Wall clock time and date at job start Sun Mar 7 2021 01:36:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.35525 * 125.68050 * 2 1 4 4 C 1.35452 * 108.87141 * 180.02562 * 3 2 1 5 5 C 1.50700 * 126.06626 * 180.02562 * 4 3 2 6 6 O 1.42902 * 109.47140 * 244.97831 * 5 4 3 7 7 Si 1.86303 * 109.47317 * 4.97896 * 5 4 3 8 8 C 1.39834 * 107.86432 * 359.74642 * 4 3 2 9 9 C 1.37657 * 125.67335 * 180.02562 * 2 1 3 10 10 C 1.46679 * 126.23375 * 359.97438 * 9 2 1 11 11 O 1.21697 * 119.99941 * 5.29803 * 10 9 2 12 12 N 1.34771 * 119.99784 * 185.29906 * 10 9 2 13 13 C 1.46500 * 119.99919 * 174.96854 * 12 10 9 14 14 H 1.08999 * 112.85090 * 25.61522 * 13 12 10 15 15 C 1.53780 * 113.61468 * 156.80384 * 13 12 10 16 16 C 1.53774 * 87.08114 * 89.11730 * 15 13 12 17 17 H 1.09005 * 113.61850 * 270.88442 * 16 15 13 18 18 C 1.50704 * 113.61426 * 140.06473 * 16 15 13 19 19 C 1.38198 * 119.99411 * 120.00331 * 18 16 15 20 20 C 1.38344 * 119.98802 * 180.02562 * 19 18 16 21 21 Br 1.89109 * 120.00866 * 179.97438 * 20 19 18 22 22 C 1.38301 * 119.98295 * 0.02562 * 20 19 18 23 23 C 1.38243 * 119.99131 * 359.97438 * 22 20 19 24 24 C 1.38222 * 120.00434 * 359.73276 * 23 22 20 25 25 C 1.53778 * 113.61790 * 254.40940 * 13 12 10 26 26 H 1.08996 * 109.47192 * 274.59720 * 1 2 3 27 27 H 1.09003 * 109.46727 * 34.59433 * 1 2 3 28 28 H 1.08995 * 109.47212 * 154.59232 * 1 2 3 29 29 H 1.08004 * 125.56289 * 0.04738 * 3 2 1 30 30 H 1.09002 * 109.47333 * 124.97803 * 5 4 3 31 31 H 0.96696 * 113.99965 * 59.99989 * 6 5 4 32 32 H 1.48500 * 109.99856 * 58.67835 * 7 5 4 33 33 H 1.48504 * 110.00094 * 180.02562 * 7 5 4 34 34 H 1.08001 * 126.45581 * 180.25997 * 8 4 3 35 35 H 0.97002 * 120.00239 * 355.24715 * 12 10 9 36 36 H 1.09004 * 113.61551 * 203.66771 * 15 13 12 37 37 H 1.09003 * 113.61329 * 334.48545 * 15 13 12 38 38 H 1.08000 * 120.00772 * 0.02562 * 19 18 16 39 39 H 1.08003 * 120.00628 * 180.02562 * 22 20 19 40 40 H 1.07996 * 119.99600 * 180.02562 * 23 22 20 41 41 H 1.07997 * 119.99211 * 180.27346 * 24 23 22 42 42 H 1.09000 * 113.61051 * 25.43866 * 25 13 12 43 43 H 1.09004 * 113.61626 * 156.33288 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2555 1.1008 0.0000 4 6 3.5522 0.7091 -0.0006 5 6 4.7537 1.6187 -0.0002 6 8 5.4772 1.4527 -1.2214 7 14 4.1929 3.3886 0.1536 8 6 3.5779 -0.6890 0.0049 9 6 2.2678 -1.1183 -0.0005 10 6 1.8123 -2.5125 -0.0006 11 8 0.6257 -2.7650 -0.0975 12 7 2.7078 -3.5140 0.1067 13 6 2.2468 -4.9001 0.2176 14 1 1.2636 -5.0560 -0.2265 15 6 3.2941 -5.9350 -0.2261 16 6 3.7988 -5.9306 1.2265 17 1 4.5662 -5.1810 1.4199 18 6 4.1733 -7.2972 1.7396 19 6 5.4644 -7.5455 2.1653 20 6 5.8081 -8.8002 2.6358 21 35 7.5749 -9.1408 3.2177 22 6 4.8596 -9.8057 2.6796 23 6 3.5682 -9.5565 2.2536 24 6 3.2237 -8.3010 1.7892 25 6 2.3824 -5.4830 1.6342 26 1 -0.3633 0.0824 1.0243 27 1 -0.3633 0.8460 -0.5835 28 1 -0.3633 -0.9282 -0.4409 29 1 1.9082 2.1235 0.0007 30 1 5.3992 1.3677 0.8415 31 1 4.9634 1.6590 -2.0141 32 1 3.4120 3.5671 1.4040 33 1 5.3686 4.2958 0.1545 34 1 4.4583 -1.3146 0.0099 35 1 3.6575 -3.3166 0.1145 36 1 2.8632 -6.8872 -0.5357 37 1 4.0173 -5.5449 -0.9422 38 1 6.2050 -6.7601 2.1306 39 1 5.1274 -10.7853 3.0472 40 1 2.8273 -10.3415 2.2881 41 1 2.2138 -8.1053 1.4606 42 1 2.3708 -4.7277 2.4200 43 1 1.7026 -6.3117 1.8323 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:36:38 Heat of formation + Delta-G solvation = 41.333523 kcal Electronic energy + Delta-G solvation = -26836.371530 eV Core-core repulsion = 22896.049120 eV Total energy + Delta-G solvation = -3940.322410 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 2.05 seconds Orbital eigenvalues (eV) -42.59864 -41.53926 -40.12234 -38.76119 -37.67432 -34.96525 -33.81122 -33.18161 -32.23689 -30.77870 -30.08469 -28.38856 -26.87084 -26.50590 -25.68398 -24.09143 -23.55803 -22.48575 -21.29897 -20.64901 -20.03864 -18.89457 -18.21405 -17.67986 -17.13559 -16.79485 -16.70280 -16.51641 -16.22362 -15.85376 -15.57435 -15.52216 -15.15172 -15.08449 -14.71573 -14.56812 -14.44290 -14.34122 -14.05782 -13.63522 -13.55940 -13.49843 -13.32857 -13.17915 -12.98895 -12.42465 -12.22784 -12.06991 -12.03076 -11.92779 -11.60903 -11.42722 -11.18154 -11.04918 -10.33274 -10.19101 -9.91008 -9.72753 -9.65298 -9.28720 -5.04278 0.04484 0.21119 0.40632 0.64980 1.34945 1.48103 1.50423 1.68057 2.00313 2.23454 2.32120 2.50328 3.29150 3.48392 3.52404 3.57795 3.66701 3.74753 3.77443 3.82570 3.88749 3.95976 3.99928 4.16428 4.18676 4.23282 4.32815 4.34230 4.51046 4.55690 4.59001 4.62697 4.64068 4.72219 4.73535 4.81756 4.85912 4.88323 4.98653 5.15305 5.15848 5.27543 5.38731 5.51015 5.64315 5.74394 5.87006 6.08952 6.39636 6.68197 7.11932 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.403 5.403 3 C 0.028 3.972 4 C -0.208 4.208 5 C -0.030 4.030 6 O -0.543 6.543 7 Si 0.683 3.317 8 C -0.112 4.112 9 C -0.055 4.055 10 C 0.596 3.404 11 O -0.545 6.545 12 N -0.702 5.702 13 C 0.123 3.877 14 H 0.108 0.892 15 C -0.134 4.134 16 C -0.074 4.074 17 H 0.100 0.900 18 C -0.065 4.065 19 C -0.088 4.088 20 C -0.088 4.088 21 Br -0.050 7.050 22 C -0.095 4.095 23 C -0.110 4.110 24 C -0.102 4.102 25 C -0.144 4.144 26 H 0.077 0.923 27 H 0.086 0.914 28 H 0.110 0.890 29 H 0.174 0.826 30 H 0.111 0.889 31 H 0.377 0.623 32 H -0.257 1.257 33 H -0.256 1.256 34 H 0.145 0.855 35 H 0.404 0.596 36 H 0.100 0.900 37 H 0.080 0.920 38 H 0.132 0.868 39 H 0.132 0.868 40 H 0.133 0.867 41 H 0.130 0.870 42 H 0.076 0.924 43 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.575 1.158 -1.980 3.448 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.075 5.075 3 C -0.109 4.109 4 C -0.214 4.214 5 C -0.142 4.142 6 O -0.348 6.348 7 Si 0.585 3.415 8 C -0.138 4.138 9 C -0.168 4.168 10 C 0.384 3.616 11 O -0.424 6.424 12 N -0.353 5.353 13 C 0.017 3.983 14 H 0.126 0.874 15 C -0.172 4.172 16 C -0.093 4.093 17 H 0.118 0.882 18 C -0.066 4.066 19 C -0.107 4.107 20 C -0.167 4.167 21 Br 0.036 6.964 22 C -0.115 4.115 23 C -0.129 4.129 24 C -0.120 4.120 25 C -0.182 4.182 26 H 0.096 0.904 27 H 0.105 0.895 28 H 0.129 0.871 29 H 0.191 0.809 30 H 0.128 0.872 31 H 0.225 0.775 32 H -0.182 1.182 33 H -0.180 1.180 34 H 0.162 0.838 35 H 0.240 0.760 36 H 0.119 0.881 37 H 0.099 0.901 38 H 0.150 0.850 39 H 0.150 0.850 40 H 0.151 0.849 41 H 0.148 0.852 42 H 0.095 0.905 43 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -2.675 1.382 -0.923 3.149 hybrid contribution 0.321 -0.376 0.329 0.594 sum -2.354 1.006 -0.594 2.628 Atomic orbital electron populations 1.22442 0.75505 1.06276 1.04071 1.43812 1.07033 1.04662 1.51994 1.21869 0.90051 0.91683 1.07259 1.19783 0.93729 0.94859 1.13064 1.24314 0.92812 1.07346 0.89753 1.86484 1.41198 1.91986 1.15158 0.95105 0.83497 0.75934 0.86982 1.21185 0.94246 0.94670 1.03726 1.19967 0.90306 0.87530 1.19017 1.16941 0.85498 0.83480 0.75641 1.90785 1.16302 1.84701 1.50597 1.45285 1.09813 1.05413 1.74794 1.21843 0.99549 0.79921 0.96972 0.87390 1.23425 0.98270 0.99661 0.95873 1.21671 0.97745 0.93570 0.96266 0.88154 1.19682 0.92889 0.95457 0.98556 1.21030 0.96556 0.95368 0.97789 1.21844 0.92137 0.96997 1.05715 1.96786 1.14850 1.96037 1.88747 1.21174 0.92744 0.98611 0.98976 1.21201 0.95930 0.97276 0.98452 1.21177 0.99603 0.92655 0.98595 1.23636 0.95844 1.01238 0.97524 0.90399 0.89493 0.87128 0.80938 0.87212 0.77543 1.18222 1.18030 0.83761 0.76004 0.88114 0.90144 0.85044 0.84960 0.84915 0.85175 0.90516 0.88458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.06 10.77 59.85 0.64 0.58 16 2 N -0.40 -0.25 3.16 -120.23 -0.38 -0.63 16 3 C 0.03 -0.02 9.94 -16.91 -0.17 -0.19 16 4 C -0.21 0.00 5.43 -105.02 -0.57 -0.57 16 5 C -0.03 0.01 3.02 36.01 0.11 0.12 16 6 O -0.54 -0.08 12.88 -35.23 -0.45 -0.53 16 7 Si 0.68 -1.02 30.60 -169.99 -5.20 -6.22 16 8 C -0.11 -0.05 10.29 -39.12 -0.40 -0.45 16 9 C -0.05 -0.08 6.89 -81.98 -0.56 -0.64 16 10 C 0.60 1.17 7.77 -12.86 -0.10 1.07 16 11 O -0.54 -2.57 14.16 5.19 0.07 -2.50 16 12 N -0.70 0.58 5.25 -54.33 -0.29 0.29 16 13 C 0.12 -0.16 4.32 -67.12 -0.29 -0.45 16 14 H 0.11 0.01 7.46 -51.93 -0.39 -0.37 16 15 C -0.13 0.36 7.29 -25.92 -0.19 0.17 16 16 C -0.07 0.17 3.87 -90.82 -0.35 -0.18 16 17 H 0.10 -0.28 8.09 -51.93 -0.42 -0.70 16 18 C -0.06 0.05 5.29 -104.63 -0.55 -0.50 16 19 C -0.09 -0.02 9.45 -39.56 -0.37 -0.40 16 20 C -0.09 -0.09 6.22 -39.52 -0.25 -0.34 16 21 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 22 C -0.10 -0.03 9.79 -39.56 -0.39 -0.41 16 23 C -0.11 0.09 10.05 -39.59 -0.40 -0.31 16 24 C -0.10 0.12 8.63 -39.58 -0.34 -0.23 16 25 C -0.14 0.25 7.27 -25.78 -0.19 0.06 16 26 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 27 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 28 H 0.11 0.08 5.97 -51.93 -0.31 -0.23 16 29 H 0.17 -0.61 6.21 -52.48 -0.33 -0.94 16 30 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 31 H 0.38 -1.34 8.70 45.56 0.40 -0.95 16 32 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 33 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 34 H 0.14 -0.18 7.45 -52.49 -0.39 -0.57 16 35 H 0.40 -1.12 7.60 -40.82 -0.31 -1.43 16 36 H 0.10 -0.30 7.73 -51.93 -0.40 -0.70 16 37 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 38 H 0.13 -0.10 8.05 -52.49 -0.42 -0.52 16 39 H 0.13 -0.10 8.06 -52.48 -0.42 -0.52 16 40 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 41 H 0.13 -0.37 6.65 -52.49 -0.35 -0.72 16 42 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.10 -0.22 6.32 -51.93 -0.33 -0.55 16 LS Contribution 377.13 15.07 5.68 5.68 Total: 0.00 -8.03 377.13 -12.62 -20.65 By element: Atomic # 1 Polarization: -6.33 SS G_CDS: -5.40 Total: -11.72 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -4.37 Total: -2.66 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -0.67 Total: -0.33 kcal Atomic # 8 Polarization: -2.64 SS G_CDS: -0.38 Total: -3.02 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.20 Total: -6.22 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -8.03 -12.62 -20.65 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.982 kcal (2) G-P(sol) polarization free energy of solvation -8.026 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.623 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.649 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.334 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.05 seconds