Wall clock time and date at job start Sun Mar 7 2021 01:41:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34232 * 116.99878 * 2 1 4 4 O 1.20825 * 120.00049 * 0.02562 * 3 2 1 5 5 C 1.50695 * 119.99727 * 180.02562 * 3 2 1 6 6 N 1.46493 * 112.85226 * 23.80221 * 5 3 2 7 7 C 1.34776 * 120.00252 * 309.66965 * 6 5 3 8 8 O 1.21507 * 119.99754 * 359.97438 * 7 6 5 9 9 O 1.34639 * 120.00301 * 180.02562 * 7 6 5 10 10 C 1.45201 * 117.00090 * 179.97438 * 9 7 6 11 11 C 1.53003 * 109.46902 * 59.99714 * 10 9 7 12 12 C 1.52997 * 109.47046 * 179.97438 * 10 9 7 13 13 C 1.53000 * 109.46964 * 299.99792 * 10 9 7 14 14 C 1.53785 * 113.61177 * 252.49563 * 5 3 2 15 15 C 1.53787 * 87.08259 * 220.02039 * 14 5 3 16 16 H 1.09002 * 113.61252 * 270.88985 * 15 14 5 17 17 N 1.46498 * 113.61568 * 139.97990 * 15 14 5 18 18 C 1.34774 * 119.99919 * 107.50131 * 17 15 14 19 19 O 1.21659 * 120.00081 * 0.02562 * 18 17 15 20 20 C 1.47043 * 120.00092 * 179.97438 * 18 17 15 21 21 C 1.36224 * 123.49032 * 179.70242 * 20 18 17 22 22 Cl 1.73602 * 124.60989 * 0.03335 * 21 20 18 23 23 S 1.70445 * 110.78746 * 179.89370 * 21 20 18 24 24 C 1.75494 * 92.46677 * 0.32402 * 23 21 20 25 25 C 1.50695 * 124.68614 * 179.85735 * 24 23 21 26 26 O 1.42899 * 109.47434 * 119.95906 * 25 24 23 27 27 Si 1.86303 * 109.47087 * 359.95262 * 25 24 23 28 28 C 1.32695 * 110.62788 * 359.81584 * 24 23 21 29 29 C 1.53780 * 113.61432 * 155.00171 * 5 3 2 30 30 H 1.09001 * 109.47157 * 179.97438 * 1 2 3 31 31 H 1.09004 * 109.47122 * 299.99817 * 1 2 3 32 32 H 1.09000 * 109.47070 * 59.99842 * 1 2 3 33 33 H 0.97004 * 120.00164 * 129.66439 * 6 5 3 34 34 H 1.09000 * 109.47153 * 60.00039 * 11 10 9 35 35 H 1.09005 * 109.46661 * 179.97438 * 11 10 9 36 36 H 1.08995 * 109.46974 * 300.00077 * 11 10 9 37 37 H 1.09007 * 109.47397 * 59.99856 * 12 10 9 38 38 H 1.08996 * 109.47212 * 179.97438 * 12 10 9 39 39 H 1.09000 * 109.47221 * 300.00091 * 12 10 9 40 40 H 1.09000 * 109.47089 * 60.00143 * 13 10 9 41 41 H 1.08996 * 109.46933 * 180.02562 * 13 10 9 42 42 H 1.08997 * 109.46925 * 299.99812 * 13 10 9 43 43 H 1.08994 * 113.61623 * 334.57112 * 14 5 3 44 44 H 1.09001 * 113.61323 * 105.47487 * 14 5 3 45 45 H 0.96995 * 120.00105 * 287.50882 * 17 15 14 46 46 H 1.09008 * 109.47163 * 239.95872 * 25 24 23 47 47 H 0.96696 * 113.99732 * 299.99538 * 26 25 24 48 48 H 1.48504 * 109.99565 * 180.02562 * 27 25 24 49 49 H 1.48493 * 110.00325 * 301.32267 * 27 25 24 50 50 H 1.07998 * 123.45029 * 180.02562 * 28 24 23 51 51 H 1.08999 * 113.61775 * 254.52786 * 29 5 3 52 52 H 1.09009 * 113.61544 * 25.34727 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1988 0.0713 -0.5459 7 6 3.8373 -1.1449 -0.0914 8 8 2.9870 -1.2431 0.7710 9 8 4.4190 -2.2511 -0.5922 10 6 3.9807 -3.5270 -0.0554 11 6 2.4819 -3.6995 -0.3098 12 6 4.7476 -4.6594 -0.7412 13 6 4.2503 -3.5665 1.4502 14 6 4.1598 1.7301 1.3431 15 6 5.1637 2.5625 0.5281 16 1 6.0720 2.0190 0.2679 17 7 5.4338 3.8830 1.1023 18 6 6.6179 4.1299 1.6967 19 8 7.4626 3.2564 1.7562 20 6 6.8893 5.4554 2.2725 21 6 8.0573 5.7802 2.8938 22 17 9.3974 4.6966 3.1031 23 16 8.0258 7.3963 3.4344 24 6 6.4004 7.6489 2.8229 25 6 5.6314 8.9397 2.9387 26 8 5.3075 9.4202 1.6325 27 14 6.6722 10.2051 3.8256 28 6 5.9423 6.5464 2.2435 29 6 4.1144 2.5825 -0.5960 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5139 -0.8900 33 1 4.8779 0.1496 -1.2342 34 1 2.2898 -3.6713 -1.3824 35 1 2.1530 -4.6576 0.0928 36 1 1.9353 -2.8928 0.1785 37 1 5.8155 -4.5366 -0.5604 38 1 4.4190 -5.6172 -0.3379 39 1 4.5552 -4.6310 -1.8137 40 1 3.7036 -2.7598 1.9385 41 1 3.9217 -4.5245 1.8531 42 1 5.3180 -3.4436 1.6314 43 1 3.4761 2.3329 1.9406 44 1 4.6219 0.9233 1.9120 45 1 4.7605 4.5795 1.0547 46 1 4.7132 8.7665 3.5002 47 1 6.0784 9.5963 1.0759 48 1 5.9247 11.4825 3.9468 49 1 7.0423 9.7038 5.1735 50 1 4.9623 6.4723 1.7959 51 1 4.5399 2.4640 -1.5925 52 1 3.4177 3.4182 -0.5299 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13976896_13431040.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:41:35 Heat of formation + Delta-G solvation = -153.674621 kcal Electronic energy + Delta-G solvation = -41054.055628 eV Core-core repulsion = 35561.332002 eV Total energy + Delta-G solvation = -5492.723625 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 447.109 amu Computer time = 1.75 seconds Orbital eigenvalues (eV) -42.68631 -41.44214 -41.08246 -39.88147 -38.82282 -38.09193 -37.93742 -37.26230 -36.92358 -35.58784 -34.92713 -33.30367 -31.62326 -29.30177 -28.33121 -28.26822 -27.43377 -27.21471 -26.80431 -25.44537 -23.99008 -22.55618 -22.12808 -21.20256 -20.83931 -20.46524 -19.43399 -19.30960 -19.18683 -18.11853 -17.87751 -17.75952 -17.54961 -17.20086 -16.98832 -16.74728 -16.59375 -16.35113 -16.04528 -15.71245 -15.62239 -15.55395 -15.27998 -14.82928 -14.75506 -14.65226 -14.42557 -14.36513 -14.27620 -14.05084 -13.82948 -13.73373 -13.53649 -13.31050 -13.12342 -13.05163 -12.89343 -12.87428 -12.81615 -12.58212 -12.55597 -12.45955 -12.39808 -12.26703 -12.13499 -12.10313 -11.85777 -11.77913 -11.71542 -11.29889 -10.98742 -10.95300 -10.59061 -10.45670 -10.22075 -9.88136 -9.65320 -5.12732 -0.62777 -0.18850 0.48623 0.71284 0.79581 1.04730 1.11940 1.19757 1.56513 1.59146 1.83484 1.90940 2.12950 2.17051 2.87770 2.92473 3.16131 3.28779 3.48100 3.60458 3.63232 3.77789 3.80472 3.82963 3.89507 3.97285 4.03777 4.20264 4.26447 4.29406 4.36172 4.45439 4.47597 4.56183 4.59175 4.63499 4.65058 4.71087 4.73849 4.78702 4.79832 4.82592 4.89208 4.90723 4.97548 5.04085 5.18251 5.30105 5.31193 5.36953 5.39559 5.56148 6.30294 6.39524 6.59674 6.72203 7.08792 7.35711 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.323 6.323 3 C 0.467 3.533 4 O -0.525 6.525 5 C 0.175 3.825 6 N -0.683 5.683 7 C 0.643 3.357 8 O -0.545 6.545 9 O -0.368 6.368 10 C 0.131 3.869 11 C -0.178 4.178 12 C -0.139 4.139 13 C -0.179 4.179 14 C -0.141 4.141 15 C 0.140 3.860 16 H 0.123 0.877 17 N -0.698 5.698 18 C 0.575 3.425 19 O -0.553 6.553 20 C -0.167 4.167 21 C -0.138 4.138 22 Cl 0.004 6.996 23 S 0.264 5.736 24 C -0.229 4.229 25 C -0.019 4.019 26 O -0.542 6.542 27 Si 0.712 3.288 28 C -0.068 4.068 29 C -0.111 4.111 30 H 0.114 0.886 31 H 0.057 0.943 32 H 0.062 0.938 33 H 0.426 0.574 34 H 0.059 0.941 35 H 0.082 0.918 36 H 0.072 0.928 37 H 0.067 0.933 38 H 0.097 0.903 39 H 0.069 0.931 40 H 0.066 0.934 41 H 0.084 0.916 42 H 0.058 0.942 43 H 0.104 0.896 44 H 0.077 0.923 45 H 0.417 0.583 46 H 0.133 0.867 47 H 0.399 0.601 48 H -0.267 1.267 49 H -0.261 1.261 50 H 0.180 0.820 51 H 0.124 0.876 52 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.840 2.923 -3.513 4.647 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.237 6.237 3 C 0.309 3.691 4 O -0.415 6.415 5 C 0.086 3.914 6 N -0.346 5.346 7 C 0.397 3.603 8 O -0.432 6.432 9 O -0.283 6.283 10 C 0.094 3.906 11 C -0.235 4.235 12 C -0.196 4.196 13 C -0.236 4.236 14 C -0.181 4.181 15 C 0.034 3.966 16 H 0.140 0.860 17 N -0.350 5.350 18 C 0.362 3.638 19 O -0.432 6.432 20 C -0.187 4.187 21 C -0.284 4.284 22 Cl 0.033 6.967 23 S 0.530 5.470 24 C -0.347 4.347 25 C -0.133 4.133 26 O -0.351 6.351 27 Si 0.615 3.385 28 C -0.096 4.096 29 C -0.149 4.149 30 H 0.132 0.868 31 H 0.076 0.924 32 H 0.081 0.919 33 H 0.265 0.735 34 H 0.078 0.922 35 H 0.101 0.899 36 H 0.091 0.909 37 H 0.086 0.914 38 H 0.115 0.885 39 H 0.088 0.912 40 H 0.085 0.915 41 H 0.103 0.897 42 H 0.077 0.923 43 H 0.123 0.877 44 H 0.096 0.904 45 H 0.255 0.745 46 H 0.150 0.850 47 H 0.249 0.751 48 H -0.192 1.192 49 H -0.187 1.187 50 H 0.197 0.803 51 H 0.143 0.857 52 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.423 3.696 -1.348 4.184 hybrid contribution -1.597 -1.402 -0.653 2.223 sum -0.174 2.294 -2.001 3.049 Atomic orbital electron populations 1.23431 0.76724 1.04678 1.02073 1.87010 1.23223 1.31397 1.82039 1.23832 0.91660 0.81949 0.71635 1.90671 1.66746 1.37043 1.47037 1.20813 0.84418 0.86564 0.99607 1.44118 1.44830 1.01112 1.44565 1.18160 0.79864 0.81727 0.80570 1.90962 1.33238 1.85984 1.33027 1.86302 1.63333 1.14793 1.63844 1.22308 0.95459 0.78799 0.93990 1.22456 0.94505 1.04138 1.02411 1.21890 1.00559 0.95721 1.01382 1.22458 1.02234 1.04259 0.94663 1.23926 0.98651 1.00478 0.95069 1.22321 0.97648 0.83797 0.92833 0.85953 1.45591 1.16637 1.14688 1.58093 1.17666 0.82139 0.86394 0.77639 1.90870 1.46605 1.47097 1.58662 1.20293 0.94731 0.96545 1.07105 1.25793 0.95175 1.00699 1.06778 1.98429 1.41003 1.62003 1.95248 1.83271 1.11027 0.99115 1.53626 1.24940 0.99046 1.01934 1.08736 1.24420 1.03291 0.93989 0.91586 1.86519 1.37900 1.86343 1.24289 0.94330 0.85093 0.77898 0.81198 1.21137 1.00187 0.89009 0.99312 1.23748 0.97240 0.93183 1.00738 0.86790 0.92397 0.91908 0.73464 0.92177 0.89893 0.90943 0.91396 0.88484 0.91180 0.91491 0.89727 0.92311 0.87744 0.90431 0.74503 0.85041 0.75073 1.19215 1.18679 0.80317 0.85731 0.85230 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.08 10.56 113.37 1.20 1.28 16 2 O -0.32 -2.41 6.34 -43.47 -0.28 -2.68 16 3 C 0.47 2.79 7.04 71.23 0.50 3.29 16 4 O -0.53 -4.69 15.81 21.97 0.35 -4.34 16 5 C 0.18 -0.01 1.11 3.38 0.00 -0.01 16 6 N -0.68 0.23 5.22 -551.35 -2.88 -2.64 16 7 C 0.64 3.43 7.38 129.79 0.96 4.38 16 8 O -0.55 -5.07 8.46 27.82 0.24 -4.84 16 9 O -0.37 -1.69 9.94 -55.48 -0.55 -2.24 16 10 C 0.13 0.31 1.13 -10.79 -0.01 0.29 16 11 C -0.18 -0.38 8.37 71.98 0.60 0.22 16 12 C -0.14 0.27 8.85 71.98 0.64 0.91 16 13 C -0.18 -0.54 8.37 71.98 0.60 0.07 16 14 C -0.14 -0.06 7.22 31.12 0.22 0.16 16 15 C 0.14 -0.41 4.15 45.52 0.19 -0.22 16 16 H 0.12 -0.12 7.47 -2.39 -0.02 -0.14 16 17 N -0.70 2.01 5.33 -443.64 -2.37 -0.35 16 18 C 0.58 2.18 7.79 86.55 0.67 2.85 16 19 O -0.55 -6.16 14.51 -4.22 -0.06 -6.22 16 20 C -0.17 -0.21 5.98 -19.84 -0.12 -0.33 16 21 C -0.14 -0.38 6.87 67.35 0.46 0.08 16 22 Cl 0.00 0.03 27.20 -2.72 -0.07 -0.05 16 23 S 0.26 -0.81 20.17 -56.49 -1.14 -1.95 16 24 C -0.23 1.16 5.68 24.51 0.14 1.30 16 25 C -0.02 0.13 2.94 71.23 0.21 0.34 16 26 O -0.54 3.45 12.85 -148.98 -1.91 1.53 16 27 Si 0.71 -4.15 30.91 68.60 2.12 -2.03 16 28 C -0.07 0.30 9.71 22.70 0.22 0.52 16 29 C -0.11 0.68 6.98 31.12 0.22 0.90 16 30 H 0.11 -0.05 8.14 -2.39 -0.02 -0.07 16 31 H 0.06 0.22 8.13 -2.38 -0.02 0.20 16 32 H 0.06 0.14 8.13 -2.39 -0.02 0.12 16 33 H 0.43 -2.39 8.74 -92.71 -0.81 -3.20 16 34 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 35 H 0.08 -0.07 8.14 -2.38 -0.02 -0.09 16 36 H 0.07 0.48 5.88 -2.39 -0.01 0.47 16 37 H 0.07 -0.12 8.14 -2.38 -0.02 -0.14 16 38 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 39 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 40 H 0.07 0.52 5.88 -2.39 -0.01 0.50 16 41 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 42 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 43 H 0.10 0.06 8.09 -2.39 -0.02 0.04 16 44 H 0.08 0.32 8.14 -2.39 -0.02 0.30 16 45 H 0.42 -3.36 7.27 -92.71 -0.67 -4.04 16 46 H 0.13 -0.90 7.96 -2.38 -0.02 -0.92 16 47 H 0.40 -5.51 8.70 -74.06 -0.64 -6.15 16 48 H -0.27 -0.21 7.11 99.48 0.71 0.50 16 49 H -0.26 0.33 7.11 99.48 0.71 1.04 16 50 H 0.18 -1.65 7.10 -2.91 -0.02 -1.67 16 51 H 0.12 -1.34 8.11 -2.39 -0.02 -1.36 16 52 H 0.13 -0.86 7.37 -2.38 -0.02 -0.87 16 Total: 0.00 -24.80 453.21 -0.92 -25.71 By element: Atomic # 1 Polarization: -14.86 SS G_CDS: -1.07 Total: -15.93 kcal Atomic # 6 Polarization: 9.33 SS G_CDS: 6.71 Total: 16.04 kcal Atomic # 7 Polarization: 2.24 SS G_CDS: -5.24 Total: -3.00 kcal Atomic # 8 Polarization: -16.57 SS G_CDS: -2.22 Total: -18.79 kcal Atomic # 14 Polarization: -4.15 SS G_CDS: 2.12 Total: -2.03 kcal Atomic # 16 Polarization: -0.81 SS G_CDS: -1.14 Total: -1.95 kcal Atomic # 17 Polarization: 0.03 SS G_CDS: -0.07 Total: -0.05 kcal Total: -24.80 -0.92 -25.71 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13976896_13431040.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.960 kcal (2) G-P(sol) polarization free energy of solvation -24.799 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.758 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.916 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.715 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.675 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.75 seconds