Wall clock time and date at job start Sun Mar 7 2021 01:36:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86303 * 109.47149 * 2 1 4 4 C 1.50697 * 109.46829 * 240.00287 * 2 1 3 5 5 C 1.36453 * 120.29235 * 240.01754 * 4 2 1 6 6 C 1.40089 * 119.25537 * 179.73061 * 5 4 2 7 7 C 1.40855 * 132.86686 * 179.61350 * 6 5 4 8 8 C 1.46563 * 126.57671 * 0.67638 * 7 6 5 9 9 O 1.21719 * 120.00428 * 359.70765 * 8 7 6 10 10 N 1.34784 * 119.99850 * 179.71628 * 8 7 6 11 11 C 1.46496 * 119.99758 * 179.97438 * 10 8 7 12 12 H 1.09001 * 112.85032 * 336.19438 * 11 10 8 13 13 C 1.53782 * 113.68971 * 107.45966 * 11 10 8 14 14 C 1.53962 * 87.11063 * 89.19569 * 13 11 10 15 15 H 1.08993 * 113.61598 * 270.84305 * 14 13 11 16 16 C 1.50700 * 113.66521 * 139.88647 * 14 13 11 17 17 C 1.38219 * 119.99921 * 322.27819 * 16 14 13 18 18 C 1.38264 * 120.02153 * 179.76618 * 17 16 14 19 19 C 1.38199 * 120.00981 * 0.50914 * 18 17 16 20 20 C 1.38353 * 119.98858 * 359.74330 * 19 18 17 21 21 Br 1.89087 * 120.00762 * 180.02562 * 20 19 18 22 22 C 1.38239 * 119.99271 * 142.55424 * 16 14 13 23 23 C 1.53781 * 113.61266 * 204.99541 * 11 10 8 24 24 C 1.40555 * 106.84194 * 180.41403 * 7 6 5 25 25 N 1.30748 * 108.74271 * 0.24367 * 24 7 6 26 26 N 1.36583 * 120.22715 * 0.50388 * 6 5 4 27 27 C 1.36237 * 120.07973 * 359.47229 * 26 6 5 28 28 C 1.35184 * 120.70897 * 0.30133 * 27 26 6 29 29 H 0.96704 * 113.99569 * 300.00338 * 1 2 3 30 30 H 1.08999 * 109.47074 * 120.00030 * 2 1 3 31 31 H 1.48501 * 110.00111 * 300.00330 * 3 2 1 32 32 H 1.48503 * 109.99880 * 61.31945 * 3 2 1 33 33 H 1.08002 * 120.37287 * 359.96405 * 5 4 2 34 34 H 0.97001 * 119.99554 * 359.97438 * 10 8 7 35 35 H 1.08997 * 113.61668 * 203.67120 * 13 11 10 36 36 H 1.08998 * 113.61674 * 334.49629 * 13 11 10 37 37 H 1.08000 * 119.98611 * 0.02562 * 17 16 14 38 38 H 1.07996 * 119.99387 * 180.23195 * 18 17 16 39 39 H 1.07994 * 120.00422 * 179.76920 * 19 18 17 40 40 H 1.08004 * 120.00272 * 359.97438 * 22 16 14 41 41 H 1.09002 * 113.61445 * 25.35018 * 23 11 10 42 42 H 1.09002 * 113.61408 * 156.16749 * 23 11 10 43 43 H 1.07994 * 125.63127 * 180.25830 * 24 7 6 44 44 H 1.08001 * 119.64690 * 180.26919 * 27 26 6 45 45 H 1.08003 * 119.84297 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7158 -1.8205 -1.1123 6 6 3.1660 -2.4672 -2.2706 7 6 3.9741 -3.6012 -2.4824 8 6 4.5746 -4.4508 -1.4500 9 8 4.3958 -4.1971 -0.2731 10 7 5.3250 -5.5130 -1.8039 11 6 5.9257 -6.3619 -0.7721 12 1 6.0571 -5.8443 0.1782 13 6 5.2536 -7.7384 -0.6360 14 6 6.2462 -8.2415 -1.7000 15 1 5.8863 -8.1258 -2.7222 16 6 6.7851 -9.6207 -1.4203 17 6 7.0685 -10.0019 -0.1223 18 6 7.5584 -11.2689 0.1354 19 6 7.7750 -12.1512 -0.9060 20 6 7.4964 -11.7683 -2.2060 21 35 7.7919 -12.9753 -3.6313 22 6 7.0015 -10.5026 -2.4627 23 6 7.1832 -7.1101 -1.2451 24 6 4.0891 -3.7654 -3.8735 25 7 3.4163 -2.8136 -4.4659 26 7 2.8302 -1.9832 -3.5029 27 6 2.0461 -0.8743 -3.6106 28 6 1.5965 -0.2369 -2.5065 29 1 -0.3933 0.4418 0.7651 30 1 1.7924 -0.5138 0.8900 31 1 1.5615 2.4680 -1.2084 32 1 1.5880 2.4586 1.2243 33 1 2.9836 -2.1987 -0.1367 34 1 5.4673 -5.7153 -2.7419 35 1 5.3941 -8.1981 0.3423 36 1 4.2144 -7.7513 -0.9644 37 1 6.9032 -9.3112 0.6914 38 1 7.7761 -11.5675 1.1501 39 1 8.1612 -13.1395 -0.7051 40 1 6.7839 -10.2033 -3.4773 41 1 7.7021 -6.6161 -2.0665 42 1 7.8519 -7.3967 -0.4334 43 1 4.6418 -4.5485 -4.3711 44 1 1.7812 -0.5002 -4.5885 45 1 0.9761 0.6413 -2.6081 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:36:45 Heat of formation + Delta-G solvation = 102.379892 kcal Electronic energy + Delta-G solvation = -30854.062642 eV Core-core repulsion = 26466.283069 eV Total energy + Delta-G solvation = -4387.779573 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.052 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -43.31149 -41.46762 -40.18766 -39.23168 -38.64029 -37.38034 -34.62742 -34.21260 -33.12683 -32.18591 -32.04994 -30.35166 -29.97387 -27.41358 -26.62836 -26.23922 -24.93596 -23.85822 -23.46691 -23.00910 -22.33543 -21.31862 -19.98472 -19.26190 -18.56319 -18.05602 -17.89294 -17.48465 -17.00213 -16.94792 -16.70508 -16.37620 -16.14793 -15.86136 -15.66669 -15.56253 -15.24996 -15.03198 -14.55873 -14.44817 -14.42686 -14.20376 -14.12228 -14.02195 -13.42157 -13.33981 -13.29132 -13.04103 -12.85217 -12.67890 -12.29608 -12.13594 -11.97589 -11.95986 -11.86148 -11.61242 -11.49487 -11.33146 -11.11072 -10.94651 -10.84453 -10.25096 -10.03319 -9.82332 -9.58110 -8.79460 -4.90138 -0.58350 -0.12760 0.12138 0.30755 0.65774 1.01210 1.03688 1.21698 1.60894 1.87020 2.05687 2.22284 2.48671 2.60466 3.01548 3.17238 3.50197 3.51628 3.63563 3.65502 3.71059 3.77306 3.87484 3.91330 3.97973 4.02684 4.14888 4.15151 4.20739 4.32598 4.34613 4.38533 4.44855 4.57669 4.69414 4.71945 4.77397 4.82826 4.94634 4.97700 5.03127 5.08475 5.11561 5.15754 5.21370 5.25343 5.28811 5.39760 5.54524 5.64552 5.71841 5.86849 6.29126 6.52913 6.63416 7.32904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.086 4.086 3 Si 0.764 3.236 4 C -0.020 4.020 5 C -0.111 4.111 6 C 0.151 3.849 7 C -0.337 4.337 8 C 0.603 3.397 9 O -0.587 6.587 10 N -0.698 5.698 11 C 0.120 3.880 12 H 0.090 0.910 13 C -0.142 4.142 14 C -0.067 4.067 15 H 0.111 0.889 16 C -0.065 4.065 17 C -0.105 4.105 18 C -0.114 4.114 19 C -0.109 4.109 20 C -0.103 4.103 21 Br -0.062 7.062 22 C -0.098 4.098 23 C -0.123 4.123 24 C 0.131 3.869 25 N -0.340 5.340 26 N -0.273 5.273 27 C 0.112 3.888 28 C -0.147 4.147 29 H 0.400 0.600 30 H 0.096 0.904 31 H -0.275 1.275 32 H -0.275 1.275 33 H 0.158 0.842 34 H 0.413 0.587 35 H 0.100 0.900 36 H 0.065 0.935 37 H 0.147 0.853 38 H 0.150 0.850 39 H 0.136 0.864 40 H 0.138 0.862 41 H 0.088 0.912 42 H 0.104 0.896 43 H 0.235 0.765 44 H 0.202 0.798 45 H 0.176 0.824 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.712 3.222 1.174 3.833 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.194 4.194 3 Si 0.664 3.336 4 C -0.026 4.026 5 C -0.130 4.130 6 C 0.030 3.970 7 C -0.351 4.351 8 C 0.393 3.607 9 O -0.469 6.469 10 N -0.349 5.349 11 C 0.015 3.985 12 H 0.108 0.892 13 C -0.181 4.181 14 C -0.085 4.085 15 H 0.129 0.871 16 C -0.066 4.066 17 C -0.123 4.123 18 C -0.132 4.132 19 C -0.129 4.129 20 C -0.182 4.182 21 Br 0.023 6.977 22 C -0.118 4.118 23 C -0.161 4.161 24 C -0.050 4.050 25 N -0.161 5.161 26 N -0.037 5.037 27 C -0.014 4.014 28 C -0.168 4.168 29 H 0.252 0.748 30 H 0.114 0.886 31 H -0.201 1.201 32 H -0.201 1.201 33 H 0.176 0.824 34 H 0.250 0.750 35 H 0.118 0.882 36 H 0.083 0.917 37 H 0.165 0.835 38 H 0.168 0.832 39 H 0.154 0.846 40 H 0.156 0.844 41 H 0.107 0.893 42 H 0.122 0.878 43 H 0.251 0.749 44 H 0.219 0.781 45 H 0.193 0.807 Dipole moment (debyes) X Y Z Total from point charges 1.297 3.858 -0.340 4.085 hybrid contribution -1.005 -0.663 1.048 1.596 sum 0.292 3.196 0.707 3.286 Atomic orbital electron populations 1.86528 1.17369 1.80937 1.51374 1.24942 0.84870 1.12312 0.97265 0.93522 0.90715 0.70979 0.78361 1.19599 0.94304 0.93493 0.95187 1.20647 0.99868 0.94708 0.97804 1.19544 0.96062 0.94714 0.86670 1.19672 1.16939 1.04315 0.94218 1.16939 0.77270 0.79673 0.86801 1.90751 1.62881 1.73220 1.20016 1.45233 1.51595 1.27604 1.10451 1.21796 0.94259 0.90186 0.92282 0.89219 1.23605 0.98850 0.95605 1.00025 1.21644 0.96794 0.89542 1.00542 0.87117 1.19854 0.98315 0.95655 0.92816 1.21449 0.97275 0.96610 0.96970 1.21461 0.98442 0.93518 0.99825 1.21341 0.99502 1.01037 0.90994 1.21959 1.07382 0.95623 0.93243 1.96753 1.95624 1.60262 1.45055 1.21185 0.98466 0.91591 1.00518 1.23382 0.95538 0.94580 1.02608 1.24623 0.93385 0.95709 0.91279 1.77580 1.19656 1.07257 1.11561 1.46283 1.32468 1.19394 1.05567 1.22101 0.91440 0.84599 1.03216 1.21037 1.02746 1.02955 0.90051 0.74826 0.88646 1.20086 1.20073 0.82444 0.75029 0.88174 0.91663 0.83517 0.83192 0.84588 0.84402 0.89346 0.87804 0.74872 0.78087 0.80695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.50 12.76 -148.98 -1.90 -1.40 16 2 C -0.09 0.23 2.81 71.24 0.20 0.43 16 3 Si 0.76 -3.70 31.97 68.60 2.19 -1.51 16 4 C -0.02 -0.02 4.53 -19.82 -0.09 -0.11 16 5 C -0.11 -0.51 9.35 22.30 0.21 -0.30 16 6 C 0.15 1.02 6.76 39.49 0.27 1.29 16 7 C -0.34 -1.72 6.17 -19.90 -0.12 -1.85 16 8 C 0.60 3.53 7.78 86.41 0.67 4.20 16 9 O -0.59 -7.57 15.30 -4.41 -0.07 -7.64 16 10 N -0.70 1.21 5.26 -444.08 -2.34 -1.13 16 11 C 0.12 -0.28 4.32 45.52 0.20 -0.08 16 12 H 0.09 0.16 7.46 -2.39 -0.02 0.14 16 13 C -0.14 0.47 7.27 31.18 0.23 0.70 16 14 C -0.07 0.37 3.87 -10.95 -0.04 0.33 16 15 H 0.11 -0.84 8.10 -2.39 -0.02 -0.86 16 16 C -0.07 0.15 5.29 -19.87 -0.11 0.05 16 17 C -0.10 0.31 8.60 22.27 0.19 0.50 16 18 C -0.11 0.23 10.05 22.27 0.22 0.46 16 19 C -0.11 -0.08 9.79 22.29 0.22 0.14 16 20 C -0.10 -0.23 6.22 22.31 0.14 -0.09 16 21 Br -0.06 -0.21 33.70 -20.37 -0.69 -0.89 16 22 C -0.10 -0.01 9.45 22.29 0.21 0.20 16 23 C -0.12 0.79 7.28 31.12 0.23 1.01 16 24 C 0.13 0.10 11.44 85.42 0.98 1.08 16 25 N -0.34 -1.83 12.57 -56.62 -0.71 -2.54 16 26 N -0.27 -1.41 3.86 -187.28 -0.72 -2.14 16 27 C 0.11 -0.02 11.17 83.30 0.93 0.91 16 28 C -0.15 0.15 8.67 22.03 0.19 0.34 16 29 H 0.40 -3.53 8.74 -74.05 -0.65 -4.18 16 30 H 0.10 -0.48 7.71 -2.39 -0.02 -0.50 16 31 H -0.28 0.07 7.07 99.48 0.70 0.77 16 32 H -0.28 0.24 7.11 99.48 0.71 0.95 16 33 H 0.16 0.84 7.01 -2.91 -0.02 0.82 16 34 H 0.41 -3.24 7.63 -92.71 -0.71 -3.95 16 35 H 0.10 -0.43 6.32 -2.39 -0.02 -0.45 16 36 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 37 H 0.15 -0.98 6.67 -2.91 -0.02 -1.00 16 38 H 0.15 -0.93 8.06 -2.91 -0.02 -0.96 16 39 H 0.14 -0.14 8.06 -2.91 -0.02 -0.17 16 40 H 0.14 -0.28 8.06 -2.91 -0.02 -0.31 16 41 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 42 H 0.10 -0.72 7.71 -2.39 -0.02 -0.74 16 43 H 0.24 -2.13 7.46 -2.91 -0.02 -2.16 16 44 H 0.20 -1.27 8.06 -2.91 -0.02 -1.30 16 45 H 0.18 -0.81 7.52 -2.91 -0.02 -0.83 16 Total: 0.00 -23.73 401.26 0.24 -23.49 By element: Atomic # 1 Polarization: -15.22 SS G_CDS: -0.25 Total: -15.47 kcal Atomic # 6 Polarization: 4.50 SS G_CDS: 4.72 Total: 9.22 kcal Atomic # 7 Polarization: -2.03 SS G_CDS: -3.77 Total: -5.80 kcal Atomic # 8 Polarization: -7.07 SS G_CDS: -1.97 Total: -9.04 kcal Atomic # 14 Polarization: -3.70 SS G_CDS: 2.19 Total: -1.51 kcal Atomic # 35 Polarization: -0.21 SS G_CDS: -0.69 Total: -0.89 kcal Total: -23.73 0.24 -23.49 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 125.872 kcal (2) G-P(sol) polarization free energy of solvation -23.731 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.141 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.239 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.492 kcal (6) G-S(sol) free energy of system = (1) + (5) 102.380 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds