Wall clock time and date at job start Sun Mar 7 2021 01:37:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45207 * 1 3 3 C 1.34228 * 117.00089 * 2 1 4 4 O 1.20820 * 119.99790 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99577 * 179.97438 * 3 2 1 6 6 N 1.46499 * 112.85182 * 335.62832 * 5 3 2 7 7 C 1.34773 * 120.00243 * 292.12032 * 6 5 3 8 8 O 1.21514 * 119.99829 * 5.04321 * 7 6 5 9 9 O 1.34638 * 120.00393 * 185.04683 * 7 6 5 10 10 C 1.45193 * 117.00125 * 179.97438 * 9 7 6 11 11 C 1.53004 * 109.47259 * 59.99858 * 10 9 7 12 12 C 1.52998 * 109.47001 * 179.97438 * 10 9 7 13 13 C 1.52999 * 109.47514 * 299.99909 * 10 9 7 14 14 C 1.53785 * 113.61173 * 204.43159 * 5 3 2 15 15 C 1.53776 * 87.08222 * 219.93901 * 14 5 3 16 16 H 1.09004 * 113.60825 * 270.80121 * 15 14 5 17 17 N 1.46498 * 113.61548 * 139.98485 * 15 14 5 18 18 C 1.34779 * 119.99789 * 154.99849 * 17 15 14 19 19 O 1.21694 * 120.00075 * 359.97438 * 18 17 15 20 20 C 1.46680 * 119.99689 * 179.97438 * 18 17 15 21 21 C 1.37870 * 126.23348 * 179.97438 * 20 18 17 22 22 C 1.39839 * 107.08600 * 179.97438 * 21 20 18 23 23 C 1.50697 * 126.06712 * 179.73798 * 22 21 20 24 24 O 1.42903 * 109.47215 * 64.99853 * 23 22 21 25 25 Si 1.86298 * 109.47243 * 185.00341 * 23 22 21 26 26 C 1.35446 * 107.86182 * 0.02562 * 22 21 20 27 27 N 1.35536 * 108.87745 * 359.97438 * 26 22 21 28 28 C 1.53779 * 113.68894 * 106.90184 * 5 3 2 29 29 H 1.09004 * 109.46572 * 60.00156 * 1 2 3 30 30 H 1.08996 * 109.47365 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47018 * 300.00286 * 1 2 3 32 32 H 0.97002 * 119.99953 * 112.12118 * 6 5 3 33 33 H 1.09002 * 109.47152 * 59.99502 * 11 10 9 34 34 H 1.09001 * 109.47383 * 179.97438 * 11 10 9 35 35 H 1.08998 * 109.47218 * 300.00465 * 11 10 9 36 36 H 1.08998 * 109.46787 * 60.00380 * 12 10 9 37 37 H 1.09001 * 109.47037 * 180.02562 * 12 10 9 38 38 H 1.08995 * 109.47247 * 299.99911 * 12 10 9 39 39 H 1.09004 * 109.47192 * 59.99971 * 13 10 9 40 40 H 1.09001 * 109.47354 * 179.97438 * 13 10 9 41 41 H 1.08998 * 109.46756 * 300.00538 * 13 10 9 42 42 H 1.09000 * 113.61296 * 105.38268 * 14 5 3 43 43 H 1.09002 * 113.69081 * 334.50000 * 14 5 3 44 44 H 0.96995 * 120.00130 * 334.99305 * 17 15 14 45 45 H 1.07998 * 126.45555 * 0.02562 * 21 20 18 46 46 H 1.09006 * 109.46727 * 305.00219 * 23 22 21 47 47 H 0.96696 * 113.99185 * 60.00554 * 24 23 22 48 48 H 1.48498 * 110.00058 * 179.97438 * 25 23 22 49 49 H 1.48497 * 109.99856 * 301.31706 * 25 23 22 50 50 H 1.08004 * 125.56356 * 179.97438 * 26 22 21 51 51 H 0.96993 * 125.67930 * 179.97438 * 27 26 22 52 52 H 1.09000 * 113.61798 * 25.43632 * 28 5 3 53 53 H 1.09004 * 113.61315 * 254.53749 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2092 -0.0005 5 6 3.5664 1.2747 0.0006 6 7 4.1986 0.0765 0.5582 7 6 4.0693 -0.2053 1.8698 8 8 3.3542 0.4824 2.5713 9 8 4.7327 -1.2487 2.4028 10 6 4.5466 -1.4926 3.8219 11 6 3.0665 -1.7590 4.1039 12 6 5.3726 -2.7098 4.2427 13 6 5.0041 -0.2665 4.6145 14 6 4.1143 2.5882 0.5833 15 6 5.1654 2.5559 -0.5386 16 1 6.0735 2.0158 -0.2706 17 7 5.4374 3.8701 -1.1259 18 6 6.6228 4.1101 -1.7208 19 8 7.4673 3.2352 -1.7695 20 6 6.8950 5.4258 -2.3093 21 6 8.0566 5.8096 -2.9450 22 6 7.8847 7.1375 -3.3483 23 6 8.8975 7.9811 -4.0788 24 8 9.1314 7.4281 -5.3756 25 14 8.2490 9.7189 -4.2524 26 6 6.6488 7.5330 -2.9600 27 7 6.0370 6.5020 -2.3278 28 6 4.1626 1.7156 -1.3467 29 1 -0.3632 0.5138 -0.8901 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3633 0.5139 0.8899 32 1 4.7102 -0.5140 -0.0167 33 1 2.7406 -2.6325 3.5392 34 1 2.9269 -1.9427 5.1692 35 1 2.4778 -0.8922 3.8039 36 1 6.4270 -2.5204 4.0418 37 1 5.2325 -2.8933 5.3080 38 1 5.0462 -3.5832 3.6781 39 1 4.4153 0.6004 4.3147 40 1 4.8639 -0.4496 5.6799 41 1 6.0584 -0.0767 4.4136 42 1 4.5378 2.4797 1.5819 43 1 3.4196 3.4247 0.5069 44 1 4.7645 4.5675 -1.0868 45 1 8.9337 5.1995 -3.1026 46 1 9.8312 7.9961 -3.5165 47 1 8.3420 7.3839 -5.9324 48 1 9.2389 10.5610 -4.9707 49 1 6.9600 9.7087 -4.9896 50 1 6.2207 8.5104 -3.1270 51 1 5.1436 6.5198 -1.9506 52 1 3.4802 2.3126 -1.9517 53 1 4.6251 0.9026 -1.9064 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13976896_10543058.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:37:38 Heat of formation + Delta-G solvation = -149.283862 kcal Electronic energy + Delta-G solvation = -38476.272694 eV Core-core repulsion = 33317.187242 eV Total energy + Delta-G solvation = -5159.085452 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.187 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -42.81984 -42.39865 -41.54992 -40.69381 -39.55939 -38.06195 -37.78326 -37.49956 -35.75546 -35.04878 -33.55779 -32.44556 -30.73090 -29.36427 -28.38646 -28.31931 -27.36580 -27.19023 -26.28249 -24.34591 -24.02797 -22.43262 -21.37046 -21.22001 -20.88564 -20.67256 -19.84913 -19.41892 -19.25622 -18.25443 -17.62773 -17.52483 -17.48366 -17.22554 -17.10941 -16.72082 -16.59463 -16.26271 -15.95647 -15.71595 -15.61639 -15.38018 -14.98760 -14.92344 -14.65572 -14.51655 -14.47290 -14.43845 -13.88361 -13.83190 -13.71931 -13.63400 -13.40927 -13.35699 -13.18973 -13.11795 -12.94235 -12.88930 -12.65540 -12.56110 -12.44394 -12.38261 -12.21195 -11.92371 -11.84228 -11.80124 -11.43357 -11.38629 -11.17972 -10.56763 -10.46717 -10.35900 -9.95200 -9.29594 -4.82591 0.35215 0.75890 0.97211 1.37013 1.40756 1.56240 1.68218 1.69653 1.95988 2.10031 2.14935 2.22579 2.83625 2.92107 3.01248 3.35975 3.54350 3.57950 3.71125 3.76215 3.77433 3.91901 3.95677 4.01189 4.16247 4.17860 4.21213 4.25137 4.36693 4.38972 4.48421 4.53433 4.59134 4.59737 4.66451 4.68607 4.73438 4.75396 4.76776 4.84016 4.86243 4.90722 4.95793 5.04592 5.14742 5.19137 5.25381 5.25794 5.30017 5.48413 5.59485 5.74659 6.17972 6.30274 6.48343 6.50424 6.64619 6.99815 7.18579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.358 6.358 3 C 0.474 3.526 4 O -0.521 6.521 5 C 0.174 3.826 6 N -0.677 5.677 7 C 0.654 3.346 8 O -0.580 6.580 9 O -0.363 6.363 10 C 0.129 3.871 11 C -0.179 4.179 12 C -0.138 4.138 13 C -0.180 4.180 14 C -0.122 4.122 15 C 0.138 3.862 16 H 0.119 0.881 17 N -0.704 5.704 18 C 0.594 3.406 19 O -0.567 6.567 20 C -0.070 4.070 21 C -0.101 4.101 22 C -0.224 4.224 23 C -0.059 4.059 24 O -0.557 6.557 25 Si 0.785 3.215 26 C 0.060 3.940 27 N -0.516 5.516 28 C -0.123 4.123 29 H 0.070 0.930 30 H 0.125 0.875 31 H 0.055 0.945 32 H 0.427 0.573 33 H 0.061 0.939 34 H 0.086 0.914 35 H 0.062 0.938 36 H 0.069 0.931 37 H 0.098 0.902 38 H 0.070 0.930 39 H 0.065 0.935 40 H 0.086 0.914 41 H 0.062 0.938 42 H 0.085 0.915 43 H 0.121 0.879 44 H 0.414 0.586 45 H 0.127 0.873 46 H 0.109 0.891 47 H 0.384 0.616 48 H -0.314 1.314 49 H -0.268 1.268 50 H 0.212 0.788 51 H 0.437 0.563 52 H 0.124 0.876 53 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.309 1.346 1.512 4.761 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.274 6.274 3 C 0.316 3.684 4 O -0.409 6.409 5 C 0.085 3.915 6 N -0.339 5.339 7 C 0.408 3.592 8 O -0.470 6.470 9 O -0.277 6.277 10 C 0.092 3.908 11 C -0.236 4.236 12 C -0.195 4.195 13 C -0.237 4.237 14 C -0.161 4.161 15 C 0.032 3.968 16 H 0.137 0.863 17 N -0.355 5.355 18 C 0.383 3.617 19 O -0.445 6.445 20 C -0.183 4.183 21 C -0.128 4.128 22 C -0.231 4.231 23 C -0.168 4.168 24 O -0.365 6.365 25 Si 0.689 3.311 26 C -0.079 4.079 27 N -0.113 5.113 28 C -0.162 4.162 29 H 0.089 0.911 30 H 0.144 0.856 31 H 0.074 0.926 32 H 0.267 0.733 33 H 0.081 0.919 34 H 0.105 0.895 35 H 0.081 0.919 36 H 0.089 0.911 37 H 0.117 0.883 38 H 0.089 0.911 39 H 0.084 0.916 40 H 0.105 0.895 41 H 0.081 0.919 42 H 0.103 0.897 43 H 0.139 0.861 44 H 0.251 0.749 45 H 0.145 0.855 46 H 0.127 0.873 47 H 0.233 0.767 48 H -0.243 1.243 49 H -0.194 1.194 50 H 0.228 0.772 51 H 0.278 0.722 52 H 0.142 0.858 53 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -4.077 1.789 1.708 4.769 hybrid contribution -0.865 -0.869 -0.878 1.508 sum -4.942 0.921 0.831 5.096 Atomic orbital electron populations 1.23522 0.74877 1.05512 1.02504 1.86516 1.24832 1.32915 1.83093 1.23870 0.91760 0.81586 0.71224 1.90659 1.66745 1.36984 1.46501 1.20822 0.83949 0.86767 0.99960 1.44079 1.56554 1.26903 1.06373 1.18146 0.78350 0.79593 0.83063 1.90938 1.42364 1.53006 1.60688 1.86326 1.65770 1.46501 1.29124 1.22382 0.96931 0.97101 0.74345 1.22458 0.94821 1.02638 1.03657 1.21897 0.99872 0.94806 1.02958 1.22477 1.01850 0.98006 1.01387 1.23696 0.97618 0.95045 0.99762 1.22304 0.97646 0.84242 0.92560 0.86333 1.45592 1.16575 1.15200 1.58131 1.17214 0.81748 0.85646 0.77047 1.90858 1.47200 1.46385 1.60078 1.20096 0.94452 0.89573 1.14145 1.21238 0.96793 0.95925 0.98808 1.19867 0.97443 0.95911 1.09843 1.24718 1.01642 1.06863 0.83534 1.86572 1.39151 1.84503 1.26300 0.94269 0.76449 0.72060 0.88344 1.22364 0.93100 0.94258 0.98135 1.41880 1.15845 1.09295 1.44310 1.23875 0.98049 1.01400 0.92868 0.91113 0.85646 0.92638 0.73337 0.91949 0.89511 0.91856 0.91149 0.88302 0.91139 0.91567 0.89524 0.91868 0.89652 0.86092 0.74930 0.85541 0.87340 0.76675 1.24280 1.19388 0.77200 0.72187 0.85814 0.86577 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 113.37 1.20 1.21 16 2 O -0.36 -1.73 10.28 -51.40 -0.53 -2.26 16 3 C 0.47 2.38 6.47 71.24 0.46 2.84 16 4 O -0.52 -4.56 15.81 21.98 0.35 -4.22 16 5 C 0.17 -0.08 1.01 3.38 0.00 -0.08 16 6 N -0.68 0.20 4.90 -551.33 -2.70 -2.50 16 7 C 0.65 3.39 7.53 129.79 0.98 4.37 16 8 O -0.58 -5.70 10.57 19.80 0.21 -5.49 16 9 O -0.36 -1.55 9.94 -55.47 -0.55 -2.10 16 10 C 0.13 0.25 1.13 -10.79 -0.01 0.24 16 11 C -0.18 -0.43 8.37 71.98 0.60 0.17 16 12 C -0.14 0.36 8.85 71.98 0.64 1.00 16 13 C -0.18 -0.38 8.37 71.98 0.60 0.23 16 14 C -0.12 0.18 6.62 31.12 0.21 0.39 16 15 C 0.14 -0.43 4.15 45.52 0.19 -0.25 16 16 H 0.12 0.00 7.46 -2.38 -0.02 -0.02 16 17 N -0.70 2.98 5.35 -444.00 -2.38 0.61 16 18 C 0.59 1.85 7.79 86.45 0.67 2.52 16 19 O -0.57 -6.74 16.48 -4.33 -0.07 -6.81 16 20 C -0.07 -0.06 7.06 40.35 0.28 0.23 16 21 C -0.10 -0.47 10.59 22.57 0.24 -0.23 16 22 C -0.22 0.13 5.43 -20.12 -0.11 0.02 16 23 C -0.06 0.01 3.02 71.23 0.22 0.22 16 24 O -0.56 -2.42 12.88 -148.98 -1.92 -4.34 16 25 Si 0.78 -3.55 30.60 68.60 2.10 -1.45 16 26 C 0.06 -0.42 10.45 83.48 0.87 0.45 16 27 N -0.52 3.88 5.99 -183.62 -1.10 2.78 16 28 C -0.12 0.65 7.16 31.12 0.22 0.88 16 29 H 0.07 -0.06 8.13 -2.38 -0.02 -0.08 16 30 H 0.13 -0.59 8.14 -2.39 -0.02 -0.61 16 31 H 0.05 0.13 8.13 -2.39 -0.02 0.11 16 32 H 0.43 -2.12 8.79 -92.71 -0.81 -2.93 16 33 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 34 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 35 H 0.06 0.49 5.88 -2.39 -0.01 0.48 16 36 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 37 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 38 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 39 H 0.07 0.45 5.88 -2.38 -0.01 0.44 16 40 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 41 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 42 H 0.08 0.15 7.34 -2.39 -0.02 0.13 16 43 H 0.12 -0.30 7.37 -2.39 -0.02 -0.32 16 44 H 0.41 -4.31 7.86 -92.71 -0.73 -5.04 16 45 H 0.13 1.10 8.06 -2.91 -0.02 1.07 16 46 H 0.11 0.04 7.96 -2.38 -0.02 0.02 16 47 H 0.38 -0.80 8.70 -74.06 -0.64 -1.44 16 48 H -0.31 -1.56 7.11 99.48 0.71 -0.86 16 49 H -0.27 0.84 7.11 99.48 0.71 1.55 16 50 H 0.21 -3.00 6.21 -2.91 -0.02 -3.02 16 51 H 0.44 -6.49 8.19 -92.71 -0.76 -7.25 16 52 H 0.12 -0.85 8.10 -2.39 -0.02 -0.87 16 53 H 0.12 -0.91 8.10 -2.38 -0.02 -0.93 16 Total: 0.00 -30.92 438.86 -1.24 -32.16 By element: Atomic # 1 Polarization: -18.68 SS G_CDS: -1.91 Total: -20.59 kcal Atomic # 6 Polarization: 6.95 SS G_CDS: 7.26 Total: 14.21 kcal Atomic # 7 Polarization: 7.06 SS G_CDS: -6.18 Total: 0.89 kcal Atomic # 8 Polarization: -22.70 SS G_CDS: -2.51 Total: -25.22 kcal Atomic # 14 Polarization: -3.55 SS G_CDS: 2.10 Total: -1.45 kcal Total: -30.92 -1.24 -32.16 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13976896_10543058.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.122 kcal (2) G-P(sol) polarization free energy of solvation -30.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.046 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.238 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.162 kcal (6) G-S(sol) free energy of system = (1) + (5) -149.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds