Wall clock time and date at job start Sun Mar 7 2021 01:36:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 O 1.42900 * 109.47172 * 2 1 4 4 C 1.35901 * 116.99996 * 275.32305 * 3 2 1 5 5 C 1.38725 * 120.05386 * 5.08354 * 4 3 2 6 6 C 1.38155 * 119.94078 * 179.70049 * 5 4 3 7 7 C 1.38261 * 120.05415 * 0.59561 * 6 5 4 8 8 C 1.50701 * 119.94435 * 179.70399 * 7 6 5 9 9 O 1.42894 * 109.47432 * 119.98045 * 8 7 6 10 10 Si 1.86303 * 109.47044 * 359.97438 * 8 7 6 11 11 C 1.38268 * 120.11162 * 359.67968 * 7 6 5 12 12 C 1.38139 * 120.05961 * 0.02562 * 11 7 6 13 13 C 1.50708 * 109.47103 * 119.99880 * 2 1 3 14 14 O 1.21285 * 119.99915 * 245.00364 * 13 2 1 15 15 N 1.34770 * 119.99669 * 64.99878 * 13 2 1 16 16 C 1.46501 * 119.99967 * 179.97438 * 15 13 2 17 17 H 1.09008 * 112.85004 * 336.20135 * 16 15 13 18 18 C 1.53784 * 113.61398 * 107.50158 * 16 15 13 19 19 C 1.53780 * 87.07703 * 89.12095 * 18 16 15 20 20 H 1.08999 * 113.69060 * 270.87399 * 19 18 16 21 21 C 1.50696 * 113.61516 * 139.98176 * 19 18 16 22 22 C 1.38200 * 119.99985 * 142.49746 * 21 19 18 23 23 C 1.38339 * 119.99194 * 180.02562 * 22 21 19 24 24 Br 1.89103 * 120.00806 * 180.02562 * 23 22 21 25 25 C 1.38300 * 119.98328 * 0.02562 * 23 22 21 26 26 C 1.38241 * 119.98984 * 0.02562 * 25 23 22 27 27 C 1.38222 * 120.00897 * 0.24994 * 26 25 23 28 28 C 1.53778 * 113.61940 * 205.00330 * 16 15 13 29 29 H 1.09003 * 109.47091 * 300.00025 * 1 2 3 30 30 H 1.09000 * 109.46962 * 59.99917 * 1 2 3 31 31 H 1.08996 * 109.46999 * 180.02562 * 1 2 3 32 32 H 1.08999 * 109.47508 * 239.99707 * 2 1 3 33 33 H 1.07992 * 120.02978 * 359.97438 * 5 4 3 34 34 H 1.08000 * 119.97030 * 180.27871 * 6 5 4 35 35 H 1.08997 * 109.47058 * 239.97819 * 8 7 6 36 36 H 0.96704 * 113.99885 * 299.99354 * 9 8 7 37 37 H 1.48501 * 109.99786 * 58.68334 * 10 8 7 38 38 H 1.48502 * 110.00102 * 180.02562 * 10 8 7 39 39 H 1.08003 * 119.97127 * 179.97438 * 11 7 6 40 40 H 1.07999 * 120.03074 * 179.97438 * 12 11 7 41 41 H 0.96998 * 120.00031 * 0.02562 * 15 13 2 42 42 H 1.09003 * 113.61499 * 334.57329 * 18 16 15 43 43 H 1.08998 * 113.61357 * 203.66622 * 18 16 15 44 44 H 1.08002 * 120.00008 * 0.04995 * 22 21 19 45 45 H 1.08001 * 120.00923 * 179.97438 * 25 23 22 46 46 H 1.07998 * 119.99702 * 179.97438 * 26 25 23 47 47 H 1.07993 * 119.99065 * 179.74754 * 27 26 25 48 48 H 1.08999 * 113.61427 * 156.33320 * 28 16 15 49 49 H 1.08998 * 113.68405 * 25.44193 * 28 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1061 1.9664 -1.2057 5 6 1.6545 1.3303 -2.3528 6 6 1.7513 1.9644 -3.5764 7 6 2.3091 3.2268 -3.6599 8 6 2.4196 3.9134 -4.9968 9 8 1.6857 5.1391 -4.9650 10 14 1.7224 2.8062 -6.3231 11 6 2.7651 3.8605 -2.5188 12 6 2.6650 3.2333 -1.2920 13 6 2.0323 -0.7104 1.2305 14 8 2.6529 -0.0979 2.0735 15 7 1.7918 -2.0263 1.3942 16 6 2.2806 -2.7171 2.5901 17 1 3.1345 -2.2178 3.0481 18 6 1.1692 -3.0811 3.5888 19 6 1.0205 -4.4047 2.8201 20 1 0.3125 -4.3536 1.9929 21 6 0.7938 -5.5983 3.7116 22 6 -0.0677 -6.6034 3.3147 23 6 -0.2762 -7.6989 4.1335 24 35 -1.4543 -9.0748 3.5906 25 6 0.3773 -7.7874 5.3491 26 6 1.2381 -6.7811 5.7459 27 6 1.4417 -5.6840 4.9301 28 6 2.4858 -4.2277 2.3884 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 1.8934 -0.5139 -0.8899 33 1 1.2235 0.3422 -2.2888 34 1 1.3958 1.4714 -4.4692 35 1 3.4674 4.1228 -5.2122 36 1 0.7434 5.0285 -4.7782 37 1 0.3031 2.4873 -6.0242 38 1 1.8260 3.4717 -7.6466 39 1 3.2008 4.8464 -2.5866 40 1 3.0217 3.7286 -0.4011 41 1 1.2958 -2.5163 0.7199 42 1 0.2931 -2.4361 3.5212 43 1 1.5252 -3.2076 4.6112 44 1 -0.5779 -6.5339 2.3653 45 1 0.2146 -8.6422 5.9889 46 1 1.7481 -6.8499 6.6953 47 1 2.1111 -4.8961 5.2421 48 1 3.2017 -4.6677 3.0827 49 1 2.6729 -4.5097 1.3523 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:36:26 Heat of formation + Delta-G solvation = -11.522123 kcal Electronic energy + Delta-G solvation = -31732.600011 eV Core-core repulsion = 27252.965568 eV Total energy + Delta-G solvation = -4479.634443 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.077 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -41.94755 -41.33424 -40.39886 -39.30506 -38.62792 -37.26287 -34.96434 -33.42221 -32.98381 -32.09099 -31.76176 -31.39351 -30.09176 -26.84419 -26.69101 -26.42022 -25.26414 -24.13910 -23.52002 -22.73636 -22.31626 -21.51401 -20.11400 -19.52268 -18.65929 -18.30464 -17.91779 -17.19372 -16.86615 -16.79267 -16.59676 -16.24422 -16.15134 -16.09052 -15.69069 -15.63368 -15.28088 -15.07098 -14.68233 -14.58777 -14.49291 -14.47780 -14.26318 -14.07614 -13.71751 -13.55131 -13.42840 -13.35998 -13.22386 -12.92010 -12.89921 -12.32274 -12.25514 -12.09673 -12.07785 -12.00412 -11.90421 -11.58542 -11.53479 -11.35629 -11.15823 -10.93407 -10.58717 -10.17312 -10.03656 -9.83962 -9.60125 -9.22710 -4.90296 0.10381 0.26815 0.29040 0.30331 0.64924 1.34365 1.39505 1.48017 1.62055 1.99324 2.48374 2.58207 2.64717 3.42663 3.44753 3.45565 3.61909 3.66338 3.69756 3.73075 3.83892 3.86486 3.89189 3.94661 3.97590 4.11077 4.12705 4.29202 4.30461 4.36784 4.42748 4.54163 4.60590 4.60877 4.66013 4.68146 4.72769 4.78242 4.84792 4.94767 4.96945 4.98890 5.03104 5.09364 5.13548 5.18838 5.22957 5.25655 5.37282 5.45689 5.49321 5.62818 5.70394 5.84896 6.26213 6.45326 6.51281 7.09939 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.064 3.936 3 O -0.314 6.314 4 C 0.122 3.878 5 C -0.202 4.202 6 C -0.074 4.074 7 C -0.158 4.158 8 C -0.082 4.082 9 O -0.551 6.551 10 Si 0.771 3.229 11 C -0.059 4.059 12 C -0.167 4.167 13 C 0.519 3.481 14 O -0.569 6.569 15 N -0.690 5.690 16 C 0.115 3.885 17 H 0.084 0.916 18 C -0.142 4.142 19 C -0.065 4.065 20 H 0.117 0.883 21 C -0.066 4.066 22 C -0.096 4.096 23 C -0.103 4.103 24 Br -0.062 7.062 25 C -0.109 4.109 26 C -0.115 4.115 27 C -0.106 4.106 28 C -0.123 4.123 29 H 0.056 0.944 30 H 0.086 0.914 31 H 0.111 0.889 32 H 0.132 0.868 33 H 0.163 0.837 34 H 0.154 0.846 35 H 0.121 0.879 36 H 0.386 0.614 37 H -0.277 1.277 38 H -0.308 1.308 39 H 0.133 0.867 40 H 0.125 0.875 41 H 0.420 0.580 42 H 0.070 0.930 43 H 0.098 0.902 44 H 0.141 0.859 45 H 0.136 0.864 46 H 0.148 0.852 47 H 0.145 0.855 48 H 0.102 0.898 49 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.003 -6.019 -2.795 6.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.004 3.996 3 O -0.228 6.228 4 C 0.076 3.924 5 C -0.220 4.220 6 C -0.091 4.091 7 C -0.159 4.159 8 C -0.191 4.191 9 O -0.359 6.359 10 Si 0.676 3.324 11 C -0.077 4.077 12 C -0.186 4.186 13 C 0.305 3.695 14 O -0.447 6.447 15 N -0.343 5.343 16 C 0.009 3.991 17 H 0.102 0.898 18 C -0.181 4.181 19 C -0.083 4.083 20 H 0.135 0.865 21 C -0.067 4.067 22 C -0.115 4.115 23 C -0.182 4.182 24 Br 0.024 6.976 25 C -0.129 4.129 26 C -0.134 4.134 27 C -0.124 4.124 28 C -0.160 4.160 29 H 0.075 0.925 30 H 0.105 0.895 31 H 0.130 0.870 32 H 0.150 0.850 33 H 0.181 0.819 34 H 0.171 0.829 35 H 0.139 0.861 36 H 0.235 0.765 37 H -0.204 1.204 38 H -0.236 1.236 39 H 0.151 0.849 40 H 0.143 0.857 41 H 0.259 0.741 42 H 0.089 0.911 43 H 0.116 0.884 44 H 0.159 0.841 45 H 0.153 0.847 46 H 0.166 0.834 47 H 0.163 0.837 48 H 0.120 0.880 49 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -0.976 -5.887 -2.939 6.652 hybrid contribution -0.773 1.003 0.672 1.433 sum -1.749 -4.884 -2.266 5.661 Atomic orbital electron populations 1.22378 0.90577 1.05806 1.04291 1.22446 0.97090 0.82100 0.97935 1.86197 1.81427 1.27127 1.28012 1.19238 0.95745 0.92928 0.84451 1.21489 1.06309 1.02744 0.91438 1.21063 0.96522 0.93691 0.97842 1.20287 1.03355 0.96308 0.95920 1.25241 1.02000 0.91611 1.00206 1.86569 1.25737 1.30258 1.93384 0.94157 0.81071 0.83922 0.73252 1.20905 0.96611 0.99507 0.90726 1.20622 1.04396 0.94436 0.99106 1.20537 0.78860 0.82766 0.87341 1.90759 1.41512 1.66905 1.45511 1.45370 1.57302 1.07864 1.23801 1.21870 0.97502 0.93410 0.86297 0.89755 1.23574 0.99173 0.96074 0.99276 1.21631 0.98338 0.90701 0.97620 0.86518 1.19851 0.95957 0.95523 0.95384 1.21191 0.98352 0.92277 0.99723 1.21966 1.01270 0.96160 0.98815 1.96762 1.61327 1.48426 1.91096 1.21340 0.96447 1.00237 0.94845 1.21450 0.97715 0.93311 1.00883 1.21446 0.99092 0.98264 0.93617 1.23380 0.95965 0.92697 1.04005 0.92470 0.89500 0.87014 0.85045 0.81943 0.82874 0.86129 0.76528 1.20360 1.23629 0.84911 0.85689 0.74122 0.91148 0.88373 0.84111 0.84659 0.83387 0.83719 0.88004 0.88916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.29 9.12 71.98 0.66 1.94 16 2 C 0.06 -0.18 2.64 29.85 0.08 -0.10 16 3 O -0.31 -1.82 9.34 -73.44 -0.69 -2.51 16 4 C 0.12 0.38 6.60 22.51 0.15 0.53 16 5 C -0.20 0.61 8.24 22.37 0.18 0.79 16 6 C -0.07 0.26 8.66 22.26 0.19 0.45 16 7 C -0.16 0.06 5.39 -19.85 -0.11 -0.05 16 8 C -0.08 0.09 2.82 71.24 0.20 0.29 16 9 O -0.55 -1.39 12.77 -148.98 -1.90 -3.29 16 10 Si 0.77 -2.73 29.78 68.60 2.04 -0.69 16 11 C -0.06 -0.15 9.60 22.25 0.21 0.07 16 12 C -0.17 -0.78 9.99 22.37 0.22 -0.56 16 13 C 0.52 0.93 7.18 87.66 0.63 1.56 16 14 O -0.57 -7.68 16.11 15.94 0.26 -7.43 16 15 N -0.69 4.26 5.22 -440.02 -2.30 1.96 16 16 C 0.11 -0.53 4.32 45.52 0.20 -0.34 16 17 H 0.08 0.07 7.47 -2.38 -0.02 0.05 16 18 C -0.14 0.81 7.25 31.12 0.23 1.04 16 19 C -0.06 0.54 3.86 -11.02 -0.04 0.49 16 20 H 0.12 -1.33 8.09 -2.39 -0.02 -1.35 16 21 C -0.07 0.28 5.29 -19.87 -0.11 0.18 16 22 C -0.10 0.19 9.45 22.28 0.21 0.40 16 23 C -0.10 -0.08 6.22 22.31 0.14 0.06 16 24 Br -0.06 -0.11 33.70 -20.37 -0.69 -0.80 16 25 C -0.11 0.04 9.79 22.29 0.22 0.26 16 26 C -0.11 0.34 10.05 22.27 0.22 0.56 16 27 C -0.11 0.44 8.63 22.27 0.19 0.64 16 28 C -0.12 1.07 7.29 31.12 0.23 1.30 16 29 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 30 H 0.09 -0.73 6.91 -2.39 -0.02 -0.75 16 31 H 0.11 -1.57 7.92 -2.39 -0.02 -1.59 16 32 H 0.13 -1.25 6.31 -2.39 -0.02 -1.27 16 33 H 0.16 -1.60 5.43 -2.91 -0.02 -1.62 16 34 H 0.15 -1.32 4.87 -2.91 -0.01 -1.34 16 35 H 0.12 -0.25 7.96 -2.39 -0.02 -0.27 16 36 H 0.39 -1.21 8.70 -74.05 -0.64 -1.85 16 37 H -0.28 0.20 7.11 99.48 0.71 0.91 16 38 H -0.31 -1.53 7.11 99.48 0.71 -0.83 16 39 H 0.13 0.23 8.06 -2.91 -0.02 0.20 16 40 H 0.13 0.67 8.06 -2.91 -0.02 0.65 16 41 H 0.42 -5.77 8.48 -92.71 -0.79 -6.55 16 42 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 43 H 0.10 -0.57 6.29 -2.39 -0.02 -0.58 16 44 H 0.14 -0.65 8.05 -2.91 -0.02 -0.68 16 45 H 0.14 -0.26 8.06 -2.91 -0.02 -0.28 16 46 H 0.15 -1.00 8.06 -2.91 -0.02 -1.02 16 47 H 0.15 -1.09 6.64 -2.91 -0.02 -1.11 16 48 H 0.10 -0.86 7.73 -2.39 -0.02 -0.88 16 49 H 0.09 -1.00 8.14 -2.39 -0.02 -1.02 16 Total: 0.00 -25.12 421.04 0.25 -24.87 By element: Atomic # 1 Polarization: -21.26 SS G_CDS: -0.38 Total: -21.64 kcal Atomic # 6 Polarization: 5.62 SS G_CDS: 3.91 Total: 9.52 kcal Atomic # 7 Polarization: 4.26 SS G_CDS: -2.30 Total: 1.96 kcal Atomic # 8 Polarization: -10.90 SS G_CDS: -2.33 Total: -13.23 kcal Atomic # 14 Polarization: -2.73 SS G_CDS: 2.04 Total: -0.69 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -0.69 Total: -0.80 kcal Total: -25.12 0.25 -24.87 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.344 kcal (2) G-P(sol) polarization free energy of solvation -25.118 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.866 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.522 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds