Wall clock time and date at job start Sun Mar 7 2021 01:40:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34222 * 117.00325 * 2 1 4 4 O 1.20830 * 119.99855 * 359.97438 * 3 2 1 5 5 C 1.50703 * 120.00090 * 180.02562 * 3 2 1 6 6 N 1.46498 * 112.90503 * 335.61434 * 5 3 2 7 7 C 1.34779 * 120.00483 * 293.54094 * 6 5 3 8 8 O 1.21515 * 119.99620 * 5.00234 * 7 6 5 9 9 O 1.34628 * 120.00082 * 185.00485 * 7 6 5 10 10 C 1.45202 * 116.99775 * 180.02562 * 9 7 6 11 11 C 1.52999 * 109.47315 * 59.99969 * 10 9 7 12 12 C 1.53010 * 109.47089 * 179.97438 * 10 9 7 13 13 C 1.53003 * 109.46878 * 299.99609 * 10 9 7 14 14 C 1.53784 * 113.61219 * 204.36765 * 5 3 2 15 15 C 1.53783 * 87.07654 * 220.01544 * 14 5 3 16 16 H 1.08993 * 113.61678 * 270.79856 * 15 14 5 17 17 N 1.46506 * 113.61170 * 139.98004 * 15 14 5 18 18 C 1.34777 * 119.99901 * 154.99915 * 17 15 14 19 19 O 1.21554 * 119.99674 * 0.02562 * 18 17 15 20 20 C 1.47836 * 119.99961 * 180.02562 * 18 17 15 21 21 C 1.39522 * 120.55756 * 0.02562 * 20 18 17 22 22 N 1.31699 * 120.56144 * 180.02562 * 21 20 18 23 23 C 1.31917 * 121.88465 * 359.97438 * 22 21 20 24 24 C 1.38351 * 121.08124 * 359.97438 * 23 22 21 25 25 C 1.50697 * 120.35474 * 179.74593 * 24 23 22 26 26 O 1.42898 * 109.47236 * 245.00403 * 25 24 23 27 27 Si 1.86300 * 109.46817 * 4.99648 * 25 24 23 28 28 C 1.38362 * 119.30187 * 0.02562 * 24 23 22 29 29 C 1.53779 * 87.08301 * 25.43467 * 15 14 5 30 30 H 1.09001 * 109.47745 * 180.02562 * 1 2 3 31 31 H 1.08996 * 109.47462 * 300.00060 * 1 2 3 32 32 H 1.09005 * 109.47421 * 60.00015 * 1 2 3 33 33 H 0.97000 * 119.99942 * 113.53819 * 6 5 3 34 34 H 1.08998 * 109.46993 * 60.00187 * 11 10 9 35 35 H 1.09004 * 109.46941 * 180.02562 * 11 10 9 36 36 H 1.08996 * 109.46851 * 300.00062 * 11 10 9 37 37 H 1.09000 * 109.46496 * 59.99827 * 12 10 9 38 38 H 1.09004 * 109.47105 * 179.97438 * 12 10 9 39 39 H 1.08995 * 109.46924 * 299.99705 * 12 10 9 40 40 H 1.09002 * 109.46931 * 60.00802 * 13 10 9 41 41 H 1.08997 * 109.46879 * 180.02562 * 13 10 9 42 42 H 1.08998 * 109.47325 * 300.00094 * 13 10 9 43 43 H 1.08993 * 113.61315 * 105.46720 * 14 5 3 44 44 H 1.08994 * 113.61028 * 334.56371 * 14 5 3 45 45 H 0.96995 * 120.00127 * 335.00375 * 17 15 14 46 46 H 1.07996 * 119.71875 * 0.04241 * 21 20 18 47 47 H 1.08000 * 119.46464 * 180.02562 * 23 22 21 48 48 H 1.08994 * 109.47480 * 125.00047 * 25 24 23 49 49 H 0.96703 * 114.00744 * 59.99211 * 26 25 24 50 50 H 1.48505 * 109.99741 * 58.68411 * 27 25 24 51 51 H 1.48500 * 110.00217 * 179.97438 * 27 25 24 52 52 H 1.08001 * 120.85613 * 179.97438 * 28 24 23 53 53 H 1.08999 * 113.61886 * 89.11393 * 29 15 14 54 54 H 1.08997 * 113.61407 * 220.01993 * 29 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2747 -0.0006 6 7 4.2003 0.0770 0.5561 7 6 4.0490 -0.2205 1.8619 8 8 3.3140 0.4525 2.5572 9 8 4.7123 -1.2633 2.3959 10 6 4.5009 -1.5254 3.8084 11 6 3.0184 -1.8096 4.0581 12 6 5.3308 -2.7393 4.2316 13 6 4.9305 -0.3040 4.6235 14 6 4.1146 2.5886 0.5808 15 6 5.1636 2.5565 -0.5432 16 1 6.0725 2.0171 -0.2769 17 7 5.4338 3.8708 -1.1315 18 6 6.6178 4.1113 -1.7287 19 8 7.4613 3.2375 -1.7796 20 6 6.8906 5.4377 -2.3218 21 6 5.9309 6.4490 -2.2695 22 7 6.1737 7.6305 -2.7983 23 6 7.3190 7.9062 -3.3920 24 6 8.3221 6.9578 -3.4844 25 6 9.6220 7.2885 -4.1713 26 8 9.7607 6.4816 -5.3425 27 14 9.6293 9.0882 -4.6529 28 6 8.1169 5.7004 -2.9447 29 6 4.1596 1.7155 -1.3491 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3634 0.5138 0.8899 32 1 -0.3634 0.5138 -0.8900 33 1 4.7288 -0.5020 -0.0151 34 1 2.7125 -2.6798 3.4774 35 1 2.8598 -2.0059 5.1185 36 1 2.4270 -0.9452 3.7565 37 1 6.3870 -2.5371 4.0535 38 1 5.1725 -2.9357 5.2920 39 1 5.0243 -3.6092 3.6508 40 1 4.3389 0.5604 4.3220 41 1 4.7723 -0.5009 5.6838 42 1 5.9867 -0.1015 4.4456 43 1 4.5401 2.4806 1.5784 44 1 3.4184 3.4238 0.5046 45 1 4.7605 4.5678 -1.0911 46 1 4.9811 6.2615 -1.7911 47 1 7.4767 8.8885 -3.8122 48 1 10.4519 7.0904 -3.4932 49 1 9.0550 6.6060 -5.9919 50 1 9.4538 9.9373 -3.4473 51 1 10.9063 9.4274 -5.3308 52 1 8.8826 4.9409 -3.0029 53 1 3.4758 2.3120 -1.9529 54 1 4.6215 0.9027 -1.9094 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13976896_13287814.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:40:55 Heat of formation + Delta-G solvation = -153.606309 kcal Electronic energy + Delta-G solvation = -40008.293208 eV Core-core repulsion = 34720.794180 eV Total energy + Delta-G solvation = -5287.499028 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.187 amu Computer time = 2.00 seconds Orbital eigenvalues (eV) -42.77954 -41.88849 -41.52250 -40.65081 -39.62093 -38.06224 -37.91829 -37.48383 -35.77339 -35.08544 -33.82300 -33.74394 -32.62012 -29.37557 -28.38920 -28.32093 -27.38666 -27.28258 -27.14554 -25.54109 -24.02643 -23.87569 -22.66584 -21.74444 -21.22717 -20.69753 -19.43929 -19.29172 -19.18510 -18.32091 -18.03838 -17.85385 -17.68001 -17.48222 -17.43068 -17.06676 -16.66533 -16.63626 -16.48897 -16.02979 -15.78679 -15.70042 -15.39243 -15.12375 -14.91244 -14.66335 -14.51582 -14.45458 -14.38150 -14.21487 -13.85339 -13.69621 -13.63805 -13.48839 -13.35966 -13.18898 -13.10219 -12.94380 -12.88988 -12.71761 -12.63759 -12.54230 -12.37473 -12.20017 -12.19015 -11.90096 -11.81566 -11.50510 -11.42371 -11.18302 -11.08153 -10.61504 -10.57879 -10.53053 -10.38391 -10.19813 -5.02311 -0.58391 -0.02813 0.77621 0.98745 1.22997 1.38986 1.60157 1.62744 1.69886 1.94337 2.00796 2.61461 2.84692 2.93431 3.03424 3.10834 3.36778 3.39233 3.45675 3.56809 3.66290 3.71056 3.73152 3.74487 3.77261 3.91702 3.96627 4.10820 4.18214 4.23023 4.24612 4.28540 4.42674 4.46854 4.49900 4.54509 4.59385 4.60767 4.67872 4.70585 4.75062 4.75161 4.82888 4.83914 4.86029 4.91909 4.97800 5.14558 5.21485 5.25184 5.26014 5.30009 5.34027 5.48812 6.19191 6.28175 6.51085 6.64792 6.71981 6.95958 7.19636 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.358 6.358 3 C 0.474 3.526 4 O -0.521 6.521 5 C 0.174 3.826 6 N -0.676 5.676 7 C 0.654 3.346 8 O -0.581 6.581 9 O -0.363 6.363 10 C 0.129 3.871 11 C -0.179 4.179 12 C -0.138 4.138 13 C -0.180 4.180 14 C -0.125 4.125 15 C 0.137 3.863 16 H 0.121 0.879 17 N -0.698 5.698 18 C 0.571 3.429 19 O -0.565 6.565 20 C -0.197 4.197 21 C 0.147 3.853 22 N -0.495 5.495 23 C 0.132 3.868 24 C -0.177 4.177 25 C -0.071 4.071 26 O -0.553 6.553 27 Si 0.781 3.219 28 C 0.000 4.000 29 C -0.122 4.122 30 H 0.125 0.875 31 H 0.054 0.946 32 H 0.070 0.930 33 H 0.427 0.573 34 H 0.062 0.938 35 H 0.086 0.914 36 H 0.062 0.938 37 H 0.069 0.931 38 H 0.098 0.902 39 H 0.070 0.930 40 H 0.065 0.935 41 H 0.085 0.915 42 H 0.062 0.938 43 H 0.084 0.916 44 H 0.121 0.879 45 H 0.418 0.582 46 H 0.191 0.809 47 H 0.184 0.816 48 H 0.112 0.888 49 H 0.397 0.603 50 H -0.279 1.279 51 H -0.295 1.295 52 H 0.139 0.861 53 H 0.125 0.875 54 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.956 -0.633 -2.540 3.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.273 6.273 3 C 0.316 3.684 4 O -0.409 6.409 5 C 0.084 3.916 6 N -0.339 5.339 7 C 0.408 3.592 8 O -0.470 6.470 9 O -0.277 6.277 10 C 0.093 3.907 11 C -0.236 4.236 12 C -0.195 4.195 13 C -0.237 4.237 14 C -0.164 4.164 15 C 0.032 3.968 16 H 0.138 0.862 17 N -0.350 5.350 18 C 0.359 3.641 19 O -0.444 6.444 20 C -0.202 4.202 21 C -0.012 4.012 22 N -0.202 5.202 23 C -0.024 4.024 24 C -0.180 4.180 25 C -0.181 4.181 26 O -0.361 6.361 27 Si 0.685 3.315 28 C -0.026 4.026 29 C -0.161 4.161 30 H 0.143 0.857 31 H 0.073 0.927 32 H 0.089 0.911 33 H 0.267 0.733 34 H 0.081 0.919 35 H 0.104 0.896 36 H 0.081 0.919 37 H 0.088 0.912 38 H 0.117 0.883 39 H 0.089 0.911 40 H 0.084 0.916 41 H 0.104 0.896 42 H 0.081 0.919 43 H 0.103 0.897 44 H 0.139 0.861 45 H 0.257 0.743 46 H 0.207 0.793 47 H 0.201 0.799 48 H 0.129 0.871 49 H 0.247 0.753 50 H -0.206 1.206 51 H -0.223 1.223 52 H 0.157 0.843 53 H 0.144 0.856 54 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -1.673 0.512 -1.687 2.431 hybrid contribution 0.389 -1.122 0.511 1.293 sum -1.284 -0.610 -1.176 1.845 Atomic orbital electron populations 1.23515 0.74918 1.05480 1.02491 1.86508 1.24795 1.32929 1.83114 1.23861 0.91768 0.81577 0.71229 1.90670 1.66750 1.36989 1.46478 1.20835 0.83957 0.86708 1.00069 1.44076 1.55547 1.27279 1.06951 1.18153 0.78496 0.79519 0.83021 1.90942 1.41399 1.53816 1.60879 1.86323 1.65203 1.46607 1.29567 1.22380 0.96854 0.96934 0.74576 1.22455 0.94798 1.02617 1.03701 1.21898 0.99841 0.94850 1.02924 1.22478 1.01944 0.98094 1.01216 1.23722 0.97743 0.95140 0.99760 1.22337 0.97726 0.84195 0.92565 0.86157 1.45670 1.16731 1.15313 1.57311 1.18159 0.81837 0.86764 0.77370 1.90807 1.46871 1.47246 1.59513 1.20965 0.97690 0.95785 1.05807 1.23460 0.98594 0.86813 0.92304 1.67801 1.21654 1.21028 1.09740 1.23220 0.87550 0.99263 0.92390 1.21444 0.99056 0.94962 1.02500 1.25191 0.94943 1.09015 0.88983 1.86513 1.53346 1.66681 1.29588 0.93808 0.84321 0.70892 0.82442 1.21662 0.95439 0.96272 0.89255 1.23882 0.98055 1.01384 0.92783 0.85657 0.92728 0.91078 0.73304 0.91895 0.89551 0.91874 0.91160 0.88339 0.91095 0.91587 0.89568 0.91883 0.89694 0.86076 0.74334 0.79278 0.79922 0.87101 0.75271 1.20566 1.22287 0.84327 0.85643 0.86387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.02 10.56 113.37 1.20 1.22 16 2 O -0.36 -1.81 10.25 -51.34 -0.53 -2.33 16 3 C 0.47 2.50 6.38 71.24 0.45 2.96 16 4 O -0.52 -4.85 15.80 21.95 0.35 -4.50 16 5 C 0.17 -0.08 1.01 3.39 0.00 -0.08 16 6 N -0.68 0.33 4.91 -551.33 -2.71 -2.38 16 7 C 0.65 3.39 7.51 129.79 0.97 4.37 16 8 O -0.58 -5.85 10.63 19.79 0.21 -5.64 16 9 O -0.36 -1.52 9.94 -55.37 -0.55 -2.07 16 10 C 0.13 0.26 1.13 -10.79 -0.01 0.25 16 11 C -0.18 -0.46 8.37 71.98 0.60 0.15 16 12 C -0.14 0.36 8.85 71.99 0.64 1.00 16 13 C -0.18 -0.41 8.37 71.98 0.60 0.19 16 14 C -0.12 0.17 6.65 31.12 0.21 0.38 16 15 C 0.14 -0.50 4.15 45.52 0.19 -0.31 16 16 H 0.12 -0.13 7.46 -2.39 -0.02 -0.15 16 17 N -0.70 3.12 5.31 -442.91 -2.35 0.77 16 18 C 0.57 0.94 7.78 86.78 0.68 1.61 16 19 O -0.57 -5.29 16.02 -3.88 -0.06 -5.36 16 20 C -0.20 0.02 5.89 -19.99 -0.12 -0.10 16 21 C 0.15 -0.47 10.71 85.02 0.91 0.45 16 22 N -0.49 0.29 10.35 -194.76 -2.01 -1.73 16 23 C 0.13 -0.37 9.84 84.71 0.83 0.46 16 24 C -0.18 0.31 5.35 -19.81 -0.11 0.20 16 25 C -0.07 0.19 2.82 71.23 0.20 0.39 16 26 O -0.55 0.82 12.84 -148.98 -1.91 -1.09 16 27 Si 0.78 -3.94 29.83 68.60 2.05 -1.90 16 28 C 0.00 0.00 9.38 22.73 0.21 0.21 16 29 C -0.12 0.71 7.16 31.12 0.22 0.93 16 30 H 0.13 -0.55 8.14 -2.39 -0.02 -0.57 16 31 H 0.05 0.16 8.13 -2.39 -0.02 0.14 16 32 H 0.07 -0.04 8.13 -2.38 -0.02 -0.06 16 33 H 0.43 -2.30 8.77 -92.71 -0.81 -3.12 16 34 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 35 H 0.09 -0.06 8.14 -2.38 -0.02 -0.08 16 36 H 0.06 0.50 5.88 -2.39 -0.01 0.49 16 37 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 38 H 0.10 -0.56 8.14 -2.38 -0.02 -0.58 16 39 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 40 H 0.07 0.47 5.88 -2.39 -0.01 0.46 16 41 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 42 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 43 H 0.08 0.15 7.46 -2.39 -0.02 0.13 16 44 H 0.12 -0.23 7.36 -2.39 -0.02 -0.25 16 45 H 0.42 -4.06 6.79 -92.71 -0.63 -4.69 16 46 H 0.19 -1.92 6.42 -2.91 -0.02 -1.94 16 47 H 0.18 -1.47 4.91 -2.91 -0.01 -1.49 16 48 H 0.11 -0.14 7.96 -2.39 -0.02 -0.16 16 49 H 0.40 -3.94 8.70 -74.06 -0.64 -4.59 16 50 H -0.28 0.17 7.11 99.48 0.71 0.88 16 51 H -0.30 -0.84 7.11 99.48 0.71 -0.14 16 52 H 0.14 0.54 7.74 -2.91 -0.02 0.51 16 53 H 0.13 -0.90 8.09 -2.39 -0.02 -0.92 16 54 H 0.12 -1.03 8.09 -2.39 -0.02 -1.05 16 Total: 0.00 -28.55 444.94 -0.90 -29.44 By element: Atomic # 1 Polarization: -16.42 SS G_CDS: -1.06 Total: -17.48 kcal Atomic # 6 Polarization: 6.58 SS G_CDS: 7.69 Total: 14.27 kcal Atomic # 7 Polarization: 3.74 SS G_CDS: -7.08 Total: -3.34 kcal Atomic # 8 Polarization: -18.50 SS G_CDS: -2.49 Total: -20.99 kcal Atomic # 14 Polarization: -3.94 SS G_CDS: 2.05 Total: -1.90 kcal Total: -28.55 -0.90 -29.44 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13976896_13287814.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.163 kcal (2) G-P(sol) polarization free energy of solvation -28.547 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.709 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.897 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.443 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.606 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.00 seconds