Wall clock time and date at job start Sat Mar 6 2021 23:41:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.52999 * 109.47232 * 2 1 4 4 C 1.52998 * 109.46885 * 240.00077 * 2 1 3 5 5 Si 1.86296 * 109.46837 * 120.00085 * 2 1 3 6 6 C 1.86299 * 109.47338 * 299.99843 * 5 2 1 7 7 C 1.86302 * 109.47073 * 179.97438 * 5 2 1 8 8 O 1.63101 * 109.47107 * 60.00134 * 5 2 1 9 9 C 1.42904 * 113.99860 * 179.97438 * 8 5 2 10 10 C 1.53002 * 109.46938 * 179.97438 * 9 8 5 11 11 C 1.53947 * 113.73874 * 174.99950 * 10 9 8 12 12 N 1.47584 * 86.11565 * 137.95347 * 11 10 9 13 13 C 1.34776 * 134.49098 * 155.35611 * 12 11 10 14 14 O 1.21701 * 120.00147 * 0.02562 * 13 12 11 15 15 C 1.46673 * 119.99920 * 179.97438 * 13 12 11 16 16 C 1.37872 * 126.23400 * 180.02562 * 15 13 12 17 17 C 1.39839 * 107.08557 * 179.97438 * 16 15 13 18 18 C 1.50703 * 126.06558 * 179.97438 * 17 16 15 19 19 O 1.42894 * 109.47114 * 65.00102 * 18 17 16 20 20 Si 1.86302 * 109.46806 * 185.00107 * 18 17 16 21 21 H 1.48503 * 109.47333 * 60.00071 * 20 18 17 22 22 H 1.48497 * 109.46948 * 179.97438 * 20 18 17 23 23 H 1.48503 * 109.47188 * 300.00092 * 20 18 17 24 24 C 1.35448 * 107.86377 * 0.02562 * 17 16 15 25 25 N 1.35537 * 108.87296 * 359.76455 * 24 17 16 26 26 C 1.47576 * 91.01498 * 335.35788 * 12 11 10 27 27 H 1.08999 * 109.46834 * 300.00251 * 1 2 3 28 28 H 1.08999 * 109.46612 * 59.99617 * 1 2 3 29 29 H 1.08999 * 109.47263 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.46726 * 179.97438 * 3 2 1 31 31 H 1.09000 * 109.47261 * 300.00148 * 3 2 1 32 32 H 1.09001 * 109.47016 * 59.99765 * 3 2 1 33 33 H 1.08999 * 109.47179 * 300.00062 * 4 2 1 34 34 H 1.09002 * 109.47616 * 60.00023 * 4 2 1 35 35 H 1.08997 * 109.47090 * 180.02562 * 4 2 1 36 36 H 1.09000 * 109.47074 * 180.02562 * 6 5 2 37 37 H 1.09006 * 109.46834 * 299.99848 * 6 5 2 38 38 H 1.08997 * 109.47234 * 59.99780 * 6 5 2 39 39 H 1.09001 * 109.47408 * 300.00065 * 7 5 2 40 40 H 1.08999 * 109.46931 * 60.00061 * 7 5 2 41 41 H 1.09000 * 109.47355 * 180.02562 * 7 5 2 42 42 H 1.09004 * 109.47342 * 59.99809 * 9 8 5 43 43 H 1.08997 * 109.47102 * 299.99639 * 9 8 5 44 44 H 1.08999 * 113.01600 * 43.34083 * 10 9 8 45 45 H 1.09001 * 113.76955 * 252.25382 * 11 10 9 46 46 H 1.08997 * 113.77064 * 23.65458 * 11 10 9 47 47 H 1.08002 * 126.46059 * 359.97438 * 16 15 13 48 48 H 1.09003 * 109.47216 * 304.99888 * 18 17 16 49 49 H 0.96700 * 113.99892 * 59.99850 * 19 18 17 50 50 H 1.08005 * 125.56390 * 179.97438 * 24 17 16 51 51 H 0.97006 * 125.67631 * 180.26301 * 25 24 17 52 52 H 1.09003 * 113.77250 * 270.33779 * 26 12 11 53 53 H 1.08995 * 113.76824 * 138.94137 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 14 2.1510 -0.8782 1.5211 6 6 1.5300 0.0000 3.0423 7 6 4.0140 -0.8790 1.5208 8 8 1.6073 -2.4160 1.5210 9 6 2.0294 -3.1817 2.6514 10 6 1.4634 -4.5994 2.5470 11 6 1.9578 -5.5471 3.6548 12 7 0.5659 -6.0332 3.7213 13 6 -0.0155 -7.1815 4.1209 14 8 0.6688 -8.0955 4.5424 15 6 -1.4730 -7.3293 4.0490 16 6 -2.1988 -8.4407 4.4218 17 6 -3.5462 -8.1491 4.1874 18 6 -4.7111 -9.0697 4.4455 19 8 -4.8219 -9.3158 5.8487 20 14 -6.2791 -8.2749 3.8286 21 1 -6.1640 -8.0192 2.3703 22 1 -7.4269 -9.1823 4.0823 23 1 -6.4962 -6.9900 4.5408 24 6 -3.6183 -6.8929 3.6861 25 7 -2.3657 -6.3820 3.6016 26 6 0.0664 -4.7568 3.1743 27 1 -0.3633 0.5139 0.8900 28 1 -0.3632 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 3.1301 1.4424 0.0005 31 1 1.6768 1.9563 -0.8900 32 1 1.6767 1.9563 0.8900 33 1 1.6766 -1.7489 -1.2493 34 1 1.6767 -0.2074 -2.1393 35 1 3.1300 -0.7216 -1.2491 36 1 1.8937 -0.5137 3.9322 37 1 1.8935 1.0276 3.0423 38 1 0.4400 0.0000 3.0422 39 1 4.3770 -1.3930 0.6308 40 1 4.3777 0.1486 1.5206 41 1 4.3773 -1.3932 2.4105 42 1 1.6653 -2.7119 3.5651 43 1 3.1182 -3.2256 2.6744 44 1 1.5437 -5.0175 1.5436 45 1 2.6687 -6.2966 3.3069 46 1 2.2873 -5.0333 4.5579 47 1 -1.8016 -9.3628 4.8199 48 1 -4.5517 -10.0128 3.9226 49 1 -4.9652 -8.5190 6.3776 50 1 -4.5261 -6.3805 3.4032 51 1 -2.1365 -5.4966 3.2783 52 1 -0.1598 -4.0108 3.9361 53 1 -0.7328 -4.8752 2.4426 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14186584_10543058.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:41:24 Heat of formation + Delta-G solvation = -85.100770 kcal Electronic energy + Delta-G solvation = -29678.666902 eV Core-core repulsion = 25675.620303 eV Total energy + Delta-G solvation = -4003.046599 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 354.193 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -42.54474 -41.18109 -38.98779 -37.61145 -37.59410 -36.95181 -32.85789 -31.81385 -30.48864 -29.55543 -29.22141 -27.98118 -27.72942 -27.50578 -27.21831 -26.10239 -23.49752 -21.56161 -21.05082 -20.67687 -20.53835 -19.14445 -17.99173 -17.62476 -17.50827 -17.27319 -16.61935 -16.33851 -16.07718 -15.97879 -15.56934 -15.47610 -14.99542 -14.95845 -14.84345 -14.67721 -14.32993 -14.30705 -14.09496 -13.97952 -13.89450 -13.71363 -13.58090 -13.47891 -13.39597 -13.32369 -13.05560 -13.04562 -12.69677 -12.53170 -12.39848 -12.32507 -12.11991 -11.88783 -11.83281 -11.75775 -11.61906 -11.51456 -10.99227 -10.51266 -10.32153 -10.19835 -9.97070 -9.88968 -9.27538 0.43170 1.21243 1.24942 1.43324 1.48426 1.56400 1.59477 1.62045 1.90778 1.95640 2.00475 2.27253 2.39910 3.01214 3.30362 3.61003 3.64726 3.72023 3.85896 3.98234 4.00283 4.00563 4.01146 4.05893 4.12071 4.18035 4.32588 4.33836 4.35529 4.47428 4.53753 4.56132 4.58948 4.60203 4.61222 4.70118 4.73987 4.80443 4.88254 4.92068 4.96615 4.98896 4.99601 5.07305 5.10448 5.22302 5.25643 5.29723 5.37105 5.41632 5.47699 5.64582 5.84428 6.24547 6.49254 6.71069 7.09240 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.375 4.375 3 C -0.137 4.137 4 C -0.134 4.134 5 Si 1.290 2.710 6 C -0.512 4.512 7 C -0.513 4.513 8 O -0.623 6.623 9 C 0.092 3.908 10 C -0.116 4.116 11 C 0.115 3.885 12 N -0.650 5.650 13 C 0.613 3.387 14 O -0.522 6.522 15 C -0.052 4.052 16 C -0.073 4.073 17 C -0.209 4.209 18 C -0.046 4.046 19 O -0.540 6.540 20 Si 0.947 3.053 21 H -0.252 1.252 22 H -0.252 1.252 23 H -0.254 1.254 24 C 0.024 3.976 25 N -0.536 5.536 26 C 0.094 3.906 27 H 0.054 0.946 28 H 0.053 0.947 29 H 0.059 0.941 30 H 0.056 0.944 31 H 0.056 0.944 32 H 0.056 0.944 33 H 0.059 0.941 34 H 0.053 0.947 35 H 0.054 0.946 36 H 0.066 0.934 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.073 0.927 40 H 0.074 0.926 41 H 0.066 0.934 42 H 0.062 0.938 43 H 0.066 0.934 44 H 0.118 0.882 45 H 0.092 0.908 46 H 0.091 0.909 47 H 0.152 0.848 48 H 0.115 0.885 49 H 0.374 0.626 50 H 0.170 0.830 51 H 0.417 0.583 52 H 0.093 0.907 53 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.595 6.665 -1.813 6.933 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.419 4.419 3 C -0.195 4.195 4 C -0.191 4.191 5 Si 1.421 2.579 6 C -0.614 4.614 7 C -0.614 4.614 8 O -0.582 6.582 9 C 0.016 3.984 10 C -0.136 4.136 11 C -0.007 4.007 12 N -0.387 5.387 13 C 0.404 3.596 14 O -0.398 6.398 15 C -0.164 4.164 16 C -0.100 4.100 17 C -0.216 4.216 18 C -0.157 4.157 19 O -0.345 6.345 20 Si 0.769 3.231 21 H -0.175 1.175 22 H -0.176 1.176 23 H -0.177 1.177 24 C -0.112 4.112 25 N -0.134 5.134 26 C -0.029 4.029 27 H 0.073 0.927 28 H 0.072 0.928 29 H 0.078 0.922 30 H 0.075 0.925 31 H 0.075 0.925 32 H 0.075 0.925 33 H 0.078 0.922 34 H 0.072 0.928 35 H 0.073 0.927 36 H 0.085 0.915 37 H 0.094 0.906 38 H 0.091 0.909 39 H 0.092 0.908 40 H 0.093 0.907 41 H 0.086 0.914 42 H 0.080 0.920 43 H 0.084 0.916 44 H 0.136 0.864 45 H 0.110 0.890 46 H 0.109 0.891 47 H 0.170 0.830 48 H 0.133 0.867 49 H 0.221 0.779 50 H 0.187 0.813 51 H 0.257 0.743 52 H 0.111 0.889 53 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -1.056 5.688 -2.203 6.191 hybrid contribution 0.612 1.481 0.212 1.616 sum -0.445 7.169 -1.991 7.454 Atomic orbital electron populations 1.21511 0.93855 1.01900 1.01820 1.25801 1.00647 1.02681 1.12760 1.21558 1.00824 0.94888 1.02181 1.21512 1.00656 1.00198 0.96773 0.76665 0.63033 0.53328 0.64904 1.27048 1.06947 1.09651 1.17741 1.27048 1.25039 1.04824 1.04535 1.85365 1.79309 1.46061 1.47480 1.21991 0.98711 0.90545 0.87189 1.23253 0.94694 0.94822 1.00786 1.23194 0.84896 0.95072 0.97558 1.49840 1.10148 1.13238 1.65454 1.16677 0.85170 0.81080 0.76647 1.90890 1.63291 1.39348 1.46250 1.20337 0.89138 0.92613 1.14351 1.21214 0.91416 0.97419 0.99914 1.19887 0.95945 0.95756 1.10052 1.24297 1.02297 1.02834 0.86309 1.86518 1.95333 1.36234 1.16398 0.85792 0.77126 0.79749 0.80391 1.17523 1.17570 1.17737 1.21886 0.88007 0.95737 1.05603 1.42258 1.06168 1.15016 1.49965 1.23479 0.98336 0.84522 0.96519 0.92726 0.92792 0.92224 0.92483 0.92470 0.92522 0.92174 0.92788 0.92670 0.91481 0.90643 0.90904 0.90806 0.90686 0.91436 0.92028 0.91571 0.86359 0.88982 0.89120 0.82987 0.86721 0.77909 0.81260 0.74300 0.88887 0.90140 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.21 7.85 37.16 0.29 0.50 16 2 C -0.38 0.68 0.53 -90.62 -0.05 0.64 16 3 C -0.14 0.24 7.85 37.16 0.29 0.54 16 4 C -0.13 0.17 7.85 37.16 0.29 0.46 16 5 Si 1.29 -3.92 8.45 -169.99 -1.44 -5.35 16 6 C -0.51 1.35 8.50 101.05 0.86 2.21 16 7 C -0.51 1.15 8.50 101.05 0.86 2.01 16 8 O -0.62 1.59 8.56 -35.23 -0.30 1.29 16 9 C 0.09 -0.36 4.98 37.16 0.19 -0.17 16 10 C -0.12 0.39 4.20 -89.69 -0.38 0.01 16 11 C 0.11 -0.22 8.40 -2.97 -0.02 -0.25 16 12 N -0.65 -0.11 3.61 -179.91 -0.65 -0.76 16 13 C 0.61 2.29 8.02 -12.86 -0.10 2.19 16 14 O -0.52 -4.03 17.61 5.19 0.09 -3.94 16 15 C -0.05 -0.12 7.01 -81.98 -0.57 -0.70 16 16 C -0.07 -0.21 10.59 -39.12 -0.41 -0.63 16 17 C -0.21 -0.18 5.43 -105.02 -0.57 -0.75 16 18 C -0.05 0.00 3.02 36.01 0.11 0.11 16 19 O -0.54 -0.61 12.88 -35.23 -0.45 -1.06 16 20 Si 0.95 -1.04 25.89 -169.99 -4.40 -5.44 16 21 H -0.25 0.18 7.11 56.52 0.40 0.58 16 22 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 23 H -0.25 0.35 7.11 56.52 0.40 0.75 16 24 C 0.02 -0.02 10.45 -16.91 -0.18 -0.20 16 25 N -0.54 0.42 5.88 -9.39 -0.06 0.37 16 26 C 0.09 -0.31 6.92 -2.98 -0.02 -0.34 16 27 H 0.05 -0.12 7.79 -51.93 -0.40 -0.52 16 28 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 29 H 0.06 -0.10 7.97 -51.93 -0.41 -0.51 16 30 H 0.06 -0.13 7.79 -51.93 -0.40 -0.53 16 31 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.06 -0.13 7.79 -51.93 -0.40 -0.54 16 33 H 0.06 -0.07 7.97 -51.93 -0.41 -0.49 16 34 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.05 -0.09 7.79 -51.93 -0.40 -0.50 16 36 H 0.07 -0.20 7.48 -51.93 -0.39 -0.59 16 37 H 0.07 -0.18 7.79 -51.93 -0.40 -0.59 16 38 H 0.07 -0.18 7.79 -51.93 -0.40 -0.59 16 39 H 0.07 -0.14 7.79 -51.93 -0.40 -0.54 16 40 H 0.07 -0.16 7.79 -51.93 -0.40 -0.57 16 41 H 0.07 -0.18 7.48 -51.93 -0.39 -0.57 16 42 H 0.06 -0.32 6.91 -51.93 -0.36 -0.68 16 43 H 0.07 -0.32 7.21 -51.93 -0.37 -0.70 16 44 H 0.12 -0.33 8.14 -51.93 -0.42 -0.75 16 45 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 46 H 0.09 -0.31 8.10 -51.93 -0.42 -0.73 16 47 H 0.15 0.54 8.06 -52.49 -0.42 0.12 16 48 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 49 H 0.37 -0.82 8.70 45.56 0.40 -0.43 16 50 H 0.17 -0.59 6.21 -52.48 -0.33 -0.92 16 51 H 0.42 -1.45 5.78 -40.82 -0.24 -1.69 16 52 H 0.09 -0.46 7.89 -51.93 -0.41 -0.87 16 53 H 0.08 -0.35 6.51 -51.93 -0.34 -0.69 16 LS Contribution 421.53 15.07 6.35 6.35 Total: 0.00 -8.73 421.53 -8.93 -17.66 By element: Atomic # 1 Polarization: -6.10 SS G_CDS: -8.65 Total: -14.75 kcal Atomic # 6 Polarization: 5.05 SS G_CDS: 0.58 Total: 5.63 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.70 Total: -0.39 kcal Atomic # 8 Polarization: -3.04 SS G_CDS: -0.66 Total: -3.71 kcal Atomic # 14 Polarization: -4.96 SS G_CDS: -5.84 Total: -10.80 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -8.73 -8.93 -17.66 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14186584_10543058.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.440 kcal (2) G-P(sol) polarization free energy of solvation -8.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.928 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.661 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds