Wall clock time and date at job start Sun Mar 7 2021 01:36:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86303 * 109.47149 * 2 1 4 4 C 1.50697 * 109.46829 * 240.00287 * 2 1 3 5 5 C 1.36453 * 120.29235 * 240.01754 * 4 2 1 6 6 C 1.40089 * 119.25537 * 179.73061 * 5 4 2 7 7 C 1.40855 * 132.86686 * 179.61350 * 6 5 4 8 8 C 1.46563 * 126.57671 * 0.67638 * 7 6 5 9 9 O 1.21719 * 120.00428 * 359.70765 * 8 7 6 10 10 N 1.34784 * 119.99850 * 179.71628 * 8 7 6 11 11 C 1.46496 * 119.99758 * 179.97438 * 10 8 7 12 12 H 1.09001 * 112.85032 * 336.19438 * 11 10 8 13 13 C 1.53782 * 113.68971 * 107.45966 * 11 10 8 14 14 C 1.53962 * 87.11063 * 89.19569 * 13 11 10 15 15 H 1.08993 * 113.61598 * 270.84305 * 14 13 11 16 16 C 1.50700 * 113.66521 * 139.88647 * 14 13 11 17 17 C 1.38219 * 119.99921 * 322.27819 * 16 14 13 18 18 C 1.38264 * 120.02153 * 179.76618 * 17 16 14 19 19 C 1.38199 * 120.00981 * 0.50914 * 18 17 16 20 20 C 1.38353 * 119.98858 * 359.74330 * 19 18 17 21 21 Br 1.89087 * 120.00762 * 180.02562 * 20 19 18 22 22 C 1.38239 * 119.99271 * 142.55424 * 16 14 13 23 23 C 1.53781 * 113.61266 * 204.99541 * 11 10 8 24 24 C 1.40555 * 106.84194 * 180.41403 * 7 6 5 25 25 N 1.30748 * 108.74271 * 0.24367 * 24 7 6 26 26 N 1.36583 * 120.22715 * 0.50388 * 6 5 4 27 27 C 1.36237 * 120.07973 * 359.47229 * 26 6 5 28 28 C 1.35184 * 120.70897 * 0.30133 * 27 26 6 29 29 H 0.96704 * 113.99569 * 300.00338 * 1 2 3 30 30 H 1.08999 * 109.47074 * 120.00030 * 2 1 3 31 31 H 1.48501 * 110.00111 * 300.00330 * 3 2 1 32 32 H 1.48503 * 109.99880 * 61.31945 * 3 2 1 33 33 H 1.08002 * 120.37287 * 359.96405 * 5 4 2 34 34 H 0.97001 * 119.99554 * 359.97438 * 10 8 7 35 35 H 1.08997 * 113.61668 * 203.67120 * 13 11 10 36 36 H 1.08998 * 113.61674 * 334.49629 * 13 11 10 37 37 H 1.08000 * 119.98611 * 0.02562 * 17 16 14 38 38 H 1.07996 * 119.99387 * 180.23195 * 18 17 16 39 39 H 1.07994 * 120.00422 * 179.76920 * 19 18 17 40 40 H 1.08004 * 120.00272 * 359.97438 * 22 16 14 41 41 H 1.09002 * 113.61445 * 25.35018 * 23 11 10 42 42 H 1.09002 * 113.61408 * 156.16749 * 23 11 10 43 43 H 1.07994 * 125.63127 * 180.25830 * 24 7 6 44 44 H 1.08001 * 119.64690 * 180.26919 * 27 26 6 45 45 H 1.08003 * 119.84297 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7158 -1.8205 -1.1123 6 6 3.1660 -2.4672 -2.2706 7 6 3.9741 -3.6012 -2.4824 8 6 4.5746 -4.4508 -1.4500 9 8 4.3958 -4.1971 -0.2731 10 7 5.3250 -5.5130 -1.8039 11 6 5.9257 -6.3619 -0.7721 12 1 6.0571 -5.8443 0.1782 13 6 5.2536 -7.7384 -0.6360 14 6 6.2462 -8.2415 -1.7000 15 1 5.8863 -8.1258 -2.7222 16 6 6.7851 -9.6207 -1.4203 17 6 7.0685 -10.0019 -0.1223 18 6 7.5584 -11.2689 0.1354 19 6 7.7750 -12.1512 -0.9060 20 6 7.4964 -11.7683 -2.2060 21 35 7.7919 -12.9753 -3.6313 22 6 7.0015 -10.5026 -2.4627 23 6 7.1832 -7.1101 -1.2451 24 6 4.0891 -3.7654 -3.8735 25 7 3.4163 -2.8136 -4.4659 26 7 2.8302 -1.9832 -3.5029 27 6 2.0461 -0.8743 -3.6106 28 6 1.5965 -0.2369 -2.5065 29 1 -0.3933 0.4418 0.7651 30 1 1.7924 -0.5138 0.8900 31 1 1.5615 2.4680 -1.2084 32 1 1.5880 2.4586 1.2243 33 1 2.9836 -2.1987 -0.1367 34 1 5.4673 -5.7153 -2.7419 35 1 5.3941 -8.1981 0.3423 36 1 4.2144 -7.7513 -0.9644 37 1 6.9032 -9.3112 0.6914 38 1 7.7761 -11.5675 1.1501 39 1 8.1612 -13.1395 -0.7051 40 1 6.7839 -10.2033 -3.4773 41 1 7.7021 -6.6161 -2.0665 42 1 7.8519 -7.3967 -0.4334 43 1 4.6418 -4.5485 -4.3711 44 1 1.7812 -0.5002 -4.5885 45 1 0.9761 0.6413 -2.6081 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:36:47 Heat of formation + Delta-G solvation = 99.118489 kcal Electronic energy + Delta-G solvation = -30854.204067 eV Core-core repulsion = 26466.283069 eV Total energy + Delta-G solvation = -4387.920998 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.052 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -43.26962 -41.53343 -40.15514 -39.26451 -38.62581 -37.42113 -34.57182 -34.20097 -33.14652 -32.17181 -32.08362 -30.34438 -29.98764 -27.43223 -26.77698 -26.30257 -24.93527 -23.84872 -23.52355 -23.01969 -22.37995 -21.26191 -20.06385 -19.25144 -18.63013 -18.12156 -17.91441 -17.49387 -17.02206 -16.88416 -16.75704 -16.40908 -16.22154 -15.88388 -15.65153 -15.58220 -15.23299 -15.06510 -14.58829 -14.50882 -14.48394 -14.26848 -14.13503 -14.07861 -13.55059 -13.41718 -13.28850 -13.03537 -12.92055 -12.73979 -12.37712 -12.12693 -12.00182 -11.98810 -11.91684 -11.58239 -11.53690 -11.36091 -11.14003 -10.86023 -10.76843 -10.28989 -10.01419 -9.87596 -9.61579 -8.74485 -5.08297 -0.55286 -0.09703 0.07738 0.24473 0.67324 1.02160 1.06028 1.11179 1.46651 1.77334 2.05255 2.21023 2.53112 2.58694 2.95389 3.13031 3.38355 3.43299 3.52897 3.54489 3.65482 3.70699 3.79381 3.85959 3.89080 3.99925 4.01495 4.04091 4.15747 4.22346 4.25093 4.33236 4.36725 4.54274 4.59579 4.61856 4.66522 4.73370 4.83574 4.87634 4.91406 4.97646 5.08677 5.11491 5.17507 5.18855 5.27828 5.31414 5.47492 5.65027 5.67231 5.77755 6.24935 6.33315 6.60654 7.39564 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.077 4.077 3 Si 0.692 3.308 4 C -0.025 4.025 5 C -0.093 4.093 6 C 0.170 3.830 7 C -0.317 4.317 8 C 0.606 3.394 9 O -0.547 6.547 10 N -0.713 5.713 11 C 0.125 3.875 12 H 0.107 0.893 13 C -0.144 4.144 14 C -0.075 4.075 15 H 0.100 0.900 16 C -0.064 4.064 17 C -0.102 4.102 18 C -0.110 4.110 19 C -0.096 4.096 20 C -0.088 4.088 21 Br -0.051 7.051 22 C -0.088 4.088 23 C -0.136 4.136 24 C 0.120 3.880 25 N -0.313 5.313 26 N -0.265 5.265 27 C 0.115 3.885 28 C -0.144 4.144 29 H 0.385 0.615 30 H 0.084 0.916 31 H -0.248 1.248 32 H -0.251 1.251 33 H 0.165 0.835 34 H 0.399 0.601 35 H 0.095 0.905 36 H 0.076 0.924 37 H 0.131 0.869 38 H 0.133 0.867 39 H 0.132 0.868 40 H 0.131 0.869 41 H 0.078 0.922 42 H 0.098 0.902 43 H 0.198 0.802 44 H 0.177 0.823 45 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.445 2.831 1.465 3.499 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.186 4.186 3 Si 0.590 3.410 4 C -0.030 4.030 5 C -0.112 4.112 6 C 0.049 3.951 7 C -0.332 4.332 8 C 0.395 3.605 9 O -0.426 6.426 10 N -0.363 5.363 11 C 0.019 3.981 12 H 0.125 0.875 13 C -0.183 4.183 14 C -0.093 4.093 15 H 0.118 0.882 16 C -0.065 4.065 17 C -0.120 4.120 18 C -0.129 4.129 19 C -0.116 4.116 20 C -0.167 4.167 21 Br 0.035 6.965 22 C -0.108 4.108 23 C -0.174 4.174 24 C -0.062 4.062 25 N -0.133 5.133 26 N -0.029 5.029 27 C -0.010 4.010 28 C -0.165 4.165 29 H 0.234 0.766 30 H 0.102 0.898 31 H -0.172 1.172 32 H -0.176 1.176 33 H 0.183 0.817 34 H 0.233 0.767 35 H 0.113 0.887 36 H 0.095 0.905 37 H 0.149 0.851 38 H 0.151 0.849 39 H 0.150 0.850 40 H 0.149 0.851 41 H 0.097 0.903 42 H 0.117 0.883 43 H 0.214 0.786 44 H 0.194 0.806 45 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 1.015 3.502 -0.031 3.647 hybrid contribution -0.860 -0.584 0.909 1.381 sum 0.155 2.919 0.878 3.052 Atomic orbital electron populations 1.86579 1.16969 1.80339 1.50118 1.24726 0.85037 1.11298 0.97498 0.94462 0.91711 0.73466 0.81342 1.19353 0.95349 0.94201 0.94134 1.20659 0.98528 0.93779 0.98247 1.19225 0.95645 0.94135 0.86095 1.19553 1.16167 1.03986 0.93497 1.16804 0.77216 0.79168 0.87306 1.90780 1.61232 1.72038 1.18547 1.45358 1.52794 1.28658 1.09511 1.21771 0.93088 0.90331 0.92862 0.87463 1.23617 0.99374 0.95883 0.99426 1.21654 0.97166 0.90259 1.00231 0.88229 1.19699 0.98623 0.95277 0.92882 1.21185 0.97919 0.96399 0.96511 1.21199 0.98905 0.93556 0.99208 1.21167 0.99100 1.00435 0.90878 1.21839 1.06321 0.95313 0.93240 1.96779 1.95514 1.59763 1.44454 1.21026 0.98299 0.91671 0.99791 1.23438 0.96232 0.95439 1.02245 1.24050 0.94372 0.95769 0.91965 1.77644 1.18534 1.06354 1.10790 1.46087 1.32086 1.18868 1.05809 1.21566 0.92306 0.85328 1.01850 1.20793 1.02764 1.02553 0.90423 0.76635 0.89755 1.17155 1.17555 0.81747 0.76700 0.88659 0.90529 0.85139 0.84944 0.85005 0.85078 0.90308 0.88308 0.78555 0.80553 0.82296 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.24 12.76 -35.23 -0.45 -0.21 16 2 C -0.08 0.11 2.81 36.00 0.10 0.21 16 3 Si 0.69 -1.64 31.97 -169.99 -5.43 -7.07 16 4 C -0.02 0.00 4.53 -104.55 -0.47 -0.48 16 5 C -0.09 -0.14 9.35 -39.53 -0.37 -0.51 16 6 C 0.17 0.47 6.76 -84.07 -0.57 -0.10 16 7 C -0.32 -0.68 6.17 -104.68 -0.65 -1.32 16 8 C 0.61 1.46 7.78 -12.90 -0.10 1.36 16 9 O -0.55 -2.99 15.30 5.17 0.08 -2.91 16 10 N -0.71 0.61 5.26 -54.36 -0.29 0.33 16 11 C 0.13 -0.14 4.32 -67.12 -0.29 -0.43 16 12 H 0.11 0.04 7.46 -51.93 -0.39 -0.34 16 13 C -0.14 0.22 7.27 -25.82 -0.19 0.03 16 14 C -0.07 0.17 3.87 -90.86 -0.35 -0.18 16 15 H 0.10 -0.30 8.10 -51.93 -0.42 -0.73 16 16 C -0.06 0.05 5.29 -104.63 -0.55 -0.50 16 17 C -0.10 0.11 8.60 -39.58 -0.34 -0.23 16 18 C -0.11 0.08 10.05 -39.59 -0.40 -0.32 16 19 C -0.10 -0.03 9.79 -39.55 -0.39 -0.42 16 20 C -0.09 -0.09 6.22 -39.51 -0.25 -0.34 16 21 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 22 C -0.09 -0.02 9.45 -39.56 -0.37 -0.39 16 23 C -0.14 0.36 7.28 -25.92 -0.19 0.17 16 24 C 0.12 0.06 11.44 -17.14 -0.20 -0.14 16 25 N -0.31 -0.83 12.57 30.75 0.39 -0.45 16 26 N -0.26 -0.61 3.86 -10.55 -0.04 -0.66 16 27 C 0.12 -0.01 11.17 -16.68 -0.19 -0.20 16 28 C -0.14 0.08 8.67 -39.95 -0.35 -0.27 16 29 H 0.39 -1.68 8.74 45.56 0.40 -1.28 16 30 H 0.08 -0.23 7.71 -51.93 -0.40 -0.63 16 31 H -0.25 0.02 7.07 56.52 0.40 0.42 16 32 H -0.25 0.11 7.11 56.52 0.40 0.51 16 33 H 0.17 0.24 7.01 -52.49 -0.37 -0.12 16 34 H 0.40 -1.37 7.63 -40.82 -0.31 -1.68 16 35 H 0.10 -0.19 6.32 -51.93 -0.33 -0.52 16 36 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.13 -0.35 6.67 -52.49 -0.35 -0.70 16 38 H 0.13 -0.34 8.06 -52.49 -0.42 -0.77 16 39 H 0.13 -0.09 8.06 -52.49 -0.42 -0.52 16 40 H 0.13 -0.11 8.06 -52.48 -0.42 -0.54 16 41 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 42 H 0.10 -0.28 7.71 -51.93 -0.40 -0.68 16 43 H 0.20 -0.75 7.46 -52.49 -0.39 -1.14 16 44 H 0.18 -0.50 8.06 -52.49 -0.42 -0.92 16 45 H 0.16 -0.33 7.52 -52.48 -0.39 -0.72 16 LS Contribution 401.26 15.07 6.05 6.05 Total: 0.00 -9.62 401.26 -13.18 -22.81 By element: Atomic # 1 Polarization: -6.37 SS G_CDS: -5.09 Total: -11.47 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -6.10 Total: -4.06 kcal Atomic # 7 Polarization: -0.84 SS G_CDS: 0.06 Total: -0.78 kcal Atomic # 8 Polarization: -2.75 SS G_CDS: -0.37 Total: -3.12 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: -5.43 Total: -7.07 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -9.62 -13.18 -22.81 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 121.924 kcal (2) G-P(sol) polarization free energy of solvation -9.624 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 112.300 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.182 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.806 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.118 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds