Wall clock time and date at job start Sun Mar 7 2021 01:36:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.37652 * 125.67958 * 2 1 4 4 C 1.46677 * 126.22945 * 359.97438 * 3 2 1 5 5 O 1.21690 * 120.00330 * 5.37736 * 4 3 2 6 6 N 1.34777 * 119.99869 * 185.37854 * 4 3 2 7 7 C 1.46499 * 120.00041 * 185.12016 * 6 4 3 8 8 H 1.08996 * 112.85022 * 25.33396 * 7 6 4 9 9 C 1.53784 * 113.61424 * 156.53302 * 7 6 4 10 10 C 1.53773 * 87.08597 * 89.11237 * 9 7 6 11 11 H 1.08998 * 113.61669 * 270.88819 * 10 9 7 12 12 C 1.50698 * 113.61594 * 140.06414 * 10 9 7 13 13 C 1.38201 * 119.99242 * 299.72701 * 12 10 9 14 14 C 1.38352 * 119.98915 * 179.74663 * 13 12 10 15 15 Br 1.89098 * 120.01099 * 180.27264 * 14 13 12 16 16 C 1.38311 * 119.97575 * 0.52757 * 14 13 12 17 17 C 1.38233 * 119.98941 * 359.72609 * 16 14 13 18 18 C 1.38221 * 120.01387 * 0.02562 * 17 16 14 19 19 C 1.53778 * 113.61404 * 254.13420 * 7 6 4 20 20 C 1.37868 * 107.53561 * 179.97438 * 3 2 1 21 21 C 1.39840 * 107.08540 * 359.78147 * 20 3 2 22 22 C 1.35458 * 107.86214 * 0.35842 * 21 20 3 23 23 C 1.50695 * 125.56032 * 179.89919 * 22 21 20 24 24 O 1.42901 * 109.46998 * 209.69057 * 23 22 21 25 25 Si 1.86302 * 109.47532 * 329.69280 * 23 22 21 26 26 H 1.09008 * 109.46913 * 264.21362 * 1 2 3 27 27 H 1.08997 * 109.47385 * 24.21298 * 1 2 3 28 28 H 1.09003 * 109.47209 * 144.21736 * 1 2 3 29 29 H 0.97005 * 119.99783 * 5.11897 * 6 4 3 30 30 H 1.09004 * 113.61316 * 203.66563 * 9 7 6 31 31 H 1.09011 * 113.61144 * 334.56098 * 9 7 6 32 32 H 1.08001 * 120.00823 * 0.02562 * 13 12 10 33 33 H 1.07995 * 120.00019 * 179.74667 * 16 14 13 34 34 H 1.08004 * 119.99578 * 179.97438 * 17 16 14 35 35 H 1.07995 * 119.99070 * 179.97438 * 18 17 16 36 36 H 1.09003 * 113.61384 * 25.43407 * 19 7 6 37 37 H 1.09003 * 113.61604 * 156.33291 * 19 7 6 38 38 H 1.08003 * 126.46097 * 179.97438 * 20 3 2 39 39 H 1.08001 * 126.06904 * 180.21893 * 21 20 3 40 40 H 1.09002 * 109.47034 * 89.69299 * 23 22 21 41 41 H 0.96698 * 113.99658 * 60.00276 * 24 23 22 42 42 H 1.48505 * 109.99657 * 58.67769 * 25 23 22 43 43 H 1.48499 * 110.00134 * 180.02562 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8123 2.5124 -0.0005 5 8 0.6260 2.7651 0.0977 6 7 2.7078 3.5138 -0.1099 7 6 2.2667 4.9063 0.0021 8 1 1.3515 5.0149 0.5840 9 6 3.3842 5.8743 0.4252 10 6 3.7004 6.0389 -1.0707 11 1 4.4205 5.3124 -1.4473 12 6 4.0364 7.4541 -1.4646 13 6 3.1105 8.4624 -1.2749 14 6 3.4210 9.7626 -1.6317 15 35 2.1573 11.1439 -1.3652 16 6 4.6539 10.0507 -2.1882 17 6 5.5774 9.0406 -2.3824 18 6 5.2687 7.7427 -2.0211 19 6 2.2341 5.6521 -1.3423 20 6 3.5779 0.6888 0.0006 21 6 3.5521 -0.7093 0.0060 22 6 2.2554 -1.1010 0.0006 23 6 1.7709 -2.5279 0.0015 24 8 0.5127 -2.6041 -0.6719 25 14 3.0113 -3.6057 -0.8763 26 1 -0.3633 -0.1036 1.0225 27 1 -0.3634 0.9372 -0.4215 28 1 -0.3634 -0.8337 -0.6009 29 1 3.6443 3.3124 -0.2627 30 1 3.0169 6.7859 0.8967 31 1 4.1845 5.3969 0.9907 32 1 2.1463 8.2362 -0.8440 33 1 4.8952 11.0648 -2.4707 34 1 6.5401 9.2655 -2.8174 35 1 5.9903 6.9538 -2.1733 36 1 2.1066 4.9955 -2.2030 37 1 1.5530 6.5030 -1.3533 38 1 4.4584 1.3144 0.0004 39 1 4.4132 -1.3612 0.0112 40 1 1.6542 -2.8713 1.0294 41 1 0.5418 -2.3132 -1.5936 42 1 4.3323 -3.5103 -0.2045 43 1 2.5448 -5.0154 -0.8827 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:36:41 Heat of formation + Delta-G solvation = 48.158988 kcal Electronic energy + Delta-G solvation = -26933.538556 eV Core-core repulsion = 22993.512121 eV Total energy + Delta-G solvation = -3940.026435 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.63294 -41.46481 -40.14797 -38.74658 -37.78469 -34.94570 -33.71612 -33.29495 -32.03790 -31.07398 -30.22671 -27.57454 -27.18270 -26.71758 -25.86833 -23.72057 -23.17873 -22.45449 -21.59189 -20.58251 -20.08410 -18.86485 -18.23288 -17.90433 -17.18346 -16.93042 -16.56071 -16.25174 -16.06623 -15.94417 -15.49510 -15.41793 -15.05556 -14.88265 -14.71143 -14.51083 -14.46635 -14.37703 -14.25258 -13.69846 -13.49234 -13.42740 -13.21690 -13.01189 -12.90600 -12.35415 -12.17824 -12.02081 -12.01787 -11.87828 -11.54475 -11.32447 -11.19588 -11.17768 -10.66052 -10.19255 -9.82662 -9.76442 -9.60660 -9.11892 -4.90242 0.12136 0.28214 0.35098 0.64746 1.17663 1.50697 1.71511 1.76235 2.03464 2.28687 2.33507 2.59190 3.28296 3.42838 3.55553 3.63398 3.66049 3.73791 3.85220 3.94919 3.98950 4.07148 4.24445 4.30587 4.31826 4.32797 4.40742 4.43127 4.54896 4.57282 4.68101 4.75094 4.75587 4.83331 4.95875 4.98811 5.01479 5.04577 5.11439 5.15523 5.23541 5.37759 5.48798 5.61128 5.72296 5.86396 5.97309 6.11817 6.46489 6.56643 7.11829 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.402 5.402 3 C -0.081 4.081 4 C 0.589 3.411 5 O -0.585 6.585 6 N -0.685 5.685 7 C 0.119 3.881 8 H 0.083 0.917 9 C -0.124 4.124 10 C -0.062 4.062 11 H 0.122 0.878 12 C -0.068 4.068 13 C -0.099 4.099 14 C -0.103 4.103 15 Br -0.064 7.064 16 C -0.108 4.108 17 C -0.114 4.114 18 C -0.101 4.101 19 C -0.144 4.144 20 C -0.122 4.122 21 C -0.213 4.213 22 C 0.014 3.986 23 C -0.059 4.059 24 O -0.554 6.554 25 Si 0.814 3.186 26 H 0.063 0.937 27 H 0.085 0.915 28 H 0.120 0.880 29 H 0.418 0.582 30 H 0.097 0.903 31 H 0.094 0.906 32 H 0.134 0.866 33 H 0.136 0.864 34 H 0.152 0.848 35 H 0.153 0.847 36 H 0.070 0.930 37 H 0.091 0.909 38 H 0.175 0.825 39 H 0.163 0.837 40 H 0.112 0.888 41 H 0.396 0.604 42 H -0.273 1.273 43 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.780 -1.924 -3.414 7.831 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.075 5.075 3 C -0.194 4.194 4 C 0.378 3.622 5 O -0.467 6.467 6 N -0.337 5.337 7 C 0.014 3.986 8 H 0.101 0.899 9 C -0.162 4.162 10 C -0.080 4.080 11 H 0.140 0.860 12 C -0.069 4.069 13 C -0.119 4.119 14 C -0.183 4.183 15 Br 0.021 6.979 16 C -0.128 4.128 17 C -0.133 4.133 18 C -0.119 4.119 19 C -0.182 4.182 20 C -0.148 4.148 21 C -0.236 4.236 22 C -0.105 4.105 23 C -0.167 4.167 24 O -0.362 6.362 25 Si 0.716 3.284 26 H 0.081 0.919 27 H 0.104 0.896 28 H 0.138 0.862 29 H 0.256 0.744 30 H 0.116 0.884 31 H 0.112 0.888 32 H 0.151 0.849 33 H 0.154 0.846 34 H 0.170 0.830 35 H 0.171 0.829 36 H 0.088 0.912 37 H 0.110 0.890 38 H 0.193 0.807 39 H 0.180 0.820 40 H 0.129 0.871 41 H 0.246 0.754 42 H -0.199 1.199 43 H -0.223 1.223 Dipole moment (debyes) X Y Z Total from point charges 5.399 -2.046 -2.579 6.323 hybrid contribution -0.134 0.264 0.678 0.740 sum 5.264 -1.781 -1.901 5.874 Atomic orbital electron populations 1.22528 0.75734 1.06007 1.03970 1.43909 1.07145 1.04449 1.51979 1.20163 0.91430 0.87200 1.20579 1.17200 0.85245 0.84306 0.75423 1.90784 1.17938 1.85329 1.52680 1.45147 1.11609 1.04332 1.72582 1.21828 0.98949 0.79862 0.97977 0.89903 1.23374 0.97958 0.99093 0.95795 1.21672 0.97292 0.92547 0.96462 0.85954 1.19847 0.93805 0.95035 0.98227 1.21087 1.00463 0.90654 0.99651 1.21939 0.95665 0.93526 1.07123 1.96759 1.56598 1.48382 1.96124 1.21352 0.92082 1.01148 0.98235 1.21494 1.00038 0.92492 0.99255 1.21552 0.96397 0.97478 0.96480 1.23595 0.96657 1.00291 0.97681 1.21666 0.94434 0.95483 1.03255 1.20923 0.95284 0.95835 1.11602 1.21399 0.91213 0.89435 1.08419 1.25235 0.94632 0.94259 1.02618 1.86455 1.30275 1.88874 1.30572 0.92947 0.73491 0.73970 0.88022 0.91878 0.89624 0.86217 0.74361 0.88441 0.88750 0.84870 0.84593 0.83015 0.82898 0.91169 0.89045 0.80729 0.82006 0.87118 0.75359 1.19864 1.22315 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.20 10.22 127.77 1.31 1.51 16 2 N -0.40 -1.58 3.16 -519.71 -1.64 -3.22 16 3 C -0.08 -0.29 6.88 40.35 0.28 -0.02 16 4 C 0.59 3.23 7.77 86.45 0.67 3.90 16 5 O -0.59 -7.70 14.28 -4.32 -0.06 -7.76 16 6 N -0.69 1.38 5.24 -444.01 -2.33 -0.95 16 7 C 0.12 -0.20 4.26 45.52 0.19 -0.01 16 8 H 0.08 0.27 7.57 -2.39 -0.02 0.26 16 9 C -0.12 0.75 7.29 31.12 0.23 0.97 16 10 C -0.06 0.39 3.87 -10.92 -0.04 0.35 16 11 H 0.12 -1.24 8.09 -2.39 -0.02 -1.26 16 12 C -0.07 0.20 5.29 -19.87 -0.11 0.10 16 13 C -0.10 -0.02 8.37 22.29 0.19 0.16 16 14 C -0.10 -0.23 6.22 22.31 0.14 -0.09 16 15 Br -0.06 -0.24 33.70 -20.37 -0.69 -0.92 16 16 C -0.11 -0.02 9.79 22.29 0.22 0.19 16 17 C -0.11 0.35 10.05 22.26 0.22 0.58 16 18 C -0.10 0.44 9.71 22.27 0.22 0.66 16 19 C -0.14 0.38 7.27 31.21 0.23 0.61 16 20 C -0.12 0.18 10.35 22.57 0.23 0.42 16 21 C -0.21 0.23 9.37 22.01 0.21 0.44 16 22 C 0.01 0.01 6.14 41.34 0.25 0.26 16 23 C -0.06 0.12 2.99 71.23 0.21 0.33 16 24 O -0.55 1.27 10.11 -148.98 -1.51 -0.23 16 25 Si 0.81 -4.07 31.30 68.60 2.15 -1.92 16 26 H 0.06 0.31 8.14 -2.38 -0.02 0.30 16 27 H 0.09 0.58 6.12 -2.39 -0.01 0.57 16 28 H 0.12 -0.10 5.25 -2.39 -0.01 -0.12 16 29 H 0.42 -3.46 7.65 -92.70 -0.71 -4.17 16 30 H 0.10 -0.49 7.73 -2.38 -0.02 -0.50 16 31 H 0.09 -0.79 8.14 -2.38 -0.02 -0.81 16 32 H 0.13 -0.09 6.65 -2.91 -0.02 -0.11 16 33 H 0.14 -0.20 8.06 -2.91 -0.02 -0.22 16 34 H 0.15 -1.14 8.06 -2.91 -0.02 -1.16 16 35 H 0.15 -1.45 8.05 -2.91 -0.02 -1.47 16 36 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 37 H 0.09 -0.16 6.31 -2.39 -0.02 -0.17 16 38 H 0.18 -1.49 7.49 -2.91 -0.02 -1.52 16 39 H 0.16 -0.72 6.63 -2.91 -0.02 -0.74 16 40 H 0.11 -0.07 7.96 -2.39 -0.02 -0.09 16 41 H 0.40 -3.79 8.31 -74.06 -0.62 -4.41 16 42 H -0.27 0.41 6.76 99.48 0.67 1.08 16 43 H -0.30 -0.63 7.11 99.48 0.71 0.07 16 Total: 0.00 -19.51 371.85 0.32 -19.20 By element: Atomic # 1 Polarization: -14.29 SS G_CDS: -0.25 Total: -14.54 kcal Atomic # 6 Polarization: 5.71 SS G_CDS: 4.64 Total: 10.35 kcal Atomic # 7 Polarization: -0.20 SS G_CDS: -3.97 Total: -4.17 kcal Atomic # 8 Polarization: -6.43 SS G_CDS: -1.57 Total: -7.99 kcal Atomic # 14 Polarization: -4.07 SS G_CDS: 2.15 Total: -1.92 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -0.69 Total: -0.92 kcal Total: -19.51 0.32 -19.20 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.356 kcal (2) G-P(sol) polarization free energy of solvation -19.513 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.842 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.317 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.197 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.159 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds