Wall clock time and date at job start Sun Mar 7 2021 01:36:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.37652 * 125.67958 * 2 1 4 4 C 1.46677 * 126.22945 * 359.97438 * 3 2 1 5 5 O 1.21690 * 120.00330 * 5.37736 * 4 3 2 6 6 N 1.34777 * 119.99869 * 185.37854 * 4 3 2 7 7 C 1.46499 * 120.00041 * 185.12016 * 6 4 3 8 8 H 1.08996 * 112.85022 * 25.33396 * 7 6 4 9 9 C 1.53784 * 113.61424 * 156.53302 * 7 6 4 10 10 C 1.53773 * 87.08597 * 89.11237 * 9 7 6 11 11 H 1.08998 * 113.61669 * 270.88819 * 10 9 7 12 12 C 1.50698 * 113.61594 * 140.06414 * 10 9 7 13 13 C 1.38201 * 119.99242 * 299.72701 * 12 10 9 14 14 C 1.38352 * 119.98915 * 179.74663 * 13 12 10 15 15 Br 1.89098 * 120.01099 * 180.27264 * 14 13 12 16 16 C 1.38311 * 119.97575 * 0.52757 * 14 13 12 17 17 C 1.38233 * 119.98941 * 359.72609 * 16 14 13 18 18 C 1.38221 * 120.01387 * 0.02562 * 17 16 14 19 19 C 1.53778 * 113.61404 * 254.13420 * 7 6 4 20 20 C 1.37868 * 107.53561 * 179.97438 * 3 2 1 21 21 C 1.39840 * 107.08540 * 359.78147 * 20 3 2 22 22 C 1.35458 * 107.86214 * 0.35842 * 21 20 3 23 23 C 1.50695 * 125.56032 * 179.89919 * 22 21 20 24 24 O 1.42901 * 109.46998 * 209.69057 * 23 22 21 25 25 Si 1.86302 * 109.47532 * 329.69280 * 23 22 21 26 26 H 1.09008 * 109.46913 * 264.21362 * 1 2 3 27 27 H 1.08997 * 109.47385 * 24.21298 * 1 2 3 28 28 H 1.09003 * 109.47209 * 144.21736 * 1 2 3 29 29 H 0.97005 * 119.99783 * 5.11897 * 6 4 3 30 30 H 1.09004 * 113.61316 * 203.66563 * 9 7 6 31 31 H 1.09011 * 113.61144 * 334.56098 * 9 7 6 32 32 H 1.08001 * 120.00823 * 0.02562 * 13 12 10 33 33 H 1.07995 * 120.00019 * 179.74667 * 16 14 13 34 34 H 1.08004 * 119.99578 * 179.97438 * 17 16 14 35 35 H 1.07995 * 119.99070 * 179.97438 * 18 17 16 36 36 H 1.09003 * 113.61384 * 25.43407 * 19 7 6 37 37 H 1.09003 * 113.61604 * 156.33291 * 19 7 6 38 38 H 1.08003 * 126.46097 * 179.97438 * 20 3 2 39 39 H 1.08001 * 126.06904 * 180.21893 * 21 20 3 40 40 H 1.09002 * 109.47034 * 89.69299 * 23 22 21 41 41 H 0.96698 * 113.99658 * 60.00276 * 24 23 22 42 42 H 1.48505 * 109.99657 * 58.67769 * 25 23 22 43 43 H 1.48499 * 110.00134 * 180.02562 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8123 2.5124 -0.0005 5 8 0.6260 2.7651 0.0977 6 7 2.7078 3.5138 -0.1099 7 6 2.2667 4.9063 0.0021 8 1 1.3515 5.0149 0.5840 9 6 3.3842 5.8743 0.4252 10 6 3.7004 6.0389 -1.0707 11 1 4.4205 5.3124 -1.4473 12 6 4.0364 7.4541 -1.4646 13 6 3.1105 8.4624 -1.2749 14 6 3.4210 9.7626 -1.6317 15 35 2.1573 11.1439 -1.3652 16 6 4.6539 10.0507 -2.1882 17 6 5.5774 9.0406 -2.3824 18 6 5.2687 7.7427 -2.0211 19 6 2.2341 5.6521 -1.3423 20 6 3.5779 0.6888 0.0006 21 6 3.5521 -0.7093 0.0060 22 6 2.2554 -1.1010 0.0006 23 6 1.7709 -2.5279 0.0015 24 8 0.5127 -2.6041 -0.6719 25 14 3.0113 -3.6057 -0.8763 26 1 -0.3633 -0.1036 1.0225 27 1 -0.3634 0.9372 -0.4215 28 1 -0.3634 -0.8337 -0.6009 29 1 3.6443 3.3124 -0.2627 30 1 3.0169 6.7859 0.8967 31 1 4.1845 5.3969 0.9907 32 1 2.1463 8.2362 -0.8440 33 1 4.8952 11.0648 -2.4707 34 1 6.5401 9.2655 -2.8174 35 1 5.9903 6.9538 -2.1733 36 1 2.1066 4.9955 -2.2030 37 1 1.5530 6.5030 -1.3533 38 1 4.4584 1.3144 0.0004 39 1 4.4132 -1.3612 0.0112 40 1 1.6542 -2.8713 1.0294 41 1 0.5418 -2.3132 -1.5936 42 1 4.3323 -3.5103 -0.2045 43 1 2.5448 -5.0154 -0.8827 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:36:42 Heat of formation + Delta-G solvation = 43.201491 kcal Electronic energy + Delta-G solvation = -26933.753530 eV Core-core repulsion = 22993.512121 eV Total energy + Delta-G solvation = -3940.241409 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 2.19 seconds Orbital eigenvalues (eV) -42.61896 -41.54265 -40.12994 -38.75473 -37.85926 -34.91228 -33.69790 -33.32540 -32.09096 -31.11298 -30.25440 -27.56198 -27.18604 -26.85369 -25.94889 -23.77888 -23.20303 -22.51846 -21.59924 -20.56450 -20.17208 -18.87249 -18.30004 -17.96453 -17.18801 -16.90648 -16.61854 -16.32927 -16.09688 -15.96653 -15.52286 -15.43188 -15.08362 -14.89468 -14.79168 -14.54387 -14.49095 -14.40317 -14.32375 -13.72064 -13.61555 -13.48650 -13.16369 -13.03777 -12.95944 -12.47099 -12.22034 -12.06454 -12.03948 -11.98555 -11.60310 -11.37088 -11.21223 -11.06489 -10.69319 -10.17759 -9.89311 -9.74913 -9.66006 -9.10803 -5.07117 0.05412 0.20143 0.39895 0.64984 1.07527 1.47114 1.66144 1.66988 1.94525 2.32289 2.36506 2.50605 3.13412 3.30049 3.49221 3.51586 3.56653 3.69574 3.74944 3.82567 3.95136 3.99222 4.06638 4.18402 4.29601 4.32214 4.34469 4.43049 4.47799 4.50958 4.57814 4.60756 4.71172 4.81689 4.84097 4.86284 4.91151 4.97212 5.01035 5.12651 5.15540 5.27370 5.41520 5.51244 5.68782 5.74512 5.96594 6.12767 6.29525 6.43508 7.15643 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 N -0.389 5.389 3 C -0.053 4.053 4 C 0.594 3.406 5 O -0.543 6.543 6 N -0.702 5.702 7 C 0.124 3.876 8 H 0.106 0.894 9 C -0.135 4.135 10 C -0.074 4.074 11 H 0.102 0.898 12 C -0.065 4.065 13 C -0.089 4.089 14 C -0.087 4.087 15 Br -0.049 7.049 16 C -0.095 4.095 17 C -0.110 4.110 18 C -0.101 4.101 19 C -0.144 4.144 20 C -0.135 4.135 21 C -0.204 4.204 22 C 0.015 3.985 23 C -0.050 4.050 24 O -0.542 6.542 25 Si 0.724 3.276 26 H 0.073 0.927 27 H 0.101 0.899 28 H 0.103 0.897 29 H 0.404 0.596 30 H 0.100 0.900 31 H 0.080 0.920 32 H 0.133 0.867 33 H 0.132 0.868 34 H 0.133 0.867 35 H 0.129 0.871 36 H 0.077 0.923 37 H 0.096 0.904 38 H 0.146 0.854 39 H 0.147 0.853 40 H 0.119 0.881 41 H 0.381 0.619 42 H -0.252 1.252 43 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.483 -1.235 -2.850 5.454 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.061 5.061 3 C -0.167 4.167 4 C 0.382 3.618 5 O -0.421 6.421 6 N -0.353 5.353 7 C 0.019 3.981 8 H 0.124 0.876 9 C -0.173 4.173 10 C -0.092 4.092 11 H 0.120 0.880 12 C -0.066 4.066 13 C -0.108 4.108 14 C -0.167 4.167 15 Br 0.036 6.964 16 C -0.115 4.115 17 C -0.129 4.129 18 C -0.119 4.119 19 C -0.182 4.182 20 C -0.161 4.161 21 C -0.228 4.228 22 C -0.103 4.103 23 C -0.160 4.160 24 O -0.347 6.347 25 Si 0.623 3.377 26 H 0.092 0.908 27 H 0.119 0.881 28 H 0.122 0.878 29 H 0.239 0.761 30 H 0.118 0.882 31 H 0.098 0.902 32 H 0.151 0.849 33 H 0.150 0.850 34 H 0.150 0.850 35 H 0.147 0.853 36 H 0.096 0.904 37 H 0.114 0.886 38 H 0.163 0.837 39 H 0.165 0.835 40 H 0.137 0.863 41 H 0.229 0.771 42 H -0.176 1.176 43 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 3.074 -1.401 -2.003 3.927 hybrid contribution 0.580 0.096 0.490 0.766 sum 3.654 -1.305 -1.513 4.164 Atomic orbital electron populations 1.22614 0.75434 1.06209 1.04478 1.43767 1.07038 1.03953 1.51355 1.20002 0.90532 0.87430 1.18718 1.16961 0.85487 0.83484 0.75830 1.90807 1.16165 1.84726 1.50402 1.45279 1.11302 1.04860 1.73893 1.21830 0.98950 0.79647 0.97718 0.87613 1.23441 0.98502 0.99818 0.95568 1.21674 0.97906 0.92921 0.96687 0.88004 1.19683 0.93783 0.94743 0.98412 1.20975 0.99979 0.90563 0.99331 1.21831 0.95429 0.93503 1.05903 1.96789 1.55931 1.47653 1.96004 1.21172 0.92007 1.00392 0.97950 1.21207 0.99526 0.92571 0.99622 1.21226 0.96232 0.96945 0.97486 1.23627 0.95556 1.00665 0.98396 1.21274 0.94353 0.95166 1.05306 1.20646 0.95069 0.95423 1.11691 1.21082 0.90939 0.89222 1.09079 1.24992 0.93958 0.94615 1.02435 1.86493 1.30181 1.88840 1.29227 0.94019 0.76349 0.77683 0.89636 0.90828 0.88060 0.87846 0.76065 0.88176 0.90158 0.84884 0.84971 0.84952 0.85318 0.90398 0.88586 0.83660 0.83536 0.86336 0.77104 1.17602 1.17746 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.05 10.22 59.84 0.61 0.66 16 2 N -0.39 -0.64 3.16 -115.62 -0.37 -1.01 16 3 C -0.05 -0.09 6.88 -81.98 -0.56 -0.66 16 4 C 0.59 1.35 7.77 -12.85 -0.10 1.25 16 5 O -0.54 -2.94 14.28 5.20 0.07 -2.86 16 6 N -0.70 0.65 5.24 -54.33 -0.28 0.36 16 7 C 0.12 -0.14 4.26 -67.12 -0.29 -0.42 16 8 H 0.11 0.07 7.57 -51.93 -0.39 -0.33 16 9 C -0.14 0.36 7.29 -25.92 -0.19 0.17 16 10 C -0.07 0.19 3.87 -90.82 -0.35 -0.16 16 11 H 0.10 -0.37 8.09 -51.93 -0.42 -0.79 16 12 C -0.07 0.07 5.29 -104.63 -0.55 -0.49 16 13 C -0.09 0.01 8.37 -39.55 -0.33 -0.33 16 14 C -0.09 -0.07 6.22 -39.51 -0.25 -0.32 16 15 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.35 16 16 C -0.10 -0.01 9.79 -39.56 -0.39 -0.40 16 17 C -0.11 0.10 10.05 -39.59 -0.40 -0.29 16 18 C -0.10 0.13 9.71 -39.58 -0.38 -0.26 16 19 C -0.14 0.21 7.27 -25.78 -0.19 0.03 16 20 C -0.13 0.01 10.35 -39.12 -0.40 -0.40 16 21 C -0.20 -0.02 9.37 -39.97 -0.37 -0.40 16 22 C 0.02 0.01 6.14 -81.95 -0.50 -0.50 16 23 C -0.05 0.05 2.99 36.00 0.11 0.15 16 24 O -0.54 0.61 10.11 -35.23 -0.36 0.25 16 25 Si 0.72 -1.58 31.30 -169.99 -5.32 -6.90 16 26 H 0.07 0.11 8.14 -51.92 -0.42 -0.32 16 27 H 0.10 0.22 6.12 -51.93 -0.32 -0.10 16 28 H 0.10 -0.09 5.25 -51.93 -0.27 -0.36 16 29 H 0.40 -1.35 7.65 -40.82 -0.31 -1.66 16 30 H 0.10 -0.25 7.73 -51.93 -0.40 -0.65 16 31 H 0.08 -0.26 8.14 -51.92 -0.42 -0.68 16 32 H 0.13 -0.12 6.65 -52.49 -0.35 -0.47 16 33 H 0.13 -0.12 8.06 -52.49 -0.42 -0.55 16 34 H 0.13 -0.38 8.06 -52.48 -0.42 -0.80 16 35 H 0.13 -0.41 8.05 -52.49 -0.42 -0.83 16 36 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.10 -0.14 6.31 -51.93 -0.33 -0.47 16 38 H 0.15 -0.42 7.49 -52.48 -0.39 -0.81 16 39 H 0.15 -0.18 6.63 -52.49 -0.35 -0.53 16 40 H 0.12 -0.05 7.96 -51.93 -0.41 -0.47 16 41 H 0.38 -1.74 8.31 45.56 0.38 -1.36 16 42 H -0.25 0.05 6.76 56.52 0.38 0.43 16 43 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 LS Contribution 371.85 15.07 5.60 5.60 Total: 0.00 -7.49 371.85 -12.81 -20.29 By element: Atomic # 1 Polarization: -5.70 SS G_CDS: -5.32 Total: -11.03 kcal Atomic # 6 Polarization: 2.19 SS G_CDS: -4.54 Total: -2.35 kcal Atomic # 7 Polarization: 0.00 SS G_CDS: -0.65 Total: -0.65 kcal Atomic # 8 Polarization: -2.33 SS G_CDS: -0.28 Total: -2.61 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.32 Total: -6.90 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -7.49 -12.81 -20.29 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.492 kcal (2) G-P(sol) polarization free energy of solvation -7.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.007 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.806 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.291 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.19 seconds