Wall clock time and date at job start Sun Mar 7 2021 00:29:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47127 * 2 1 4 4 C 1.52999 * 109.47317 * 119.99511 * 2 1 3 5 5 O 1.45194 * 109.47339 * 239.99574 * 2 1 3 6 6 C 1.34639 * 116.99841 * 60.00459 * 5 2 1 7 7 O 1.21508 * 119.99991 * 359.97438 * 6 5 2 8 8 N 1.34780 * 120.00005 * 179.97438 * 6 5 2 9 9 C 1.46505 * 119.99900 * 179.97438 * 8 6 5 10 10 H 1.08994 * 112.84899 * 23.80343 * 9 8 6 11 11 C 1.53782 * 113.61231 * 155.00465 * 9 8 6 12 12 C 1.53780 * 87.07914 * 139.98162 * 11 9 8 13 13 H 1.08996 * 113.61681 * 89.11464 * 12 11 9 14 14 N 1.46507 * 113.61039 * 219.93248 * 12 11 9 15 15 C 1.34770 * 119.99879 * 204.99978 * 14 12 11 16 16 O 1.21641 * 120.00459 * 0.02562 * 15 14 12 17 17 C 1.47193 * 119.99996 * 179.97438 * 15 14 12 18 18 C 1.36010 * 123.45963 * 359.71108 * 17 15 14 19 19 S 1.70446 * 110.81491 * 179.85350 * 18 17 15 20 20 C 1.75498 * 92.44583 * 0.34708 * 19 18 17 21 21 C 1.50704 * 124.71484 * 179.80597 * 20 19 18 22 22 O 1.42902 * 109.47035 * 245.00068 * 21 20 19 23 23 Si 1.86308 * 109.46736 * 4.99494 * 21 20 19 24 24 C 1.32768 * 110.57901 * 359.79897 * 20 19 18 25 25 C 1.53773 * 87.08273 * 334.56420 * 12 11 9 26 26 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.46832 * 60.00321 * 1 2 3 28 28 H 1.09004 * 109.47261 * 300.00303 * 1 2 3 29 29 H 1.08993 * 109.46955 * 60.00011 * 3 2 1 30 30 H 1.09000 * 109.47050 * 179.97438 * 3 2 1 31 31 H 1.09001 * 109.47002 * 299.99574 * 3 2 1 32 32 H 1.09002 * 109.46716 * 60.00091 * 4 2 1 33 33 H 1.09000 * 109.47486 * 180.02562 * 4 2 1 34 34 H 1.09001 * 109.47362 * 300.00732 * 4 2 1 35 35 H 0.97001 * 119.99769 * 0.02562 * 8 6 5 36 36 H 1.09000 * 113.60703 * 254.52583 * 11 9 8 37 37 H 1.08993 * 113.61910 * 25.34280 * 11 9 8 38 38 H 0.97003 * 119.99744 * 25.00040 * 14 12 11 39 39 H 1.08001 * 124.58963 * 359.97438 * 18 17 15 40 40 H 1.08995 * 109.47227 * 124.99679 * 21 20 19 41 41 H 0.96698 * 113.99973 * 180.02562 * 22 21 20 42 42 H 1.48500 * 109.99712 * 178.68297 * 23 21 20 43 43 H 1.48500 * 109.99901 * 300.00100 * 23 21 20 44 44 H 1.07999 * 123.46286 * 179.97438 * 24 20 19 45 45 H 1.09004 * 113.61844 * 270.88691 * 25 12 11 46 46 H 1.09004 * 113.61548 * 139.98502 * 25 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7211 1.2493 5 8 2.0140 -0.6845 -1.1854 6 6 1.6523 -0.1729 -2.3772 7 8 0.9510 0.8182 -2.4252 8 7 2.0682 -0.7601 -3.5168 9 6 1.6742 -0.2038 -4.8136 10 1 1.4211 0.8551 -4.7605 11 6 2.6477 -0.5482 -5.9531 12 6 1.4104 -0.7467 -6.8444 13 1 1.0840 0.1635 -7.3475 14 7 1.5190 -1.8911 -7.7527 15 6 0.8064 -1.9136 -8.8964 16 8 0.0734 -0.9837 -9.1748 17 6 0.9160 -3.0631 -9.8092 18 6 1.7176 -4.1358 -9.5714 19 16 1.5931 -5.2763 -10.8320 20 6 0.4413 -4.2882 -11.7135 21 6 -0.1746 -4.6625 -13.0370 22 8 0.2572 -3.7416 -14.0408 23 14 0.3580 -6.3855 -13.5046 24 6 0.1878 -3.1651 -11.0523 25 6 0.6286 -1.0525 -5.5560 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 0.5139 0.8900 29 1 1.6767 1.9563 0.8899 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9564 -0.8900 32 1 1.6767 -1.7488 1.2493 33 1 3.1300 -0.7207 1.2495 34 1 1.6766 -0.2073 2.1393 35 1 2.6277 -1.5516 -3.4784 36 1 3.2759 0.2886 -6.2584 37 1 3.2150 -1.4628 -5.7812 38 1 2.1038 -2.6326 -7.5308 39 1 2.3462 -4.2504 -8.7007 40 1 -1.2609 -4.6276 -12.9550 41 1 -0.1016 -3.9218 -14.9204 42 1 -0.2681 -6.7786 -14.7925 43 1 1.8373 -6.4462 -13.6195 44 1 -0.4926 -2.4054 -11.4078 45 1 0.6428 -2.1060 -5.2762 46 1 -0.3732 -0.6231 -5.5407 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_6894386.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:29:45 Heat of formation + Delta-G solvation = -86.417433 kcal Electronic energy + Delta-G solvation = -28448.666240 eV Core-core repulsion = 24239.787041 eV Total energy + Delta-G solvation = -4208.879199 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.133 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.86996 -41.19941 -39.90750 -38.66843 -37.81950 -37.18902 -35.48824 -34.86098 -33.49570 -31.75697 -28.31978 -28.27478 -27.00398 -26.93699 -26.69537 -24.91448 -22.99839 -21.84204 -21.51766 -20.87318 -20.31178 -19.14158 -18.77541 -18.52853 -18.16405 -17.82155 -17.06695 -17.06176 -16.44920 -16.15981 -15.95488 -15.89614 -15.49697 -15.38004 -15.26643 -14.67962 -14.35365 -14.19452 -14.06274 -13.91366 -13.81206 -13.72138 -13.58003 -13.41882 -13.11740 -12.85766 -12.81701 -12.75300 -12.57642 -12.47249 -12.43489 -12.32989 -12.18317 -12.02142 -11.97740 -11.28728 -10.95166 -10.87471 -10.64427 -10.27334 -10.07166 -9.96859 -9.49591 -5.16053 -0.36606 0.31678 0.67947 0.90329 1.14313 1.17598 1.48650 1.81240 1.87732 2.09728 2.34537 3.11719 3.18219 3.26622 3.37732 3.57741 3.71796 3.74044 3.78936 3.82337 3.84393 3.97268 3.98239 4.24727 4.31928 4.43010 4.45780 4.48095 4.57167 4.64050 4.69113 4.69247 4.71994 4.79192 4.86511 4.91918 4.94417 4.96529 5.05583 5.09457 5.21579 5.27249 5.37988 5.42725 5.48887 5.60569 6.31414 6.38862 6.43360 7.19394 7.42866 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.184 4.184 4 C -0.142 4.142 5 O -0.365 6.365 6 C 0.650 3.350 7 O -0.564 6.564 8 N -0.700 5.700 9 C 0.144 3.856 10 H 0.125 0.875 11 C -0.153 4.153 12 C 0.129 3.871 13 H 0.124 0.876 14 N -0.715 5.715 15 C 0.581 3.419 16 O -0.529 6.529 17 C -0.155 4.155 18 C -0.208 4.208 19 S 0.207 5.793 20 C -0.197 4.197 21 C -0.035 4.035 22 O -0.532 6.532 23 Si 0.646 3.354 24 C -0.054 4.054 25 C -0.166 4.166 26 H 0.060 0.940 27 H 0.087 0.913 28 H 0.072 0.928 29 H 0.072 0.928 30 H 0.060 0.940 31 H 0.087 0.913 32 H 0.067 0.933 33 H 0.067 0.933 34 H 0.082 0.918 35 H 0.406 0.594 36 H 0.089 0.911 37 H 0.094 0.906 38 H 0.400 0.600 39 H 0.172 0.828 40 H 0.087 0.913 41 H 0.383 0.617 42 H -0.237 1.237 43 H -0.234 1.234 44 H 0.156 0.844 45 H 0.091 0.909 46 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.269 -6.423 1.631 7.004 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.241 4.241 4 C -0.199 4.199 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.453 6.453 8 N -0.359 5.359 9 C 0.039 3.961 10 H 0.143 0.857 11 C -0.192 4.192 12 C 0.023 3.977 13 H 0.142 0.858 14 N -0.366 5.366 15 C 0.367 3.633 16 O -0.406 6.406 17 C -0.173 4.173 18 C -0.347 4.347 19 S 0.473 5.527 20 C -0.314 4.314 21 C -0.147 4.147 22 O -0.340 6.340 23 Si 0.544 3.456 24 C -0.083 4.083 25 C -0.206 4.206 26 H 0.079 0.921 27 H 0.106 0.894 28 H 0.091 0.909 29 H 0.091 0.909 30 H 0.079 0.921 31 H 0.106 0.894 32 H 0.086 0.914 33 H 0.086 0.914 34 H 0.101 0.899 35 H 0.241 0.759 36 H 0.108 0.892 37 H 0.113 0.887 38 H 0.235 0.765 39 H 0.189 0.811 40 H 0.105 0.895 41 H 0.232 0.768 42 H -0.161 1.161 43 H -0.158 1.158 44 H 0.173 0.827 45 H 0.110 0.890 46 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 2.783 -6.892 1.142 7.520 hybrid contribution -0.260 1.408 -0.348 1.473 sum 2.523 -5.484 0.794 6.089 Atomic orbital electron populations 1.22523 0.93817 1.03003 1.04790 1.22121 0.94466 0.92246 0.81162 1.22524 1.01589 0.95232 1.04787 1.21878 1.02309 1.01189 0.94514 1.86303 1.71490 1.56467 1.13745 1.18158 0.78689 0.81502 0.81251 1.90924 1.40754 1.26665 1.86962 1.44668 1.55520 1.32713 1.02971 1.22292 0.95406 0.99691 0.78674 0.85672 1.23803 0.97228 1.03541 0.94640 1.22247 0.96345 0.90895 0.88222 0.85800 1.45726 1.46936 1.22567 1.21398 1.17635 0.79614 0.85658 0.80436 1.90830 1.38352 1.36854 1.74570 1.20200 1.02669 0.96481 0.97996 1.25784 1.04107 0.99240 1.05532 1.83105 1.38837 1.20039 1.10729 1.23527 1.06125 1.00709 1.00999 1.24036 1.00806 1.03514 0.86316 1.86617 1.74378 1.52366 1.20601 0.95334 0.83061 0.78041 0.89177 1.21031 0.98900 0.96852 0.91515 1.24051 1.00144 1.01474 0.94940 0.92134 0.89393 0.90928 0.90923 0.92125 0.89411 0.91409 0.91407 0.89929 0.75866 0.89247 0.88747 0.76512 0.81082 0.89474 0.76826 1.16060 1.15767 0.82673 0.89042 0.89850 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 2 C 0.14 0.17 1.13 -90.62 -0.10 0.07 16 3 C -0.18 -0.24 8.37 37.16 0.31 0.07 16 4 C -0.14 0.11 8.85 37.16 0.33 0.44 16 5 O -0.37 -0.80 9.94 -40.32 -0.40 -1.20 16 6 C 0.65 1.65 8.06 54.06 0.44 2.09 16 7 O -0.56 -2.85 11.48 -19.28 -0.22 -3.07 16 8 N -0.70 0.50 5.36 -57.93 -0.31 0.19 16 9 C 0.14 -0.19 4.24 -67.11 -0.28 -0.47 16 10 H 0.13 0.02 7.46 -51.93 -0.39 -0.36 16 11 C -0.15 0.50 7.58 -25.92 -0.20 0.31 16 12 C 0.13 -0.15 4.24 -67.12 -0.28 -0.44 16 13 H 0.12 0.07 7.46 -51.93 -0.39 -0.32 16 14 N -0.72 0.80 5.33 -54.17 -0.29 0.51 16 15 C 0.58 1.44 7.79 -12.63 -0.10 1.34 16 16 O -0.53 -3.45 16.40 5.24 0.09 -3.36 16 17 C -0.16 -0.20 5.98 -104.63 -0.63 -0.83 16 18 C -0.21 0.30 10.38 29.93 0.31 0.61 16 19 S 0.21 -0.24 20.20 -107.50 -2.17 -2.41 16 20 C -0.20 -0.16 5.69 -36.18 -0.21 -0.36 16 21 C -0.03 0.02 2.93 36.01 0.11 0.12 16 22 O -0.53 -0.47 12.86 -35.23 -0.45 -0.93 16 23 Si 0.65 -1.00 30.92 -169.99 -5.26 -6.26 16 24 C -0.05 -0.12 9.95 -39.02 -0.39 -0.51 16 25 C -0.17 0.19 7.68 -25.92 -0.20 -0.01 16 26 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 27 H 0.09 0.31 5.88 -51.93 -0.31 0.01 16 28 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 31 H 0.09 0.30 5.88 -51.93 -0.31 0.00 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 34 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.41 -1.21 8.84 -40.82 -0.36 -1.57 16 36 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 37 H 0.09 -0.47 8.10 -51.93 -0.42 -0.89 16 38 H 0.40 -1.62 7.23 -40.82 -0.30 -1.92 16 39 H 0.17 -0.82 7.01 -52.49 -0.37 -1.19 16 40 H 0.09 -0.19 7.96 -51.93 -0.41 -0.60 16 41 H 0.38 -1.27 8.74 45.56 0.40 -0.87 16 42 H -0.24 0.00 7.11 56.52 0.40 0.40 16 43 H -0.23 -0.26 7.11 56.52 0.40 0.15 16 44 H 0.16 0.46 8.06 -52.49 -0.42 0.04 16 45 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 46 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 LS Contribution 391.98 15.07 5.91 5.91 Total: 0.00 -9.70 391.98 -10.38 -20.09 By element: Atomic # 1 Polarization: -5.25 SS G_CDS: -6.69 Total: -11.94 kcal Atomic # 6 Polarization: 3.06 SS G_CDS: -0.58 Total: 2.48 kcal Atomic # 7 Polarization: 1.30 SS G_CDS: -0.60 Total: 0.70 kcal Atomic # 8 Polarization: -7.56 SS G_CDS: -0.99 Total: -8.55 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.26 Total: -6.26 kcal Atomic # 16 Polarization: -0.24 SS G_CDS: -2.17 Total: -2.41 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -9.70 -10.38 -20.09 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_6894386.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.330 kcal (2) G-P(sol) polarization free energy of solvation -9.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.034 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.384 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.087 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds