Wall clock time and date at job start Sun Mar 7 2021 00:30:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.36766 * 125.80254 * 2 1 4 4 C 1.47266 * 126.94063 * 0.03217 * 3 2 1 5 5 O 1.21625 * 119.99885 * 359.97438 * 4 3 2 6 6 N 1.34775 * 119.99915 * 179.97438 * 4 3 2 7 7 C 1.46500 * 119.99875 * 179.97438 * 6 4 3 8 8 H 1.09000 * 112.85014 * 23.80544 * 7 6 4 9 9 C 1.53789 * 113.61333 * 155.00207 * 7 6 4 10 10 C 1.53783 * 87.08072 * 139.98003 * 9 7 6 11 11 H 1.09000 * 113.61447 * 89.19637 * 10 9 7 12 12 N 1.46494 * 113.61480 * 220.01931 * 10 9 7 13 13 C 1.34780 * 119.99948 * 205.00300 * 12 10 9 14 14 O 1.21504 * 119.99832 * 359.97438 * 13 12 10 15 15 O 1.34633 * 119.99689 * 179.97438 * 13 12 10 16 16 C 1.45205 * 117.00060 * 179.97438 * 15 13 12 17 17 C 1.53008 * 109.46587 * 59.99840 * 16 15 13 18 18 C 1.52998 * 109.47431 * 179.97438 * 16 15 13 19 19 C 1.52996 * 109.47152 * 300.00586 * 16 15 13 20 20 C 1.53783 * 113.61531 * 252.49797 * 7 6 4 21 21 C 1.46688 * 106.11816 * 179.90224 * 3 2 1 22 22 C 1.34485 * 106.32736 * 0.36618 * 21 3 2 23 23 C 1.50706 * 125.56982 * 179.80102 * 22 21 3 24 24 O 1.42892 * 109.47246 * 64.99922 * 23 22 21 25 25 Si 1.86296 * 109.47090 * 185.00064 * 23 22 21 26 26 N 1.34662 * 125.79949 * 180.31740 * 2 1 3 27 27 H 1.09001 * 109.46953 * 269.70913 * 1 2 3 28 28 H 1.09000 * 109.47318 * 29.70511 * 1 2 3 29 29 H 1.09000 * 109.47161 * 149.71141 * 1 2 3 30 30 H 0.96995 * 120.00222 * 0.02562 * 6 4 3 31 31 H 1.08999 * 113.61320 * 254.52878 * 9 7 6 32 32 H 1.08995 * 113.61294 * 25.43115 * 9 7 6 33 33 H 0.97003 * 120.00152 * 24.99990 * 12 10 9 34 34 H 1.09002 * 109.46949 * 60.00575 * 17 16 15 35 35 H 1.08997 * 109.46889 * 180.02562 * 17 16 15 36 36 H 1.08998 * 109.47397 * 300.00202 * 17 16 15 37 37 H 1.09001 * 109.46957 * 60.00237 * 18 16 15 38 38 H 1.08997 * 109.47109 * 180.02562 * 18 16 15 39 39 H 1.08994 * 109.47131 * 300.00704 * 18 16 15 40 40 H 1.09002 * 109.47419 * 59.98926 * 19 16 15 41 41 H 1.09001 * 109.47514 * 179.97438 * 19 16 15 42 42 H 1.09001 * 109.46618 * 299.99385 * 19 16 15 43 43 H 1.09003 * 113.61250 * 334.56471 * 20 7 6 44 44 H 1.08997 * 113.61608 * 105.46678 * 20 7 6 45 45 H 1.07999 * 126.83592 * 180.14500 * 21 3 2 46 46 H 1.09002 * 109.46955 * 304.99478 * 23 22 21 47 47 H 0.96697 * 114.00204 * 60.00177 * 24 23 22 48 48 H 1.48503 * 110.00159 * 58.67804 * 25 23 22 49 49 H 1.48501 * 110.00082 * 179.97438 * 25 23 22 50 50 H 0.96996 * 124.85205 * 359.97438 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8703 2.5156 0.0007 5 8 0.6840 2.7839 0.0008 6 7 2.7850 3.5054 0.0011 7 6 2.3504 4.9044 0.0012 8 1 1.3471 5.0359 0.4063 9 6 3.3871 5.8715 0.5971 10 6 3.0057 6.8487 -0.5274 11 1 2.1822 7.5137 -0.2673 12 7 4.1512 7.5592 -1.1010 13 6 3.9732 8.7556 -1.6956 14 8 2.8626 9.2445 -1.7564 15 8 5.0261 9.4088 -2.2223 16 6 4.7602 10.6920 -2.8476 17 6 4.1582 11.6474 -1.8152 18 6 6.0675 11.2790 -3.3835 19 6 3.7746 10.5022 -4.0023 20 6 2.5727 5.6187 -1.3425 21 6 3.6883 0.6151 0.0024 22 6 3.6096 -0.7274 -0.0046 23 6 4.7820 -1.6743 -0.0095 24 8 5.5102 -1.5370 1.2123 25 14 4.1657 -3.4249 -0.1718 26 7 2.2948 -1.0922 -0.0061 27 1 -0.3633 -0.0052 1.0277 28 1 -0.3634 0.8926 -0.5092 29 1 -0.3633 -0.8874 -0.5183 30 1 3.7311 3.2914 0.0006 31 1 3.1279 6.2297 1.5934 32 1 4.4124 5.5078 0.5304 33 1 5.0379 7.1687 -1.0528 34 1 4.8603 11.7827 -0.9925 35 1 3.9581 12.6105 -2.2846 36 1 3.2268 11.2294 -1.4330 37 1 6.4968 10.5985 -4.1189 38 1 5.8679 12.2424 -3.8525 39 1 6.7693 11.4142 -2.5606 40 1 2.8433 10.0841 -3.6202 41 1 3.5746 11.4655 -4.4715 42 1 4.2035 9.8215 -4.7378 43 1 3.3755 5.1859 -1.9394 44 1 1.6562 5.7727 -1.9120 45 1 4.5891 1.2109 0.0052 46 1 5.4350 -1.4397 -0.8501 47 1 4.9902 -1.7310 2.0041 48 1 3.3796 -3.5727 -1.4230 49 1 5.3124 -4.3685 -0.1784 50 1 1.9734 -2.0074 -0.0108 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13941094_9865296.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:30:01 Heat of formation + Delta-G solvation = -80.690144 kcal Electronic energy + Delta-G solvation = -31020.203542 eV Core-core repulsion = 26629.683061 eV Total energy + Delta-G solvation = -4390.520481 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.51684 -41.77768 -40.79019 -39.28165 -37.88209 -37.69926 -35.40322 -34.76245 -33.42513 -32.82516 -31.91402 -29.00562 -28.29442 -28.24793 -26.84164 -26.46580 -25.21176 -23.66391 -22.47597 -21.62899 -21.44061 -20.89468 -20.28496 -19.01977 -18.75770 -17.99461 -17.70638 -17.09598 -17.02463 -16.92852 -16.57857 -16.12530 -15.85664 -15.74708 -15.38830 -15.28997 -15.10386 -14.95001 -14.53815 -14.44813 -14.19988 -14.15988 -13.88264 -13.76702 -13.61514 -13.42392 -13.39168 -13.08644 -12.82286 -12.78830 -12.75748 -12.63076 -12.49837 -12.38041 -12.30123 -12.26503 -12.13031 -11.92484 -11.25439 -10.91142 -10.83323 -10.53265 -10.17596 -9.99653 -9.80189 -9.17430 -5.36586 0.75740 0.98280 1.18435 1.22617 1.35697 1.70337 1.92426 1.96306 2.43985 2.62432 3.18528 3.25652 3.35590 3.48250 3.58670 3.80572 3.81390 3.81916 3.84124 3.87394 4.01005 4.10173 4.17281 4.31080 4.45959 4.50641 4.55260 4.57543 4.59765 4.66543 4.68112 4.71906 4.75689 4.78714 4.81600 4.89751 4.97097 4.97365 5.00109 5.06040 5.12088 5.23506 5.35873 5.40665 5.51622 5.60592 5.64561 5.68827 5.84090 6.28946 6.38925 6.45978 6.68283 7.45750 7.47663 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.125 3.875 3 C -0.242 4.242 4 C 0.595 3.405 5 O -0.546 6.546 6 N -0.716 5.716 7 C 0.131 3.869 8 H 0.123 0.877 9 C -0.153 4.153 10 C 0.143 3.857 11 H 0.125 0.875 12 N -0.700 5.700 13 C 0.650 3.350 14 O -0.565 6.565 15 O -0.366 6.366 16 C 0.137 3.863 17 C -0.184 4.184 18 C -0.142 4.142 19 C -0.184 4.184 20 C -0.166 4.166 21 C -0.128 4.128 22 C -0.029 4.029 23 C -0.033 4.033 24 O -0.534 6.534 25 Si 0.671 3.329 26 N -0.545 5.545 27 H 0.083 0.917 28 H 0.104 0.896 29 H 0.066 0.934 30 H 0.401 0.599 31 H 0.088 0.912 32 H 0.094 0.906 33 H 0.406 0.594 34 H 0.060 0.940 35 H 0.072 0.928 36 H 0.087 0.913 37 H 0.067 0.933 38 H 0.082 0.918 39 H 0.067 0.933 40 H 0.087 0.913 41 H 0.072 0.928 42 H 0.059 0.941 43 H 0.090 0.910 44 H 0.081 0.919 45 H 0.146 0.854 46 H 0.126 0.874 47 H 0.381 0.619 48 H -0.251 1.251 49 H -0.244 1.244 50 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.386 -3.619 1.947 4.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.006 3.994 3 C -0.252 4.252 4 C 0.385 3.615 5 O -0.425 6.425 6 N -0.366 5.366 7 C 0.025 3.975 8 H 0.140 0.860 9 C -0.192 4.192 10 C 0.039 3.961 11 H 0.142 0.858 12 N -0.358 5.358 13 C 0.404 3.596 14 O -0.454 6.454 15 O -0.280 6.280 16 C 0.100 3.900 17 C -0.241 4.241 18 C -0.199 4.199 19 C -0.241 4.241 20 C -0.207 4.207 21 C -0.153 4.153 22 C -0.137 4.137 23 C -0.145 4.145 24 O -0.339 6.339 25 Si 0.572 3.428 26 N -0.144 5.144 27 H 0.101 0.899 28 H 0.122 0.878 29 H 0.085 0.915 30 H 0.236 0.764 31 H 0.106 0.894 32 H 0.112 0.888 33 H 0.241 0.759 34 H 0.079 0.921 35 H 0.091 0.909 36 H 0.106 0.894 37 H 0.086 0.914 38 H 0.101 0.899 39 H 0.086 0.914 40 H 0.106 0.894 41 H 0.091 0.909 42 H 0.078 0.922 43 H 0.108 0.892 44 H 0.100 0.900 45 H 0.164 0.836 46 H 0.143 0.857 47 H 0.228 0.772 48 H -0.176 1.176 49 H -0.167 1.167 50 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 1.508 -3.820 0.980 4.222 hybrid contribution 1.131 -0.168 -0.363 1.200 sum 2.638 -3.988 0.616 4.821 Atomic orbital electron populations 1.20666 0.86507 1.04632 1.03936 1.20420 0.93809 0.85257 0.99867 1.20095 0.93038 0.92016 1.20042 1.17342 0.85277 0.84054 0.74845 1.90757 1.16583 1.84336 1.50848 1.45651 1.09722 1.05168 1.76089 1.22180 0.99684 0.79293 0.96373 0.85962 1.23802 1.00325 0.95669 0.99422 1.22312 0.88817 0.91456 0.93552 0.85768 1.44688 1.12175 1.18519 1.60462 1.18158 0.82902 0.81310 0.77243 1.90918 1.24458 1.67780 1.62228 1.86304 1.36852 1.35139 1.69748 1.22114 0.96619 0.78878 0.92378 1.22525 1.03190 0.99446 0.98964 1.21876 0.95236 1.01039 1.01744 1.22521 1.01022 1.03183 0.97401 1.24049 1.03014 0.95659 0.97930 1.21781 0.95643 0.92602 1.05237 1.20525 0.84373 0.95723 1.13103 1.24415 0.92619 1.06666 0.90789 1.86546 1.39663 1.92750 1.14930 0.95461 0.84789 0.75903 0.86679 1.41713 1.05547 1.08450 1.58728 0.89891 0.87762 0.91489 0.76432 0.89362 0.88789 0.75864 0.92123 0.90950 0.89398 0.91427 0.89945 0.91407 0.89387 0.90949 0.92155 0.89159 0.90035 0.83625 0.85707 0.77181 1.17607 1.16736 0.74741 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.05 9.89 36.01 0.36 0.41 16 2 C 0.13 0.06 7.17 -81.88 -0.59 -0.53 16 3 C -0.24 -0.37 6.29 -103.35 -0.65 -1.02 16 4 C 0.60 1.60 7.81 -12.59 -0.10 1.50 16 5 O -0.55 -3.09 14.41 5.26 0.08 -3.01 16 6 N -0.72 0.17 5.35 -54.14 -0.29 -0.12 16 7 C 0.13 -0.08 4.24 -67.11 -0.28 -0.36 16 8 H 0.12 0.11 7.46 -51.93 -0.39 -0.28 16 9 C -0.15 0.40 7.58 -25.91 -0.20 0.20 16 10 C 0.14 -0.10 4.24 -67.12 -0.28 -0.38 16 11 H 0.12 0.08 7.46 -51.93 -0.39 -0.31 16 12 N -0.70 0.05 5.36 -57.94 -0.31 -0.26 16 13 C 0.65 1.97 8.06 54.06 0.44 2.40 16 14 O -0.57 -3.07 11.48 -19.27 -0.22 -3.29 16 15 O -0.37 -0.97 9.94 -40.30 -0.40 -1.37 16 16 C 0.14 0.22 1.13 -90.62 -0.10 0.12 16 17 C -0.18 -0.30 8.37 37.16 0.31 0.02 16 18 C -0.14 0.06 8.85 37.16 0.33 0.39 16 19 C -0.18 -0.32 8.37 37.16 0.31 -0.01 16 20 C -0.17 0.07 7.68 -25.92 -0.20 -0.13 16 21 C -0.13 0.00 10.45 -37.50 -0.39 -0.39 16 22 C -0.03 0.03 6.09 -81.86 -0.50 -0.47 16 23 C -0.03 0.06 2.98 36.01 0.11 0.17 16 24 O -0.53 0.75 12.88 -35.23 -0.45 0.29 16 25 Si 0.67 -1.98 30.96 -169.99 -5.26 -7.24 16 26 N -0.54 0.88 5.41 -5.42 -0.03 0.85 16 27 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 28 H 0.10 0.17 6.45 -51.93 -0.33 -0.16 16 29 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 30 H 0.40 -0.95 7.85 -40.82 -0.32 -1.27 16 31 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.09 -0.38 8.09 -51.93 -0.42 -0.80 16 33 H 0.41 -0.91 8.84 -40.82 -0.36 -1.27 16 34 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 35 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.09 0.33 5.88 -51.93 -0.31 0.02 16 37 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 38 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 40 H 0.09 0.34 5.88 -51.93 -0.31 0.04 16 41 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 42 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 43 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 44 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 45 H 0.15 -0.22 7.70 -52.49 -0.40 -0.63 16 46 H 0.13 -0.21 7.96 -51.93 -0.41 -0.63 16 47 H 0.38 -1.91 8.70 45.56 0.40 -1.51 16 48 H -0.25 0.15 7.11 56.52 0.40 0.55 16 49 H -0.24 -0.13 7.11 56.52 0.40 0.28 16 50 H 0.41 -1.75 6.72 -40.82 -0.27 -2.02 16 LS Contribution 405.90 15.07 6.12 6.12 Total: 0.00 -9.65 405.90 -10.01 -19.66 By element: Atomic # 1 Polarization: -5.75 SS G_CDS: -7.79 Total: -13.54 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: -1.44 Total: 1.91 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.63 Total: 0.48 kcal Atomic # 8 Polarization: -6.38 SS G_CDS: -1.00 Total: -7.38 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: -5.26 Total: -7.24 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -9.65 -10.01 -19.66 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13941094_9865296.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.029 kcal (2) G-P(sol) polarization free energy of solvation -9.654 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.684 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.661 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.690 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds