Wall clock time and date at job start Sun Mar 7 2021 00:29:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53008 * 109.47302 * 2 1 4 4 C 1.53002 * 109.47381 * 239.99771 * 2 1 3 5 5 O 1.45198 * 109.47420 * 119.99688 * 2 1 3 6 6 C 1.34640 * 116.99777 * 59.99790 * 5 2 1 7 7 O 1.21509 * 119.99855 * 0.02562 * 6 5 2 8 8 N 1.34778 * 119.99921 * 179.97438 * 6 5 2 9 9 C 1.46506 * 119.99777 * 179.97438 * 8 6 5 10 10 H 1.08999 * 112.90445 * 336.25686 * 9 8 6 11 11 C 1.53777 * 113.61323 * 107.50602 * 9 8 6 12 12 C 1.53780 * 87.08196 * 139.97769 * 11 9 8 13 13 H 1.08996 * 113.68561 * 89.12880 * 12 11 9 14 14 N 1.46496 * 113.61477 * 220.01580 * 12 11 9 15 15 C 1.34780 * 120.00370 * 252.49754 * 14 12 11 16 16 O 1.21279 * 119.99731 * 0.02562 * 15 14 12 17 17 C 1.50690 * 119.99950 * 180.02562 * 15 14 12 18 18 O 1.42900 * 109.46915 * 180.02562 * 17 15 14 19 19 C 1.35926 * 117.00069 * 180.02562 * 18 17 15 20 20 C 1.38795 * 120.05906 * 180.25142 * 19 18 17 21 21 Br 1.89096 * 120.03497 * 0.02562 * 20 19 18 22 22 C 1.38233 * 119.92727 * 180.29371 * 20 19 18 23 23 C 1.38249 * 120.04380 * 359.73068 * 22 20 19 24 24 C 1.50707 * 119.93923 * 180.02562 * 23 22 20 25 25 O 1.42898 * 109.47163 * 244.97505 * 24 23 22 26 26 Si 1.86299 * 109.47085 * 4.97881 * 24 23 22 27 27 C 1.38283 * 120.11993 * 359.97438 * 23 22 20 28 28 C 1.38148 * 120.06928 * 359.97438 * 27 23 22 29 29 C 1.53780 * 87.08207 * 334.56995 * 12 11 9 30 30 H 1.09001 * 109.46972 * 300.00140 * 1 2 3 31 31 H 1.09003 * 109.47054 * 60.00059 * 1 2 3 32 32 H 1.08990 * 109.47080 * 180.02562 * 1 2 3 33 33 H 1.08999 * 109.47235 * 180.02562 * 3 2 1 34 34 H 1.08999 * 109.46596 * 299.99735 * 3 2 1 35 35 H 1.08997 * 109.47133 * 59.99492 * 3 2 1 36 36 H 1.08993 * 109.47107 * 300.00539 * 4 2 1 37 37 H 1.09003 * 109.46888 * 60.00068 * 4 2 1 38 38 H 1.08992 * 109.47486 * 180.02562 * 4 2 1 39 39 H 0.96993 * 120.00313 * 0.02562 * 8 6 5 40 40 H 1.09005 * 113.61486 * 25.43018 * 11 9 8 41 41 H 1.08996 * 113.61592 * 254.53533 * 11 9 8 42 42 H 0.97005 * 119.99805 * 72.50257 * 14 12 11 43 43 H 1.09001 * 109.47555 * 60.00596 * 17 15 14 44 44 H 1.09003 * 109.47779 * 300.00430 * 17 15 14 45 45 H 1.07997 * 119.98178 * 179.74797 * 22 20 19 46 46 H 1.08996 * 109.46532 * 124.97717 * 24 23 22 47 47 H 0.96702 * 113.99690 * 60.00425 * 25 24 23 48 48 H 1.48496 * 109.99860 * 179.97438 * 26 24 23 49 49 H 1.48495 * 110.00203 * 301.31968 * 26 24 23 50 50 H 1.08001 * 119.96370 * 179.97438 * 27 23 22 51 51 H 1.08002 * 120.01866 * 180.02562 * 28 27 23 52 52 H 1.08996 * 113.61524 * 139.98198 * 29 12 11 53 53 H 1.09006 * 113.60994 * 270.88490 * 29 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9722 1.3384 7 8 0.9516 -2.5096 0.5037 8 7 2.0681 -2.6656 2.4167 9 6 1.6740 -4.0668 2.5833 10 1 0.7597 -4.3171 2.0451 11 6 2.8216 -5.0621 2.3444 12 6 2.2736 -5.8598 3.5394 13 1 1.5233 -6.6010 3.2641 14 7 3.3183 -6.4043 4.4102 15 6 3.5767 -7.7271 4.4070 16 8 2.9446 -8.4666 3.6828 17 6 4.6509 -8.2871 5.3031 18 8 4.7346 -9.7018 5.1196 19 6 5.6610 -10.3664 5.8597 20 6 5.8002 -11.7410 5.7280 21 35 4.7014 -12.6920 4.5179 22 6 6.7390 -12.4150 6.4864 23 6 7.5424 -11.7199 7.3711 24 6 8.5656 -12.4570 8.1963 25 8 8.2196 -12.3625 9.5796 26 14 8.6015 -14.2483 7.6860 27 6 7.4096 -10.3495 7.4994 28 6 6.4736 -9.6710 6.7430 29 6 1.6755 -4.5373 4.0474 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0276 0.0005 33 1 3.1300 1.4425 -0.0005 34 1 1.6767 1.9563 -0.8900 35 1 1.6767 1.9564 0.8899 36 1 1.6767 -1.7489 -1.2492 37 1 1.6767 -0.2075 -2.1392 38 1 3.1300 -0.7217 -1.2490 39 1 2.6277 -2.2368 3.0828 40 1 3.8106 -4.6382 2.5190 41 1 2.7490 -5.5925 1.3950 42 1 3.8240 -5.8128 4.9892 43 1 4.4069 -8.0692 6.3429 44 1 5.6084 -7.8312 5.0514 45 1 6.8453 -13.4852 6.3875 46 1 9.5486 -12.0139 8.0366 47 1 7.3550 -12.7381 9.7952 48 1 9.6071 -14.9860 8.4920 49 1 7.2588 -14.8556 7.8688 50 1 8.0382 -9.8090 8.1916 51 1 6.3708 -8.6006 6.8436 52 1 0.6777 -4.6441 4.4728 53 1 2.3512 -3.9699 4.6875 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13941094_6201210.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:29:25 Heat of formation + Delta-G solvation = -120.101421 kcal Electronic energy + Delta-G solvation = -35787.417054 eV Core-core repulsion = 30673.887148 eV Total energy + Delta-G solvation = -5113.529906 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 457.102 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -41.97581 -41.67028 -41.00582 -39.85886 -39.01154 -37.92822 -37.32146 -35.61447 -34.93641 -33.60211 -33.39951 -32.12899 -30.49744 -29.56007 -28.38822 -28.31395 -26.80745 -26.49153 -25.73455 -24.07458 -23.13041 -22.39429 -21.74931 -21.42979 -20.80158 -19.55889 -19.22302 -18.53466 -18.18440 -17.99716 -17.50163 -17.32874 -17.19386 -16.99295 -16.43232 -16.24427 -16.22882 -15.87792 -15.63003 -15.59349 -15.48807 -15.33487 -14.84057 -14.78649 -14.41653 -14.29575 -14.12029 -13.98884 -13.76251 -13.51970 -13.37944 -13.37492 -13.15938 -12.94200 -12.88122 -12.61195 -12.49933 -12.46413 -12.37200 -12.33083 -12.22271 -12.16886 -12.00999 -11.86003 -11.72880 -11.41201 -11.19824 -11.13048 -10.98612 -10.62901 -10.28708 -10.07225 -9.99220 -9.31554 -4.95125 -0.02108 0.09130 0.64864 1.10224 1.28503 1.44188 1.45983 1.56053 1.71924 1.92223 2.40231 2.51932 3.14441 3.31591 3.42064 3.46202 3.51791 3.54646 3.72723 3.76552 3.79021 3.79665 3.84866 3.87342 3.92935 4.04695 4.09482 4.09750 4.35089 4.41927 4.50259 4.56110 4.59406 4.60712 4.65140 4.68474 4.72992 4.74860 4.80401 4.82758 4.84821 4.86464 4.94573 4.99380 5.04771 5.11764 5.25301 5.25630 5.31206 5.34369 5.46406 5.50895 5.58295 6.06907 6.38336 6.46832 6.47690 7.15064 7.33225 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.129 3.871 3 C -0.138 4.138 4 C -0.181 4.181 5 O -0.368 6.368 6 C 0.642 3.358 7 O -0.596 6.596 8 N -0.684 5.684 9 C 0.138 3.862 10 H 0.103 0.897 11 C -0.162 4.162 12 C 0.126 3.874 13 H 0.098 0.902 14 N -0.695 5.695 15 C 0.512 3.488 16 O -0.568 6.568 17 C 0.033 3.967 18 O -0.305 6.305 19 C 0.150 3.850 20 C -0.141 4.141 21 Br -0.052 7.052 22 C -0.057 4.057 23 C -0.148 4.148 24 C -0.061 4.061 25 O -0.543 6.543 26 Si 0.734 3.266 27 C -0.032 4.032 28 C -0.194 4.194 29 C -0.127 4.127 30 H 0.063 0.937 31 H 0.085 0.915 32 H 0.062 0.938 33 H 0.070 0.930 34 H 0.097 0.903 35 H 0.071 0.929 36 H 0.062 0.938 37 H 0.085 0.915 38 H 0.062 0.938 39 H 0.420 0.580 40 H 0.108 0.892 41 H 0.057 0.943 42 H 0.424 0.576 43 H 0.131 0.869 44 H 0.131 0.869 45 H 0.144 0.856 46 H 0.138 0.862 47 H 0.386 0.614 48 H -0.296 1.296 49 H -0.287 1.287 50 H 0.158 0.842 51 H 0.175 0.825 52 H 0.094 0.906 53 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.164 8.693 4.979 11.270 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.092 3.908 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.282 6.282 6 C 0.395 3.605 7 O -0.487 6.487 8 N -0.344 5.344 9 C 0.033 3.967 10 H 0.121 0.879 11 C -0.202 4.202 12 C 0.020 3.980 13 H 0.116 0.884 14 N -0.349 5.349 15 C 0.299 3.701 16 O -0.446 6.446 17 C -0.045 4.045 18 O -0.218 6.218 19 C 0.102 3.898 20 C -0.221 4.221 21 Br 0.033 6.967 22 C -0.077 4.077 23 C -0.150 4.150 24 C -0.171 4.171 25 O -0.351 6.351 26 Si 0.641 3.359 27 C -0.050 4.050 28 C -0.213 4.213 29 C -0.166 4.166 30 H 0.082 0.918 31 H 0.104 0.896 32 H 0.081 0.919 33 H 0.089 0.911 34 H 0.115 0.885 35 H 0.090 0.910 36 H 0.081 0.919 37 H 0.104 0.896 38 H 0.081 0.919 39 H 0.258 0.742 40 H 0.126 0.874 41 H 0.076 0.924 42 H 0.263 0.737 43 H 0.149 0.851 44 H 0.149 0.851 45 H 0.161 0.839 46 H 0.155 0.845 47 H 0.236 0.764 48 H -0.224 1.224 49 H -0.214 1.214 50 H 0.175 0.825 51 H 0.192 0.808 52 H 0.112 0.888 53 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 4.267 7.016 3.677 8.998 hybrid contribution -0.413 0.407 1.218 1.349 sum 3.855 7.423 4.895 9.691 Atomic orbital electron populations 1.22480 0.94124 1.03657 1.03551 1.22328 0.94384 0.92590 0.81479 1.21892 1.02499 0.90808 1.04267 1.22478 1.01665 1.02199 0.97476 1.86307 1.71475 1.23261 1.47159 1.18464 0.78578 0.80742 0.82679 1.90919 1.42398 1.71075 1.44312 1.44604 1.54829 1.11871 1.23054 1.22257 0.98488 0.77394 0.98541 0.87932 1.24026 1.00208 0.96971 0.98981 1.22113 0.90551 0.94422 0.90888 0.88383 1.45527 1.38529 1.06705 1.44130 1.20557 0.83895 0.82990 0.82695 1.90800 1.51517 1.59616 1.42680 1.22858 1.00305 0.79518 1.01786 1.86249 1.53465 1.21336 1.60725 1.18811 0.89304 0.90282 0.91361 1.21137 1.03760 0.92580 1.04652 1.96775 1.66633 1.73867 1.59388 1.20953 0.92725 1.00127 0.93860 1.20217 0.99754 0.95334 0.99681 1.24886 0.99888 1.10085 0.82285 1.86582 1.41969 1.82900 1.23645 0.94294 0.78229 0.73691 0.89687 1.21239 0.95246 0.92938 0.95604 1.21622 0.98449 1.02307 0.98906 1.23709 1.04014 0.93844 0.94999 0.91770 0.89594 0.91872 0.91093 0.88465 0.91026 0.91937 0.89581 0.91881 0.74160 0.87392 0.92393 0.73699 0.85134 0.85100 0.83897 0.84456 0.76445 1.22404 1.21384 0.82456 0.80782 0.88765 0.85453 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.48 8.37 71.98 0.60 0.12 16 2 C 0.13 0.27 1.13 -10.79 -0.01 0.25 16 3 C -0.14 0.42 8.85 71.98 0.64 1.06 16 4 C -0.18 -0.54 8.37 71.98 0.60 0.07 16 5 O -0.37 -1.39 9.94 -55.49 -0.55 -1.94 16 6 C 0.64 3.22 8.06 129.79 1.05 4.26 16 7 O -0.60 -6.82 11.48 19.81 0.23 -6.59 16 8 N -0.68 1.98 5.36 -567.60 -3.04 -1.07 16 9 C 0.14 -0.50 4.24 45.52 0.19 -0.31 16 10 H 0.10 0.14 7.47 -2.39 -0.02 0.13 16 11 C -0.16 0.59 7.68 31.12 0.24 0.83 16 12 C 0.13 -0.62 4.24 45.52 0.19 -0.42 16 13 H 0.10 0.11 7.46 -2.39 -0.02 0.10 16 14 N -0.69 5.57 5.35 -440.06 -2.36 3.22 16 15 C 0.51 -0.06 7.91 87.65 0.69 0.63 16 16 O -0.57 -7.18 16.10 16.01 0.26 -6.92 16 17 C 0.03 -0.21 5.22 71.23 0.37 0.16 16 18 O -0.31 -1.09 9.01 -73.68 -0.66 -1.75 16 19 C 0.15 0.19 6.68 22.52 0.15 0.34 16 20 C -0.14 -0.58 6.24 22.40 0.14 -0.44 16 21 Br -0.05 -0.42 33.16 -20.37 -0.68 -1.10 16 22 C -0.06 -0.03 8.40 22.27 0.19 0.16 16 23 C -0.15 0.42 5.35 -19.85 -0.11 0.31 16 24 C -0.06 0.22 2.80 71.24 0.20 0.42 16 25 O -0.54 0.52 12.83 -148.98 -1.91 -1.39 16 26 Si 0.73 -1.34 29.88 68.60 2.05 0.71 16 27 C -0.03 0.17 9.68 22.26 0.22 0.39 16 28 C -0.19 1.11 9.04 22.36 0.20 1.32 16 29 C -0.13 1.28 7.58 31.12 0.24 1.52 16 30 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 31 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 32 H 0.06 0.52 5.88 -2.39 -0.01 0.50 16 33 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 34 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 35 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 36 H 0.06 0.54 5.88 -2.39 -0.01 0.52 16 37 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 38 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 39 H 0.42 -3.72 8.84 -92.71 -0.82 -4.54 16 40 H 0.11 -0.74 8.14 -2.38 -0.02 -0.76 16 41 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 42 H 0.42 -7.06 8.73 -92.70 -0.81 -7.87 16 43 H 0.13 -1.75 7.66 -2.39 -0.02 -1.77 16 44 H 0.13 -1.75 7.66 -2.39 -0.02 -1.77 16 45 H 0.14 -0.11 4.83 -2.91 -0.01 -0.13 16 46 H 0.14 -0.91 7.96 -2.39 -0.02 -0.93 16 47 H 0.39 -2.16 8.70 -74.06 -0.64 -2.81 16 48 H -0.30 -1.62 7.11 99.48 0.71 -0.92 16 49 H -0.29 -0.89 7.01 99.48 0.70 -0.20 16 50 H 0.16 -1.45 8.06 -2.91 -0.02 -1.48 16 51 H 0.17 -2.36 6.30 -2.91 -0.02 -2.38 16 52 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 53 H 0.13 -2.05 8.09 -2.38 -0.02 -2.07 16 Total: 0.00 -32.28 452.00 -2.13 -34.41 By element: Atomic # 1 Polarization: -26.99 SS G_CDS: -1.26 Total: -28.25 kcal Atomic # 6 Polarization: 4.87 SS G_CDS: 5.79 Total: 10.66 kcal Atomic # 7 Polarization: 7.55 SS G_CDS: -5.40 Total: 2.15 kcal Atomic # 8 Polarization: -15.95 SS G_CDS: -2.64 Total: -18.59 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: 2.05 Total: 0.71 kcal Atomic # 35 Polarization: -0.42 SS G_CDS: -0.68 Total: -1.10 kcal Total: -32.28 -2.13 -34.41 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_6201210.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.690 kcal (2) G-P(sol) polarization free energy of solvation -32.278 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.968 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.134 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds