Wall clock time and date at job start Sun Mar 7 2021 01:41:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34232 * 116.99818 * 2 1 4 4 O 1.20816 * 120.00190 * 359.97438 * 3 2 1 5 5 C 1.50701 * 119.99563 * 180.02562 * 3 2 1 6 6 N 1.46503 * 112.85583 * 35.51391 * 5 3 2 7 7 C 1.34776 * 119.99771 * 66.99714 * 6 5 3 8 8 O 1.21518 * 120.00103 * 354.94800 * 7 6 5 9 9 O 1.34638 * 119.99985 * 175.23044 * 7 6 5 10 10 C 1.45199 * 117.00007 * 179.72248 * 9 7 6 11 11 C 1.53003 * 109.46838 * 59.99866 * 10 9 7 12 12 C 1.53000 * 109.46835 * 179.97438 * 10 9 7 13 13 C 1.52997 * 109.47303 * 299.99867 * 10 9 7 14 14 C 1.53781 * 113.68943 * 264.23983 * 5 3 2 15 15 C 1.53775 * 87.08405 * 220.01101 * 14 5 3 16 16 H 1.09001 * 113.69611 * 270.87573 * 15 14 5 17 17 N 1.46498 * 113.61736 * 139.98485 * 15 14 5 18 18 C 1.34769 * 120.00525 * 107.50035 * 17 15 14 19 19 O 1.21617 * 120.00082 * 0.02562 * 18 17 15 20 20 C 1.47383 * 120.00527 * 180.02562 * 18 17 15 21 21 C 1.36418 * 127.18779 * 0.02562 * 20 18 17 22 22 O 1.33650 * 108.39321 * 179.97438 * 21 20 18 23 23 C 1.34214 * 110.91021 * 0.02562 * 22 21 20 24 24 C 1.50708 * 125.43615 * 179.97438 * 23 22 21 25 25 O 1.42893 * 109.46829 * 244.97278 * 24 23 22 26 26 Si 1.86304 * 109.46999 * 4.97173 * 24 23 22 27 27 C 1.34179 * 109.12549 * 359.74240 * 23 22 21 28 28 C 1.53781 * 87.08010 * 25.43503 * 15 14 5 29 29 H 1.08995 * 109.46833 * 299.99961 * 1 2 3 30 30 H 1.09001 * 109.47107 * 60.00050 * 1 2 3 31 31 H 1.08998 * 109.47336 * 179.97438 * 1 2 3 32 32 H 0.96993 * 119.99742 * 247.00451 * 6 5 3 33 33 H 1.09001 * 109.47115 * 59.99800 * 11 10 9 34 34 H 1.09003 * 109.46837 * 179.97438 * 11 10 9 35 35 H 1.08991 * 109.47382 * 299.99361 * 11 10 9 36 36 H 1.08992 * 109.47458 * 59.99953 * 12 10 9 37 37 H 1.09001 * 109.46884 * 180.02562 * 12 10 9 38 38 H 1.09007 * 109.46846 * 299.99631 * 12 10 9 39 39 H 1.09004 * 109.47094 * 59.99809 * 13 10 9 40 40 H 1.08998 * 109.47249 * 180.02562 * 13 10 9 41 41 H 1.08998 * 109.46993 * 300.00246 * 13 10 9 42 42 H 1.08997 * 113.61628 * 334.56541 * 14 5 3 43 43 H 1.09006 * 113.61101 * 105.46390 * 14 5 3 44 44 H 0.97008 * 119.99617 * 287.50957 * 17 15 14 45 45 H 1.07992 * 125.80214 * 359.97159 * 21 20 18 46 46 H 1.08999 * 109.46815 * 124.96896 * 24 23 22 47 47 H 0.96696 * 114.00436 * 59.99808 * 25 24 23 48 48 H 1.48495 * 109.99621 * 180.02562 * 26 24 23 49 49 H 1.48498 * 109.99939 * 301.31802 * 26 24 23 50 50 H 1.08000 * 127.02232 * 180.26809 * 27 23 22 51 51 H 1.08997 * 113.61192 * 220.01514 * 28 15 14 52 52 H 1.08998 * 113.61415 * 89.11401 * 28 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 7 4.1917 0.2074 -0.7853 7 6 4.0341 0.1739 -2.1234 8 8 3.2996 0.9736 -2.6689 9 8 4.6861 -0.7493 -2.8551 10 6 4.4641 -0.7302 -4.2899 11 6 4.8980 0.6238 -4.8550 12 6 5.2830 -1.8428 -4.9474 13 6 2.9781 -0.9510 -4.5791 14 6 4.1765 1.4480 1.4003 15 6 5.1720 2.4293 0.7595 16 1 6.0768 1.9521 0.3832 17 7 5.4513 3.6058 1.5867 18 6 6.6428 3.7276 2.2047 19 8 7.4863 2.8611 2.0753 20 6 6.9236 4.9109 3.0373 21 6 6.0906 5.9630 3.2825 22 8 6.7238 6.8239 4.0851 23 6 7.9551 6.3823 4.3852 24 6 8.9493 7.0961 5.2646 25 8 10.0840 7.4806 4.4858 26 14 8.1543 8.6144 5.9952 27 6 8.1579 5.2013 3.7813 28 6 4.1096 2.6766 -0.3244 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 4.7190 -0.4752 -0.3417 33 1 5.9567 0.7811 -4.6490 34 1 4.7318 0.6380 -5.9322 35 1 4.3150 1.4167 -4.3867 36 1 4.9744 -2.8075 -4.5448 37 1 5.1167 -1.8282 -6.0246 38 1 6.3417 -1.6850 -4.7414 39 1 2.3950 -0.1580 -4.1106 40 1 2.8115 -0.9371 -5.6562 41 1 2.6690 -1.9156 -4.1764 42 1 3.5009 1.9164 2.1160 43 1 4.6439 0.5427 1.7879 44 1 4.7786 4.2970 1.6897 45 1 5.0898 6.0803 2.8942 46 1 9.2678 6.4309 6.0671 47 1 9.8745 8.0742 3.7518 48 1 9.1246 9.3276 6.8640 49 1 7.6870 9.5148 4.9107 50 1 9.0468 4.5899 3.8305 51 1 4.5230 2.7633 -1.3292 52 1 3.4157 3.4809 -0.0802 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13976896_13456056.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:41:41 Heat of formation + Delta-G solvation = -170.174228 kcal Electronic energy + Delta-G solvation = -38518.880757 eV Core-core repulsion = 33261.170768 eV Total energy + Delta-G solvation = -5257.709989 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.175 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -43.77193 -42.68107 -41.43234 -40.74449 -39.54831 -38.18114 -37.91288 -37.34009 -35.63083 -34.98746 -34.08735 -33.27728 -31.76212 -29.33281 -28.34321 -28.31000 -27.37241 -27.23356 -26.57741 -24.92587 -23.94141 -22.45481 -22.32507 -21.27701 -21.10739 -20.54003 -19.44089 -19.30411 -19.10497 -18.13200 -17.87210 -17.58818 -17.47005 -17.45522 -17.31119 -17.03027 -16.71711 -16.58062 -16.13747 -15.97597 -15.69731 -15.58290 -15.32930 -14.93022 -14.80298 -14.46675 -14.35726 -14.20245 -13.96836 -13.89009 -13.82003 -13.62999 -13.54623 -13.40683 -13.15716 -13.07329 -12.98621 -12.88322 -12.85078 -12.62826 -12.46367 -12.31906 -12.14902 -12.10754 -11.78610 -11.72575 -11.33599 -11.16780 -11.03769 -10.94857 -10.79645 -10.47725 -10.27252 -9.87160 -5.03153 0.16720 0.79967 0.84081 1.08609 1.14960 1.42848 1.46932 1.68004 1.79092 1.89349 2.04014 2.23729 2.83462 2.92854 3.01119 3.10029 3.29601 3.35606 3.51319 3.60761 3.74843 3.81015 3.83349 3.93868 3.95288 4.14943 4.21632 4.23120 4.24807 4.30950 4.33571 4.43311 4.53334 4.54733 4.57577 4.61496 4.61834 4.67192 4.72571 4.75091 4.77101 4.86317 4.91221 4.99535 5.09527 5.16530 5.27008 5.33173 5.34411 5.39501 5.50562 5.77807 6.19530 6.21413 6.30480 6.65694 7.08602 7.28142 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.350 6.350 3 C 0.476 3.524 4 O -0.493 6.493 5 C 0.179 3.821 6 N -0.687 5.687 7 C 0.657 3.343 8 O -0.556 6.556 9 O -0.358 6.358 10 C 0.137 3.863 11 C -0.185 4.185 12 C -0.142 4.142 13 C -0.184 4.184 14 C -0.137 4.137 15 C 0.132 3.868 16 H 0.128 0.872 17 N -0.717 5.717 18 C 0.592 3.408 19 O -0.527 6.527 20 C -0.240 4.240 21 C 0.035 3.965 22 O -0.165 6.165 23 C -0.056 4.056 24 C -0.035 4.035 25 O -0.520 6.520 26 Si 0.704 3.296 27 C -0.121 4.121 28 C -0.128 4.128 29 H 0.065 0.935 30 H 0.064 0.936 31 H 0.103 0.897 32 H 0.417 0.583 33 H 0.061 0.939 34 H 0.073 0.927 35 H 0.087 0.913 36 H 0.068 0.932 37 H 0.083 0.917 38 H 0.068 0.932 39 H 0.086 0.914 40 H 0.072 0.928 41 H 0.061 0.939 42 H 0.113 0.887 43 H 0.101 0.899 44 H 0.402 0.598 45 H 0.215 0.785 46 H 0.138 0.862 47 H 0.381 0.619 48 H -0.249 1.249 49 H -0.256 1.256 50 H 0.163 0.837 51 H 0.097 0.903 52 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.777 -0.663 1.955 3.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.266 6.266 3 C 0.316 3.684 4 O -0.378 6.378 5 C 0.089 3.911 6 N -0.349 5.349 7 C 0.411 3.589 8 O -0.444 6.444 9 O -0.273 6.273 10 C 0.101 3.899 11 C -0.242 4.242 12 C -0.199 4.199 13 C -0.241 4.241 14 C -0.176 4.176 15 C 0.027 3.973 16 H 0.146 0.854 17 N -0.368 5.368 18 C 0.380 3.620 19 O -0.404 6.404 20 C -0.244 4.244 21 C -0.036 4.036 22 O -0.061 6.061 23 C -0.105 4.105 24 C -0.145 4.145 25 O -0.327 6.327 26 Si 0.603 3.397 27 C -0.141 4.141 28 C -0.167 4.167 29 H 0.083 0.917 30 H 0.083 0.917 31 H 0.121 0.879 32 H 0.254 0.746 33 H 0.080 0.920 34 H 0.091 0.909 35 H 0.106 0.894 36 H 0.087 0.913 37 H 0.101 0.899 38 H 0.087 0.913 39 H 0.105 0.895 40 H 0.091 0.909 41 H 0.080 0.920 42 H 0.132 0.868 43 H 0.119 0.881 44 H 0.237 0.763 45 H 0.231 0.769 46 H 0.156 0.844 47 H 0.229 0.771 48 H -0.173 1.173 49 H -0.180 1.180 50 H 0.180 0.820 51 H 0.116 0.884 52 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -2.486 0.142 2.091 3.251 hybrid contribution 0.008 -0.173 -1.156 1.168 sum -2.478 -0.030 0.935 2.649 Atomic orbital electron populations 1.23336 0.75803 1.04025 1.02753 1.86515 1.23763 1.32875 1.83463 1.23394 0.90883 0.81873 0.72228 1.90682 1.66043 1.36367 1.44744 1.20712 0.85294 0.89877 0.95187 1.44136 1.56231 1.30743 1.03781 1.17987 0.78713 0.79945 0.82267 1.90963 1.40219 1.42444 1.70774 1.86321 1.65668 1.52954 1.22348 1.22167 0.96541 0.97151 0.74075 1.22531 1.02347 0.97126 1.02175 1.21883 1.00306 0.97293 1.00430 1.22516 0.94895 1.03557 1.03127 1.23870 0.98596 1.02132 0.93015 1.22426 0.98012 0.86309 0.90558 0.85380 1.45723 1.16687 1.23910 1.50524 1.17295 0.81492 0.84826 0.78398 1.90827 1.45886 1.41717 1.61946 1.21480 0.97200 0.98209 1.07542 1.24503 0.98062 0.88304 0.92725 1.83701 1.25201 1.44497 1.52715 1.22688 0.85676 0.97062 1.05042 1.24400 0.86990 1.08414 0.94655 1.86679 1.30740 1.68601 1.46654 0.94460 0.84933 0.76117 0.84200 1.22542 0.98179 0.95929 0.97461 1.23738 0.97393 0.94355 1.01206 0.91651 0.91673 0.87865 0.74565 0.91999 0.90856 0.89448 0.91305 0.89870 0.91292 0.89531 0.90874 0.92024 0.86839 0.88074 0.76275 0.76906 0.84422 0.77089 1.17337 1.18006 0.81985 0.88435 0.86462 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.07 16 2 O -0.35 -0.73 10.41 -39.26 -0.41 -1.14 16 3 C 0.48 1.13 6.42 36.01 0.23 1.37 16 4 O -0.49 -2.20 15.66 -18.74 -0.29 -2.49 16 5 C 0.18 -0.05 1.00 -132.15 -0.13 -0.18 16 6 N -0.69 0.19 5.02 -52.78 -0.26 -0.08 16 7 C 0.66 1.51 7.54 54.05 0.41 1.92 16 8 O -0.56 -2.49 10.60 -19.29 -0.20 -2.69 16 9 O -0.36 -0.70 9.94 -40.32 -0.40 -1.10 16 10 C 0.14 0.14 1.13 -90.62 -0.10 0.03 16 11 C -0.18 -0.18 8.37 37.16 0.31 0.13 16 12 C -0.14 0.13 8.85 37.16 0.33 0.46 16 13 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 14 C -0.14 0.34 7.16 -25.92 -0.19 0.15 16 15 C 0.13 -0.20 4.15 -67.12 -0.28 -0.48 16 16 H 0.13 -0.03 7.46 -51.93 -0.39 -0.42 16 17 N -0.72 1.35 5.35 -54.11 -0.29 1.06 16 18 C 0.59 0.83 7.81 -12.54 -0.10 0.73 16 19 O -0.53 -2.85 16.58 5.26 0.09 -2.76 16 20 C -0.24 -0.08 6.31 -103.27 -0.65 -0.73 16 21 C 0.03 -0.08 11.61 30.08 0.35 0.27 16 22 O -0.17 0.15 8.90 7.66 0.07 0.22 16 23 C -0.06 0.01 6.18 -35.73 -0.22 -0.21 16 24 C -0.04 0.04 2.97 36.01 0.11 0.15 16 25 O -0.52 -0.15 12.88 -35.23 -0.45 -0.61 16 26 Si 0.70 -1.23 32.09 -169.99 -5.46 -6.68 16 27 C -0.12 -0.15 10.90 -37.46 -0.41 -0.56 16 28 C -0.13 0.10 6.59 -25.92 -0.17 -0.07 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.06 0.05 8.13 -51.93 -0.42 -0.37 16 31 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.42 -1.03 8.78 -40.82 -0.36 -1.39 16 33 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.09 0.25 5.88 -51.93 -0.31 -0.05 16 36 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.07 -0.07 8.14 -51.92 -0.42 -0.49 16 39 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 40 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 41 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 42 H 0.11 -0.36 8.10 -51.93 -0.42 -0.78 16 43 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 44 H 0.40 -1.90 7.70 -40.82 -0.31 -2.21 16 45 H 0.21 -1.46 7.47 -52.49 -0.39 -1.86 16 46 H 0.14 -0.34 7.96 -51.93 -0.41 -0.76 16 47 H 0.38 -0.96 8.70 45.56 0.40 -0.56 16 48 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 49 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 50 H 0.16 0.27 8.06 -52.49 -0.42 -0.15 16 51 H 0.10 0.05 7.41 -51.93 -0.38 -0.33 16 52 H 0.12 -0.13 7.32 -51.93 -0.38 -0.51 16 LS Contribution 437.80 15.07 6.60 6.60 Total: 0.00 -12.00 437.80 -7.69 -19.69 By element: Atomic # 1 Polarization: -6.63 SS G_CDS: -7.53 Total: -14.16 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: 0.86 Total: 4.15 kcal Atomic # 7 Polarization: 1.54 SS G_CDS: -0.55 Total: 0.99 kcal Atomic # 8 Polarization: -8.96 SS G_CDS: -1.61 Total: -10.57 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.46 Total: -6.68 kcal Total LS contribution 6.60 Total: 6.60 kcal Total: -12.00 -7.69 -19.69 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13976896_13456056.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -150.488 kcal (2) G-P(sol) polarization free energy of solvation -11.999 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -162.487 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.687 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.686 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.174 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds