Wall clock time and date at job start Sun Mar 7 2021 01:41:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34232 * 116.99818 * 2 1 4 4 O 1.20816 * 120.00190 * 359.97438 * 3 2 1 5 5 C 1.50701 * 119.99563 * 180.02562 * 3 2 1 6 6 N 1.46503 * 112.85583 * 35.51391 * 5 3 2 7 7 C 1.34776 * 119.99771 * 66.99714 * 6 5 3 8 8 O 1.21518 * 120.00103 * 354.94800 * 7 6 5 9 9 O 1.34638 * 119.99985 * 175.23044 * 7 6 5 10 10 C 1.45199 * 117.00007 * 179.72248 * 9 7 6 11 11 C 1.53003 * 109.46838 * 59.99866 * 10 9 7 12 12 C 1.53000 * 109.46835 * 179.97438 * 10 9 7 13 13 C 1.52997 * 109.47303 * 299.99867 * 10 9 7 14 14 C 1.53781 * 113.68943 * 264.23983 * 5 3 2 15 15 C 1.53775 * 87.08405 * 220.01101 * 14 5 3 16 16 H 1.09001 * 113.69611 * 270.87573 * 15 14 5 17 17 N 1.46498 * 113.61736 * 139.98485 * 15 14 5 18 18 C 1.34769 * 120.00525 * 107.50035 * 17 15 14 19 19 O 1.21617 * 120.00082 * 0.02562 * 18 17 15 20 20 C 1.47383 * 120.00527 * 180.02562 * 18 17 15 21 21 C 1.36418 * 127.18779 * 0.02562 * 20 18 17 22 22 O 1.33650 * 108.39321 * 179.97438 * 21 20 18 23 23 C 1.34214 * 110.91021 * 0.02562 * 22 21 20 24 24 C 1.50708 * 125.43615 * 179.97438 * 23 22 21 25 25 O 1.42893 * 109.46829 * 244.97278 * 24 23 22 26 26 Si 1.86304 * 109.46999 * 4.97173 * 24 23 22 27 27 C 1.34179 * 109.12549 * 359.74240 * 23 22 21 28 28 C 1.53781 * 87.08010 * 25.43503 * 15 14 5 29 29 H 1.08995 * 109.46833 * 299.99961 * 1 2 3 30 30 H 1.09001 * 109.47107 * 60.00050 * 1 2 3 31 31 H 1.08998 * 109.47336 * 179.97438 * 1 2 3 32 32 H 0.96993 * 119.99742 * 247.00451 * 6 5 3 33 33 H 1.09001 * 109.47115 * 59.99800 * 11 10 9 34 34 H 1.09003 * 109.46837 * 179.97438 * 11 10 9 35 35 H 1.08991 * 109.47382 * 299.99361 * 11 10 9 36 36 H 1.08992 * 109.47458 * 59.99953 * 12 10 9 37 37 H 1.09001 * 109.46884 * 180.02562 * 12 10 9 38 38 H 1.09007 * 109.46846 * 299.99631 * 12 10 9 39 39 H 1.09004 * 109.47094 * 59.99809 * 13 10 9 40 40 H 1.08998 * 109.47249 * 180.02562 * 13 10 9 41 41 H 1.08998 * 109.46993 * 300.00246 * 13 10 9 42 42 H 1.08997 * 113.61628 * 334.56541 * 14 5 3 43 43 H 1.09006 * 113.61101 * 105.46390 * 14 5 3 44 44 H 0.97008 * 119.99617 * 287.50957 * 17 15 14 45 45 H 1.07992 * 125.80214 * 359.97159 * 21 20 18 46 46 H 1.08999 * 109.46815 * 124.96896 * 24 23 22 47 47 H 0.96696 * 114.00436 * 59.99808 * 25 24 23 48 48 H 1.48495 * 109.99621 * 180.02562 * 26 24 23 49 49 H 1.48498 * 109.99939 * 301.31802 * 26 24 23 50 50 H 1.08000 * 127.02232 * 180.26809 * 27 23 22 51 51 H 1.08997 * 113.61192 * 220.01514 * 28 15 14 52 52 H 1.08998 * 113.61415 * 89.11401 * 28 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 7 4.1917 0.2074 -0.7853 7 6 4.0341 0.1739 -2.1234 8 8 3.2996 0.9736 -2.6689 9 8 4.6861 -0.7493 -2.8551 10 6 4.4641 -0.7302 -4.2899 11 6 4.8980 0.6238 -4.8550 12 6 5.2830 -1.8428 -4.9474 13 6 2.9781 -0.9510 -4.5791 14 6 4.1765 1.4480 1.4003 15 6 5.1720 2.4293 0.7595 16 1 6.0768 1.9521 0.3832 17 7 5.4513 3.6058 1.5867 18 6 6.6428 3.7276 2.2047 19 8 7.4863 2.8611 2.0753 20 6 6.9236 4.9109 3.0373 21 6 6.0906 5.9630 3.2825 22 8 6.7238 6.8239 4.0851 23 6 7.9551 6.3823 4.3852 24 6 8.9493 7.0961 5.2646 25 8 10.0840 7.4806 4.4858 26 14 8.1543 8.6144 5.9952 27 6 8.1579 5.2013 3.7813 28 6 4.1096 2.6766 -0.3244 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 4.7190 -0.4752 -0.3417 33 1 5.9567 0.7811 -4.6490 34 1 4.7318 0.6380 -5.9322 35 1 4.3150 1.4167 -4.3867 36 1 4.9744 -2.8075 -4.5448 37 1 5.1167 -1.8282 -6.0246 38 1 6.3417 -1.6850 -4.7414 39 1 2.3950 -0.1580 -4.1106 40 1 2.8115 -0.9371 -5.6562 41 1 2.6690 -1.9156 -4.1764 42 1 3.5009 1.9164 2.1160 43 1 4.6439 0.5427 1.7879 44 1 4.7786 4.2970 1.6897 45 1 5.0898 6.0803 2.8942 46 1 9.2678 6.4309 6.0671 47 1 9.8745 8.0742 3.7518 48 1 9.1246 9.3276 6.8640 49 1 7.6870 9.5148 4.9107 50 1 9.0468 4.5899 3.8305 51 1 4.5230 2.7633 -1.3292 52 1 3.4157 3.4809 -0.0802 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13976896_13456056.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:41:40 Heat of formation + Delta-G solvation = -174.902104 kcal Electronic energy + Delta-G solvation = -38519.085773 eV Core-core repulsion = 33261.170768 eV Total energy + Delta-G solvation = -5257.915005 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.175 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -43.70900 -42.74536 -41.56009 -40.82598 -39.62652 -38.14558 -38.03903 -37.50682 -35.73727 -35.05596 -34.08731 -33.28109 -31.70358 -29.37320 -28.40194 -28.32964 -27.33551 -27.18115 -26.51453 -24.92166 -24.03998 -22.47892 -22.30587 -21.29134 -21.16304 -20.55750 -19.46161 -19.35141 -19.16640 -18.24299 -17.82879 -17.55879 -17.52848 -17.49037 -17.38558 -17.13756 -16.74340 -16.55306 -16.10657 -15.96370 -15.74116 -15.63263 -15.40414 -14.98150 -14.84468 -14.53996 -14.42450 -14.22256 -13.96247 -13.88987 -13.75181 -13.62214 -13.49136 -13.36568 -13.18525 -13.08860 -12.95489 -12.94176 -12.90138 -12.64596 -12.54034 -12.38490 -12.19272 -12.14016 -11.90415 -11.78896 -11.44337 -11.30647 -11.18866 -10.96161 -10.75815 -10.55117 -10.26204 -9.78905 -4.91064 0.26392 0.71138 0.82757 1.05224 1.18928 1.38891 1.54305 1.68922 1.77117 1.96830 2.06839 2.21260 2.85002 2.96149 3.02095 3.22868 3.39764 3.49229 3.56380 3.60124 3.69934 3.76106 3.90636 3.93995 4.01091 4.19019 4.23472 4.29881 4.33233 4.43525 4.44357 4.50208 4.53187 4.56939 4.58376 4.61605 4.69009 4.72768 4.74057 4.77226 4.83585 4.85102 4.91104 4.98390 5.14015 5.14942 5.21559 5.23953 5.28234 5.33340 5.47719 5.84780 6.17048 6.35287 6.41285 6.51563 7.09346 7.17119 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.358 6.358 3 C 0.473 3.527 4 O -0.519 6.519 5 C 0.174 3.826 6 N -0.676 5.676 7 C 0.652 3.348 8 O -0.581 6.581 9 O -0.362 6.362 10 C 0.128 3.872 11 C -0.180 4.180 12 C -0.138 4.138 13 C -0.179 4.179 14 C -0.122 4.122 15 C 0.137 3.863 16 H 0.115 0.885 17 N -0.699 5.699 18 C 0.593 3.407 19 O -0.577 6.577 20 C -0.269 4.269 21 C 0.066 3.934 22 O -0.166 6.166 23 C -0.052 4.052 24 C -0.044 4.044 25 O -0.540 6.540 26 Si 0.789 3.211 27 C -0.147 4.147 28 C -0.123 4.123 29 H 0.071 0.929 30 H 0.053 0.947 31 H 0.127 0.873 32 H 0.428 0.572 33 H 0.062 0.938 34 H 0.086 0.914 35 H 0.065 0.935 36 H 0.070 0.930 37 H 0.099 0.901 38 H 0.069 0.931 39 H 0.061 0.939 40 H 0.087 0.913 41 H 0.062 0.938 42 H 0.128 0.872 43 H 0.116 0.884 44 H 0.418 0.582 45 H 0.261 0.739 46 H 0.149 0.851 47 H 0.390 0.610 48 H -0.289 1.289 49 H -0.287 1.287 50 H 0.146 0.854 51 H 0.081 0.919 52 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.771 -0.768 2.347 4.508 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.274 6.274 3 C 0.315 3.685 4 O -0.406 6.406 5 C 0.084 3.916 6 N -0.338 5.338 7 C 0.406 3.594 8 O -0.471 6.471 9 O -0.277 6.277 10 C 0.092 3.908 11 C -0.237 4.237 12 C -0.195 4.195 13 C -0.236 4.236 14 C -0.161 4.161 15 C 0.031 3.969 16 H 0.133 0.867 17 N -0.351 5.351 18 C 0.382 3.618 19 O -0.458 6.458 20 C -0.273 4.273 21 C -0.004 4.004 22 O -0.062 6.062 23 C -0.101 4.101 24 C -0.152 4.152 25 O -0.348 6.348 26 Si 0.692 3.308 27 C -0.167 4.167 28 C -0.162 4.162 29 H 0.090 0.910 30 H 0.072 0.928 31 H 0.145 0.855 32 H 0.267 0.733 33 H 0.081 0.919 34 H 0.105 0.895 35 H 0.084 0.916 36 H 0.089 0.911 37 H 0.117 0.883 38 H 0.088 0.912 39 H 0.080 0.920 40 H 0.105 0.895 41 H 0.081 0.919 42 H 0.146 0.854 43 H 0.134 0.866 44 H 0.257 0.743 45 H 0.277 0.723 46 H 0.167 0.833 47 H 0.240 0.760 48 H -0.216 1.216 49 H -0.214 1.214 50 H 0.164 0.836 51 H 0.100 0.900 52 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -3.507 0.016 2.488 4.300 hybrid contribution 0.276 -0.114 -1.331 1.364 sum -3.231 -0.098 1.158 3.434 Atomic orbital electron populations 1.23531 0.74874 1.05570 1.02494 1.86513 1.24843 1.32838 1.83206 1.23857 0.91746 0.81581 0.71347 1.90660 1.66806 1.37056 1.46092 1.20840 0.84044 0.90041 0.96637 1.44098 1.55761 1.30976 1.03009 1.18197 0.78536 0.79752 0.82901 1.90954 1.41308 1.43369 1.71421 1.86328 1.65592 1.52796 1.22957 1.22389 0.96793 0.97836 0.73759 1.22479 1.01928 0.96520 1.02819 1.21897 0.99952 0.96479 1.01175 1.22457 0.94733 1.02587 1.03814 1.23879 0.97919 1.02461 0.91860 1.22282 0.97437 0.86636 0.90519 0.86716 1.45548 1.16107 1.24117 1.49324 1.17469 0.81570 0.84534 0.78212 1.90800 1.47560 1.43491 1.63919 1.21444 0.97815 0.99168 1.08894 1.25326 0.98742 0.86253 0.90107 1.83728 1.24895 1.44682 1.52874 1.22686 0.86034 0.96523 1.04815 1.24685 0.86689 1.09244 0.94625 1.86648 1.31768 1.69081 1.47333 0.93483 0.82671 0.73589 0.81015 1.22571 0.98530 0.96720 0.98879 1.23693 0.97519 0.94372 1.00584 0.91008 0.92839 0.85494 0.73274 0.91882 0.89505 0.91627 0.91071 0.88289 0.91150 0.91967 0.89460 0.91874 0.85433 0.86593 0.74337 0.72301 0.83314 0.75960 1.21594 1.21369 0.83575 0.89997 0.85887 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 113.37 1.20 1.20 16 2 O -0.36 -1.59 10.41 -51.44 -0.54 -2.12 16 3 C 0.47 2.43 6.42 71.24 0.46 2.88 16 4 O -0.52 -4.89 15.66 21.99 0.34 -4.54 16 5 C 0.17 -0.05 1.00 3.38 0.00 -0.05 16 6 N -0.68 -0.02 5.02 -551.31 -2.77 -2.78 16 7 C 0.65 3.72 7.54 129.79 0.98 4.70 16 8 O -0.58 -6.19 10.60 19.78 0.21 -5.98 16 9 O -0.36 -1.68 9.94 -55.47 -0.55 -2.24 16 10 C 0.13 0.31 1.13 -10.79 -0.01 0.29 16 11 C -0.18 -0.48 8.37 71.98 0.60 0.12 16 12 C -0.14 0.33 8.85 71.98 0.64 0.96 16 13 C -0.18 -0.51 8.37 71.98 0.60 0.09 16 14 C -0.12 0.70 7.16 31.12 0.22 0.92 16 15 C 0.14 -0.42 4.15 45.52 0.19 -0.23 16 16 H 0.11 0.05 7.46 -2.39 -0.02 0.03 16 17 N -0.70 3.08 5.35 -443.35 -2.37 0.71 16 18 C 0.59 1.87 7.81 86.65 0.68 2.54 16 19 O -0.58 -7.16 16.58 -4.08 -0.07 -7.23 16 20 C -0.27 -0.14 6.31 -18.99 -0.12 -0.26 16 21 C 0.07 -0.45 11.61 67.39 0.78 0.34 16 22 O -0.17 0.54 8.90 4.50 0.04 0.58 16 23 C -0.05 0.02 6.18 24.76 0.15 0.18 16 24 C -0.04 0.10 2.97 71.24 0.21 0.31 16 25 O -0.54 -0.68 12.88 -148.98 -1.92 -2.60 16 26 Si 0.79 -2.90 32.09 68.60 2.20 -0.70 16 27 C -0.15 -0.51 10.90 23.65 0.26 -0.25 16 28 C -0.12 0.14 6.59 31.12 0.21 0.34 16 29 H 0.07 -0.09 8.13 -2.39 -0.02 -0.11 16 30 H 0.05 0.14 8.13 -2.39 -0.02 0.12 16 31 H 0.13 -0.66 8.14 -2.39 -0.02 -0.68 16 32 H 0.43 -2.04 8.78 -92.71 -0.81 -2.85 16 33 H 0.06 0.13 8.14 -2.39 -0.02 0.12 16 34 H 0.09 -0.05 8.14 -2.39 -0.02 -0.06 16 35 H 0.06 0.50 5.88 -2.39 -0.01 0.48 16 36 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 37 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 38 H 0.07 -0.17 8.14 -2.38 -0.02 -0.19 16 39 H 0.06 0.52 5.88 -2.38 -0.01 0.50 16 40 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 41 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 42 H 0.13 -1.02 8.10 -2.39 -0.02 -1.04 16 43 H 0.12 -0.94 8.10 -2.38 -0.02 -0.96 16 44 H 0.42 -4.72 7.70 -92.70 -0.71 -5.43 16 45 H 0.26 -4.57 7.47 -2.91 -0.02 -4.60 16 46 H 0.15 -0.73 7.96 -2.39 -0.02 -0.75 16 47 H 0.39 -1.71 8.70 -74.06 -0.64 -2.35 16 48 H -0.29 -0.83 7.11 99.48 0.71 -0.12 16 49 H -0.29 -0.44 7.11 99.48 0.71 0.26 16 50 H 0.15 0.87 8.06 -2.91 -0.02 0.85 16 51 H 0.08 0.20 7.41 -2.39 -0.02 0.19 16 52 H 0.12 -0.28 7.32 -2.39 -0.02 -0.30 16 Total: 0.00 -30.89 437.80 0.49 -30.40 By element: Atomic # 1 Polarization: -16.47 SS G_CDS: -1.14 Total: -17.61 kcal Atomic # 6 Polarization: 7.05 SS G_CDS: 7.05 Total: 14.10 kcal Atomic # 7 Polarization: 3.07 SS G_CDS: -5.14 Total: -2.07 kcal Atomic # 8 Polarization: -21.65 SS G_CDS: -2.48 Total: -24.13 kcal Atomic # 14 Polarization: -2.90 SS G_CDS: 2.20 Total: -0.70 kcal Total: -30.89 0.49 -30.40 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13976896_13456056.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -144.502 kcal (2) G-P(sol) polarization free energy of solvation -30.894 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -175.397 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.495 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.400 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.902 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds