation = -62.507457 kcal Electronic energy + Delta-G solvation = -35003.814441 eV Core-core repulsion = 30274.264417 eV Total energy + Delta-G solvation = -4729.550023 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 430.098 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.96363 -42.05874 -41.11202 -39.51242 -38.06335 -37.86427 -35.45598 -35.04470 -34.45940 -33.66581 -32.23773 -31.15928 -28.35942 -28.28951 -27.58783 -27.28864 -26.83253 -25.69614 -23.88964 -22.95176 -21.65681 -21.34680 -20.78829 -20.46449 -19.30252 -18.96777 -18.32379 -17.65159 -17.37634 -17.21177 -17.16317 -16.57584 -16.45944 -16.24846 -15.90428 -15.64945 -15.51360 -15.37074 -15.25169 -15.12905 -14.64854 -14.57069 -14.45257 -14.09257 -13.82493 -13.74333 -13.45973 -13.34417 -13.24415 -13.11629 -12.97054 -12.89091 -12.85774 -12.81361 -12.54193 -12.46413 -12.30258 -12.09110 -12.05519 -11.67610 -11.49729 -11.38977 -11.22488 -11.12494 -10.85311 -10.39614 -10.16330 -9.90227 -9.37334 -4.69560 0.11354 0.33745 0.87531 1.08079 1.18263 1.42832 1.54909 1.71004 1.91379 2.08153 2.20903 3.02408 3.07033 3.26181 3.30921 3.43669 3.56862 3.71992 3.74872 3.77753 3.81102 3.95277 4.06121 4.09415 4.26569 4.32888 4.38256 4.48161 4.54801 4.60919 4.62445 4.64883 4.68945 4.73570 4.77519 4.77785 4.82537 4.88325 4.89001 4.94133 4.96527 5.10185 5.18370 5.23275 5.28118 5.34009 5.49259 5.54990 5.59286 5.75366 6.20034 6.27368 6.32603 6.96513 7.29384 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.387 5.387 3 C -0.057 4.057 4 C 0.595 3.405 5 O -0.566 6.566 6 N -0.692 5.692 7 C 0.121 3.879 8 H 0.098 0.902 9 C -0.140 4.140 10 C 0.130 3.870 11 H 0.101 0.899 12 N -0.687 5.687 13 C 0.647 3.353 14 O -0.587 6.587 15 O -0.368 6.368 16 C 0.130 3.870 17 C -0.180 4.180 18 C -0.139 4.139 19 C -0.182 4.182 20 C -0.146 4.146 21 C -0.093 4.093 22 C -0.189 4.189 23 Br 0.090 6.910 24 C 0.058 3.942 25 C -0.039 4.039 26 O -0.540 6.540 27 Si 0.627 3.373 28 H 0.080 0.920 29 H 0.096 0.904 30 H 0.115 0.885 31 H 0.412 0.588 32 H 0.130 0.870 33 H 0.082 0.918 34 H 0.409 0.591 35 H 0.066 0.934 36 H 0.084 0.916 37 H 0.065 0.935 38 H 0.066 0.934 39 H 0.097 0.903 40 H 0.073 0.927 41 H 0.065 0.935 42 H 0.086 0.914 43 H 0.059 0.941 44 H 0.069 0.931 45 H 0.126 0.874 46 H 0.183 0.817 47 H 0.140 0.860 48 H 0.387 0.613 49 H -0.269 1.269 50 H -0.278 1.278 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.702 0.414 0.792 3.809 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.059 5.059 3 C -0.171 4.171 4 C 0.384 3.616 5 O -0.446 6.446 6 N -0.345 5.345 7 C 0.016 3.984 8 H 0.116 0.884 9 C -0.179 4.179 10 C 0.026 3.974 11 H 0.119 0.881 12 N -0.347 5.347 13 C 0.401 3.599 14 O -0.477 6.477 15 O -0.282 6.282 16 C 0.093 3.907 17 C -0.237 4.237 18 C -0.196 4.196 19 C -0.239 4.239 20 C -0.185 4.185 21 C -0.119 4.119 22 C -0.274 4.274 23 Br 0.173 6.827 24 C -0.065 4.065 25 C -0.150 4.150 26 O -0.348 6.348 27 Si 0.529 3.471 28 H 0.098 0.902 29 H 0.114 0.886 30 H 0.133 0.867 31 H 0.250 0.750 32 H 0.148 0.852 33 H 0.101 0.899 34 H 0.246 0.754 35 H 0.085 0.915 36 H 0.103 0.897 37 H 0.084 0.916 38 H 0.085 0.915 39 H 0.115 0.885 40 H 0.092 0.908 41 H 0.083 0.917 42 H 0.105 0.895 43 H 0.078 0.922 44 H 0.087 0.913 45 H 0.144 0.856 46 H 0.200 0.800 47 H 0.157 0.843 48 H 0.237 0.763 49 H -0.195 1.195 50 H -0.203 1.203 Dipole moment (debyes) X Y Z Total from point charges 3.212 0.041 0.740 3.297 hybrid contribution -1.152 0.173 -0.868 1.453 sum 2.060 0.214 -0.128 2.075 Atomic orbital electron populations 1.22686 0.74272 1.06380 1.05094 1.43914 1.07705 1.03756 1.50558 1.20154 0.90306 0.87816 1.18862 1.16906 0.85351 0.83543 0.75849 1.90820 1.17283 1.84953 1.51539 1.45386 1.11471 1.04878 1.72723 1.22017 0.98152 0.79459 0.98732 0.88394 1.23776 0.98331 1.00437 0.95365 1.21995 0.90340 0.92012 0.93062 0.88143 1.44504 1.20513 1.12960 1.56739 1.18279 0.81178 0.83147 0.77279 1.90920 1.72602 1.19359 1.64851 1.86315 1.35948 1.39652 1.66306 1.22328 0.80046 0.96046 0.92237 1.22475 1.00129 1.01987 0.99117 1.21902 1.00485 0.96122 1.01098 1.22493 1.03594 0.99507 0.98346 1.23778 0.95207 1.02254 0.97269 1.21465 0.95558 0.92622 1.02301 1.20676 0.90639 0.94918 1.21201 1.96322 1.32752 1.56257 1.97353 1.20983 0.89620 0.90254 1.05647 1.24703 0.93192 0.92638 1.04444 1.86550 1.29783 1.88723 1.29695 0.92701 0.92421 0.77969 0.84040 0.90186 0.88590 0.86739 0.75039 0.85228 0.89909 0.75358 0.91508 0.89686 0.91594 0.91465 0.88453 0.90793 0.91655 0.89544 0.92213 0.91254 0.85599 0.80002 0.84268 0.76309 1.19502 1.20286 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.02 10.20 127.77 1.30 1.33 16 2 N -0.39 -0.62 3.16 -519.60 -1.64 -2.27 16 3 C -0.06 -0.04 6.88 40.35 0.28 0.23 16 4 C 0.60 0.91 7.77 86.44 0.67 1.58 16 5 O -0.57 -4.48 14.55 -4.32 -0.06 -4.54 16 6 N -0.69 3.08 4.42 -444.00 -1.96 1.12 16 7 C 0.12 -0.60 4.02 45.52 0.18 -0.41 16 8 H 0.10 -0.30 8.02 -2.39 -0.02 -0.32 16 9 C -0.14 0.97 7.57 31.12 0.24 1.21 16 10 C 0.13 -0.49 4.26 45.52 0.19 -0.29 16 11 H 0.10 -0.10 7.58 -2.38 -0.02 -0.12 16 12 N -0.69 1.35 4.90 -567.62 -2.78 -1.43 16 13 C 0.65 2.50 8.06 129.79 1.05 3.55 16 14 O -0.59 -5.30 11.54 19.80 0.23 -5.07 16 15 O -0.37 -1.07 9.94 -55.45 -0.55 -1.62 16 16 C 0.13 0.13 1.13 -10.79 -0.01 0.11 16 17 C -0.18 -0.14 8.37 71.98 0.60 0.46 16 18 C -0.14 0.49 8.85 71.98 0.64 1.13 16 19 C -0.18 -0.38 8.37 71.98 0.60 0.23 16 20 C -0.15 0.72 7.61 31.12 0.24 0.96 16 21 C -0.09 0.25 10.33 22.58 0.23 0.48 16 22 C -0.19 0.16 6.15 22.04 0.14 0.29 16 23 Br 0.09 -0.28 28.25 -20.37 -0.58 -0.85 16 24 C 0.06 0.04 6.15 41.35 0.25 0.29 16 25 C -0.04 0.00 2.99 71.24 0.21 0.22 16 26 O -0.54 -0.21 10.12 -148.98 -1.51 -1.72 16 27 Si 0.63 1.16 27.10 68.60 1.86 3.02 16 28 H 0.08 0.05 8.14 -2.38 -0.02 0.03 16 29 H 0.10 0.27 6.12 -2.38 -0.01 0.25 16 30 H 0.11 -0.25 5.27 -2.39 -0.01 -0.26 16 31 H 0.41 -3.35 6.61 -92.72 -0.61 -3.97 16 32 H 0.13 -1.24 8.14 -2.39 -0.02 -1.26 16 33 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 34 H 0.41 -1.87 7.30 -92.71 -0.68 -2.54 16 35 H 0.07 -0.04 8.14 -2.38 -0.02 -0.05 16 36 H 0.08 -0.17 8.14 -2.39 -0.02 -0.19 16 37 H 0.07 0.38 5.88 -2.39 -0.01 0.37 16 38 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 39 H 0.10 -0.63 8.14 -2.39 -0.02 -0.64 16 40 H 0.07 -0.32 8.14 -2.38 -0.02 -0.34 16 41 H 0.06 0.46 5.88 -2.39 -0.01 0.45 16 42 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 43 H 0.06 0.11 8.14 -2.38 -0.02 0.09 16 44 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 45 H 0.13 -0.93 8.14 -2.39 -0.02 -0.95 16 46 H 0.18 -1.59 7.49 -2.91 -0.02 -1.61 16 47 H 0.14 -0.28 7.96 -2.38 -0.02 -0.30 16 48 H 0.39 -1.63 8.31 -74.06 -0.62 -2.24 16 49 H -0.27 -2.18 7.11 99.48 0.71 -1.47 16 50 H -0.28 -1.85 7.11 99.48 0.71 -1.15 16 Total: 0.00 -18.26 411.03 -1.04 -19.30 By element: Atomic # 1 Polarization: -16.43 SS G_CDS: -0.86 Total: -17.29 kcal Atomic # 6 Polarization: 4.55 SS G_CDS: 6.81 Total: 11.36 kcal Atomic # 7 Polarization: 3.80 SS G_CDS: -6.38 Total: -2.58 kcal Atomic # 8 Polarization: -11.06 SS G_CDS: -1.89 Total: -12.96 kcal Atomic # 14 Polarization: 1.16 SS G_CDS: 1.86 Total: 3.02 kcal Atomic # 35 Polarization: -0.28 SS G_CDS: -0.58 Total: -0.85 kcal Total: -18.26 -1.04 -19.30 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_5000100.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.207 kcal (2) G-P(sol) polarization free energy of solvation -18.264 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.472 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.036 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.300 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.507 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds