Wall clock time and date at job start Sun Mar 7 2021 01:37:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86296 * 109.47159 * 2 1 4 4 C 1.50703 * 109.47104 * 120.00192 * 2 1 3 5 5 C 1.37849 * 119.89325 * 64.99814 * 4 2 1 6 6 C 1.39661 * 119.87874 * 180.02562 * 5 4 2 7 7 C 1.47698 * 120.16523 * 180.02562 * 6 5 4 8 8 O 1.21573 * 119.99926 * 180.02562 * 7 6 5 9 9 N 1.34777 * 120.00076 * 359.72572 * 7 6 5 10 10 C 1.46504 * 119.99854 * 180.27913 * 9 7 6 11 11 H 1.08995 * 112.84849 * 25.32788 * 10 9 7 12 12 C 1.53784 * 113.61339 * 156.52596 * 10 9 7 13 13 C 1.53783 * 87.07951 * 89.11076 * 12 10 9 14 14 H 1.08993 * 113.61831 * 270.88309 * 13 12 10 15 15 C 1.50700 * 113.61275 * 140.06118 * 13 12 10 16 16 C 1.38224 * 119.99678 * 299.73059 * 15 13 12 17 17 C 1.38266 * 120.01754 * 179.76713 * 16 15 13 18 18 C 1.38189 * 120.01160 * 0.50231 * 17 16 15 19 19 C 1.38347 * 119.99114 * 359.74912 * 18 17 16 20 20 Br 1.89102 * 120.01130 * 179.97438 * 19 18 17 21 21 C 1.38245 * 119.99554 * 119.99828 * 15 13 12 22 22 C 1.53782 * 113.60882 * 254.13227 * 10 9 7 23 23 C 1.39826 * 119.66774 * 0.27308 * 6 5 4 24 24 F 1.35092 * 120.11054 * 179.70330 * 23 6 5 25 25 C 1.38320 * 119.77494 * 359.49385 * 23 6 5 26 26 C 1.38198 * 120.11771 * 0.48799 * 25 23 6 27 27 H 0.96698 * 114.00406 * 299.99744 * 1 2 3 28 28 H 1.09003 * 109.47481 * 239.99799 * 2 1 3 29 29 H 1.48498 * 109.99955 * 178.68395 * 3 2 1 30 30 H 1.48503 * 109.99878 * 299.99804 * 3 2 1 31 31 H 1.08000 * 120.06222 * 359.97438 * 5 4 2 32 32 H 0.97000 * 119.99736 * 0.27188 * 9 7 6 33 33 H 1.08997 * 113.61251 * 203.66437 * 12 10 9 34 34 H 1.09000 * 113.61257 * 334.48649 * 12 10 9 35 35 H 1.07993 * 119.98572 * 359.97438 * 16 15 13 36 36 H 1.08001 * 119.98904 * 180.23134 * 17 16 15 37 37 H 1.08006 * 120.00646 * 179.72862 * 18 17 16 38 38 H 1.08002 * 120.00120 * 0.02562 * 21 15 13 39 39 H 1.08989 * 113.61694 * 25.43599 * 22 10 9 40 40 H 1.09002 * 113.61061 * 156.33834 * 22 10 9 41 41 H 1.07995 * 119.93871 * 180.22472 * 25 23 6 42 42 H 1.08008 * 119.82753 * 179.74068 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6841 -2.0565 1.3956 6 6 2.1493 -2.7145 2.5363 7 6 1.8885 -4.1567 2.7194 8 8 2.2945 -4.7263 3.7138 9 7 1.1953 -4.8399 1.7872 10 6 0.9314 -6.2691 1.9718 11 1 0.9334 -6.5679 3.0200 12 6 -0.2915 -6.7758 1.1891 13 6 0.6689 -7.0497 0.0197 14 1 0.7935 -6.1999 -0.6512 15 6 0.3786 -8.3350 -0.7115 16 6 0.4286 -9.5404 -0.0369 17 6 0.1576 -10.7195 -0.7062 18 6 -0.1532 -10.6943 -2.0525 19 6 -0.1982 -9.4886 -2.7294 20 35 -0.6227 -9.4535 -4.5718 21 6 0.0678 -8.3089 -2.0583 22 6 1.7878 -7.1749 1.0713 23 6 2.8587 -2.0000 3.5065 24 9 3.3076 -2.6262 4.6162 25 6 3.1030 -0.6508 3.3242 26 6 2.6388 -0.0088 2.1918 27 1 -0.3934 0.4416 0.7650 28 1 1.7924 -0.5139 -0.8900 29 1 3.5345 1.7702 0.0320 30 1 1.5614 2.4678 -1.2085 31 1 1.1309 -2.6011 0.6447 32 1 0.8710 -4.3853 0.9940 33 1 -0.7360 -7.6779 1.6096 34 1 -1.0275 -5.9998 0.9787 35 1 0.6760 -9.5608 1.0141 36 1 0.1930 -11.6607 -0.1778 37 1 -0.3606 -11.6158 -2.5763 38 1 0.0334 -7.3675 -2.5865 39 1 2.7299 -6.7207 0.7647 40 1 1.9108 -8.1859 1.4597 41 1 3.6537 -0.0971 4.0702 42 1 2.8286 1.0458 2.0563 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:37:01 Heat of formation + Delta-G solvation = -23.735239 kcal Electronic energy + Delta-G solvation = -28613.232325 eV Core-core repulsion = 24293.371736 eV Total energy + Delta-G solvation = -4319.860589 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.037 amu Computer time = 2.14 seconds Orbital eigenvalues (eV) -49.89256 -41.82775 -40.95920 -39.99033 -38.81849 -37.60491 -34.86813 -33.30534 -32.80016 -32.42817 -31.81489 -30.13927 -26.87997 -26.80600 -26.65936 -25.35445 -23.68816 -23.42376 -22.44020 -21.70503 -20.22246 -19.28124 -18.50787 -18.38443 -18.04013 -17.42557 -17.02237 -16.86693 -16.52660 -16.34941 -16.24384 -15.95793 -15.79392 -15.74381 -15.19104 -15.11648 -14.73348 -14.60653 -14.49553 -14.37978 -14.28622 -13.81952 -13.65822 -13.54144 -13.24412 -13.01337 -12.90307 -12.43232 -12.31015 -12.08367 -12.04810 -12.00302 -11.61982 -11.43155 -11.19372 -11.09941 -10.62995 -10.47000 -10.17395 -9.92194 -9.89431 -9.66066 -5.20131 -0.56381 -0.15169 0.03550 0.20150 0.63741 1.09215 1.47398 1.60417 1.82926 1.88203 2.42252 2.49450 2.97147 3.18525 3.27183 3.32303 3.38954 3.46409 3.48322 3.56408 3.72781 3.80825 3.82533 3.93082 3.96332 3.99219 4.17525 4.23318 4.31764 4.39128 4.50043 4.54853 4.58446 4.61243 4.65640 4.75756 4.80179 4.80840 4.85096 4.87605 4.96695 4.99754 5.14417 5.26734 5.37122 5.48223 5.50917 5.73428 6.30558 6.36669 7.07202 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.067 4.067 3 Si 0.686 3.314 4 C -0.140 4.140 5 C -0.031 4.031 6 C -0.175 4.175 7 C 0.562 3.438 8 O -0.517 6.517 9 N -0.708 5.708 10 C 0.121 3.879 11 H 0.108 0.892 12 C -0.134 4.134 13 C -0.074 4.074 14 H 0.099 0.901 15 C -0.065 4.065 16 C -0.102 4.102 17 C -0.109 4.109 18 C -0.095 4.095 19 C -0.088 4.088 20 Br -0.050 7.050 21 C -0.088 4.088 22 C -0.143 4.143 23 C 0.168 3.832 24 F -0.110 7.110 25 C -0.156 4.156 26 C -0.058 4.058 27 H 0.381 0.619 28 H 0.118 0.882 29 H -0.255 1.255 30 H -0.251 1.251 31 H 0.138 0.862 32 H 0.401 0.599 33 H 0.101 0.899 34 H 0.079 0.921 35 H 0.131 0.869 36 H 0.133 0.867 37 H 0.133 0.867 38 H 0.131 0.869 39 H 0.076 0.924 40 H 0.098 0.902 41 H 0.151 0.849 42 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.694 3.519 0.067 3.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.177 4.177 3 Si 0.587 3.413 4 C -0.141 4.141 5 C -0.050 4.050 6 C -0.179 4.179 7 C 0.349 3.651 8 O -0.393 6.393 9 N -0.361 5.361 10 C 0.015 3.985 11 H 0.126 0.874 12 C -0.172 4.172 13 C -0.093 4.093 14 H 0.117 0.883 15 C -0.066 4.066 16 C -0.120 4.120 17 C -0.128 4.128 18 C -0.115 4.115 19 C -0.167 4.167 20 Br 0.036 6.964 21 C -0.108 4.108 22 C -0.182 4.182 23 C 0.147 3.853 24 F -0.088 7.088 25 C -0.175 4.175 26 C -0.076 4.076 27 H 0.229 0.771 28 H 0.135 0.865 29 H -0.179 1.179 30 H -0.176 1.176 31 H 0.156 0.844 32 H 0.237 0.763 33 H 0.119 0.881 34 H 0.098 0.902 35 H 0.149 0.851 36 H 0.151 0.849 37 H 0.151 0.849 38 H 0.149 0.851 39 H 0.095 0.905 40 H 0.116 0.884 41 H 0.168 0.832 42 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.973 3.366 -0.841 3.604 hybrid contribution 0.137 -0.579 -0.113 0.606 sum -0.836 2.787 -0.954 3.062 Atomic orbital electron populations 1.86522 1.16751 1.81666 1.49411 1.25044 0.85490 1.10270 0.96931 0.94799 0.81169 0.77545 0.87777 1.20333 1.01244 0.94598 0.97934 1.21017 0.95180 0.93820 0.94948 1.20051 1.05963 0.94489 0.97424 1.17963 0.78258 0.85854 0.83015 1.90878 1.50131 1.69881 1.28401 1.45539 1.56809 1.09694 1.24010 1.21866 0.95900 0.79742 1.00968 0.87376 1.23428 0.96181 1.02387 0.95210 1.21670 0.97372 0.95016 0.95216 0.88272 1.19675 0.99009 0.94874 0.93035 1.21185 0.98582 0.91801 1.00436 1.21203 0.98949 0.98768 0.93904 1.21174 0.98812 0.96723 0.94780 1.21842 1.06948 0.96404 0.91511 1.96784 1.92878 1.99267 1.07495 1.21022 0.98647 0.97075 0.94020 1.23629 0.97801 1.00954 0.95806 1.17748 0.93954 0.90455 0.83130 1.91632 1.85917 1.82330 1.48937 1.21179 1.03543 0.92633 1.00146 1.21085 0.94609 0.99731 0.92168 0.77121 0.86505 1.17943 1.17605 0.84420 0.76328 0.88067 0.90203 0.85144 0.84889 0.84945 0.85088 0.90499 0.88408 0.83171 0.84056 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.29 12.83 -35.23 -0.45 0.84 16 2 C -0.07 0.19 2.80 36.01 0.10 0.29 16 3 Si 0.69 -2.18 29.79 -169.99 -5.06 -7.25 16 4 C -0.14 0.34 5.35 -104.68 -0.56 -0.22 16 5 C -0.03 0.05 9.17 -39.19 -0.36 -0.31 16 6 C -0.18 -0.14 5.88 -104.91 -0.62 -0.76 16 7 C 0.56 1.35 7.77 -12.40 -0.10 1.25 16 8 O -0.52 -3.36 14.96 5.30 0.08 -3.29 16 9 N -0.71 0.59 5.21 -54.00 -0.28 0.31 16 10 C 0.12 -0.12 4.30 -67.11 -0.29 -0.41 16 11 H 0.11 0.07 7.50 -51.93 -0.39 -0.32 16 12 C -0.13 0.35 7.29 -25.92 -0.19 0.16 16 13 C -0.07 0.17 3.87 -90.81 -0.35 -0.19 16 14 H 0.10 -0.29 8.09 -51.93 -0.42 -0.71 16 15 C -0.06 0.05 5.29 -104.62 -0.55 -0.50 16 16 C -0.10 0.11 8.63 -39.58 -0.34 -0.24 16 17 C -0.11 0.08 10.05 -39.59 -0.40 -0.32 16 18 C -0.10 -0.03 9.79 -39.56 -0.39 -0.41 16 19 C -0.09 -0.09 6.22 -39.52 -0.25 -0.34 16 20 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 21 C -0.09 -0.02 9.45 -39.56 -0.37 -0.39 16 22 C -0.14 0.21 7.27 -25.77 -0.19 0.03 16 23 C 0.17 0.26 7.29 -38.96 -0.28 -0.03 16 24 F -0.11 -0.48 15.55 2.25 0.04 -0.45 16 25 C -0.16 0.22 10.01 -39.57 -0.40 -0.18 16 26 C -0.06 0.17 8.66 -39.51 -0.34 -0.18 16 27 H 0.38 -2.30 8.70 45.56 0.40 -1.91 16 28 H 0.12 -0.32 7.96 -51.93 -0.41 -0.73 16 29 H -0.25 0.20 7.11 56.52 0.40 0.60 16 30 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 31 H 0.14 -0.50 6.41 -52.49 -0.34 -0.84 16 32 H 0.40 -1.32 6.74 -40.82 -0.27 -1.60 16 33 H 0.10 -0.29 7.73 -51.93 -0.40 -0.69 16 34 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 35 H 0.13 -0.35 6.65 -52.49 -0.35 -0.70 16 36 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 37 H 0.13 -0.10 8.06 -52.48 -0.42 -0.52 16 38 H 0.13 -0.11 8.05 -52.49 -0.42 -0.53 16 39 H 0.08 -0.04 8.14 -51.94 -0.42 -0.46 16 40 H 0.10 -0.19 6.31 -51.93 -0.33 -0.52 16 41 H 0.15 -0.49 8.06 -52.49 -0.42 -0.92 16 42 H 0.14 -0.74 4.89 -52.48 -0.26 -1.00 16 LS Contribution 374.81 15.07 5.65 5.65 Total: 0.00 -8.56 374.81 -12.70 -21.26 By element: Atomic # 1 Polarization: -7.47 SS G_CDS: -4.51 Total: -11.98 kcal Atomic # 6 Polarization: 3.13 SS G_CDS: -5.87 Total: -2.73 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -0.28 Total: 0.31 kcal Atomic # 8 Polarization: -2.07 SS G_CDS: -0.37 Total: -2.44 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -2.18 SS G_CDS: -5.06 Total: -7.25 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -8.56 -12.70 -21.26 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.477 kcal (2) G-P(sol) polarization free energy of solvation -8.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.702 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.735 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.14 seconds