Wall clock time and date at job start Sun Mar 7 2021 01:37:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.46993 * 2 1 4 4 C 1.50700 * 109.46785 * 240.00182 * 2 1 3 5 5 C 1.38233 * 119.99995 * 299.99791 * 4 2 1 6 6 C 1.38237 * 119.99865 * 179.97438 * 5 4 2 7 7 C 1.38239 * 120.00174 * 0.02562 * 6 5 4 8 8 C 1.50697 * 119.99893 * 179.97438 * 7 6 5 9 9 C 1.50711 * 109.46782 * 89.99978 * 8 7 6 10 10 O 1.21270 * 120.00254 * 359.97438 * 9 8 7 11 11 N 1.34780 * 119.99583 * 180.02562 * 9 8 7 12 12 C 1.46497 * 119.99653 * 179.97438 * 11 9 8 13 13 H 1.09002 * 112.84935 * 334.66222 * 12 11 9 14 14 C 1.53786 * 113.61643 * 105.85894 * 12 11 9 15 15 C 1.53962 * 87.01719 * 89.22773 * 14 12 11 16 16 H 1.09002 * 113.61454 * 270.79954 * 15 14 12 17 17 C 1.50699 * 113.66451 * 139.93336 * 15 14 12 18 18 C 1.38219 * 119.99258 * 142.43622 * 17 15 14 19 19 C 1.38267 * 120.01760 * 179.97438 * 18 17 15 20 20 C 1.38189 * 120.01027 * 0.02562 * 19 18 17 21 21 C 1.38345 * 119.98999 * 0.02562 * 20 19 18 22 22 Br 1.89109 * 120.00895 * 180.02562 * 21 20 19 23 23 C 1.38241 * 119.99604 * 322.16641 * 17 15 14 24 24 C 1.53781 * 113.61305 * 203.46742 * 12 11 9 25 25 C 1.38232 * 119.99519 * 0.24742 * 7 6 5 26 26 C 1.38234 * 120.00377 * 359.47101 * 25 7 6 27 27 H 0.96692 * 114.00319 * 59.99537 * 1 2 3 28 28 H 1.08998 * 109.47589 * 120.00250 * 2 1 3 29 29 H 1.48499 * 109.99871 * 60.00377 * 3 2 1 30 30 H 1.48504 * 109.99482 * 181.32194 * 3 2 1 31 31 H 1.08000 * 120.00315 * 359.97438 * 5 4 2 32 32 H 1.08005 * 120.00024 * 179.97438 * 6 5 4 33 33 H 1.08992 * 109.47548 * 330.00002 * 8 7 6 34 34 H 1.08997 * 109.46989 * 209.99522 * 8 7 6 35 35 H 0.96995 * 120.00200 * 359.97438 * 11 9 8 36 36 H 1.08993 * 113.61491 * 203.74894 * 14 12 11 37 37 H 1.09000 * 113.61138 * 334.65232 * 14 12 11 38 38 H 1.07997 * 119.99050 * 359.97438 * 18 17 15 39 39 H 1.08003 * 119.98881 * 180.02562 * 19 18 17 40 40 H 1.08000 * 120.00311 * 179.97438 * 20 19 18 41 41 H 1.08000 * 120.00462 * 0.02562 * 23 17 15 42 42 H 1.09001 * 113.61695 * 25.34675 * 24 12 11 43 43 H 1.08997 * 113.61223 * 156.25258 * 24 12 11 44 44 H 1.08004 * 119.99338 * 179.72642 * 25 7 6 45 45 H 1.07997 * 120.00257 * 180.27250 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 1.5973 -2.0338 -1.4493 6 6 2.0576 -2.6853 -2.5783 7 6 2.8523 -2.0134 -3.4883 8 6 3.3545 -2.7238 -4.7188 9 6 2.3616 -2.5504 -5.8393 10 8 1.3461 -1.9132 -5.6565 11 7 2.6019 -3.1044 -7.0442 12 6 1.6366 -2.9363 -8.1332 13 1 0.6228 -2.7549 -7.7760 14 6 2.0951 -1.9445 -9.2154 15 6 2.7578 -3.1428 -9.9191 16 1 3.7838 -3.3245 -9.5988 17 6 2.6077 -3.1225 -11.4184 18 6 3.6483 -3.5477 -12.2228 19 6 3.5109 -3.5298 -13.5985 20 6 2.3334 -3.0862 -14.1698 21 6 1.2921 -2.6596 -13.3651 22 35 -0.3197 -2.0532 -14.1464 23 6 1.4274 -2.6839 -11.9890 24 6 1.7239 -4.0323 -9.2085 25 6 3.1908 -0.6917 -3.2666 26 6 2.7258 -0.0385 -2.1406 27 1 -0.3933 0.4417 -0.7649 28 1 1.7924 -0.5138 0.8899 29 1 1.5615 2.4679 1.2085 30 1 3.5346 1.7702 -0.0322 31 1 0.9768 -2.5589 -0.7381 32 1 1.7970 -3.7194 -2.7490 33 1 3.4756 -3.7850 -4.5017 34 1 4.3146 -2.3017 -5.0155 35 1 3.4139 -3.6144 -7.1903 36 1 1.2737 -1.5054 -9.7814 37 1 2.8060 -1.2016 -8.8537 38 1 4.5688 -3.8940 -11.7766 39 1 4.3241 -3.8625 -14.2266 40 1 2.2265 -3.0719 -15.2444 41 1 0.6130 -2.3554 -11.3603 42 1 2.1356 -4.9724 -8.8413 43 1 0.8009 -4.1649 -9.7727 44 1 3.8153 -0.1681 -3.9754 45 1 2.9867 0.9955 -1.9696 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:37:06 Heat of formation + Delta-G solvation = 11.473873 kcal Electronic energy + Delta-G solvation = -27468.286483 eV Core-core repulsion = 23463.869032 eV Total energy + Delta-G solvation = -4004.417451 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.062 amu Computer time = 2.32 seconds Orbital eigenvalues (eV) -41.74195 -40.88143 -40.07166 -38.85945 -37.54848 -34.67020 -34.00090 -33.34048 -31.94076 -31.87717 -30.28473 -29.71798 -26.87510 -26.56441 -25.54052 -23.78516 -23.66297 -22.69279 -22.27793 -21.38683 -20.25282 -18.50093 -18.36449 -17.87374 -17.34244 -16.98701 -16.69512 -16.41771 -16.30034 -16.18508 -15.93334 -15.56287 -15.22402 -15.17171 -14.72121 -14.66676 -14.55804 -14.46929 -14.35846 -13.95982 -13.67401 -13.58915 -13.29791 -13.12723 -12.96256 -12.79118 -12.48990 -12.19961 -12.06958 -12.01206 -11.90677 -11.64722 -11.61793 -11.38156 -11.22454 -10.92291 -10.38917 -10.13974 -9.90759 -9.83341 -9.67852 -9.57912 -4.99003 0.03448 0.18218 0.26863 0.49821 0.63507 1.33849 1.60813 1.65577 1.99284 2.03419 2.48432 2.80210 3.29157 3.47281 3.49394 3.54241 3.58114 3.69971 3.76821 3.80907 3.85330 3.92708 3.93183 4.04027 4.04688 4.16355 4.23452 4.30509 4.35887 4.46260 4.48683 4.55192 4.56549 4.59178 4.71193 4.72755 4.81783 4.83889 4.88122 4.98205 5.03040 5.09993 5.13721 5.25391 5.39816 5.41272 5.52135 5.57860 5.60656 5.72529 6.02912 6.40825 6.62675 7.19556 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.068 4.068 3 Si 0.688 3.312 4 C -0.119 4.119 5 C -0.091 4.091 6 C -0.103 4.103 7 C -0.064 4.064 8 C -0.103 4.103 9 C 0.517 3.483 10 O -0.523 6.523 11 N -0.717 5.717 12 C 0.121 3.879 13 H 0.105 0.895 14 C -0.144 4.144 15 C -0.073 4.073 16 H 0.101 0.899 17 C -0.066 4.066 18 C -0.101 4.101 19 C -0.110 4.110 20 C -0.095 4.095 21 C -0.087 4.087 22 Br -0.049 7.049 23 C -0.089 4.089 24 C -0.136 4.136 25 C -0.100 4.100 26 C -0.116 4.116 27 H 0.380 0.620 28 H 0.113 0.887 29 H -0.255 1.255 30 H -0.258 1.258 31 H 0.126 0.874 32 H 0.122 0.878 33 H 0.105 0.895 34 H 0.105 0.895 35 H 0.401 0.599 36 H 0.095 0.905 37 H 0.076 0.924 38 H 0.128 0.872 39 H 0.133 0.867 40 H 0.133 0.867 41 H 0.133 0.867 42 H 0.078 0.922 43 H 0.098 0.902 44 H 0.124 0.876 45 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.728 -2.212 -2.976 6.008 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.590 3.410 4 C -0.119 4.119 5 C -0.109 4.109 6 C -0.121 4.121 7 C -0.065 4.065 8 C -0.143 4.143 9 C 0.303 3.697 10 O -0.397 6.397 11 N -0.369 5.369 12 C 0.015 3.985 13 H 0.123 0.877 14 C -0.183 4.183 15 C -0.092 4.092 16 H 0.119 0.881 17 C -0.067 4.067 18 C -0.119 4.119 19 C -0.129 4.129 20 C -0.115 4.115 21 C -0.166 4.166 22 Br 0.037 6.963 23 C -0.108 4.108 24 C -0.174 4.174 25 C -0.118 4.118 26 C -0.133 4.133 27 H 0.227 0.773 28 H 0.130 0.870 29 H -0.180 1.180 30 H -0.183 1.183 31 H 0.144 0.856 32 H 0.140 0.860 33 H 0.123 0.877 34 H 0.123 0.877 35 H 0.236 0.764 36 H 0.113 0.887 37 H 0.095 0.905 38 H 0.146 0.854 39 H 0.150 0.850 40 H 0.150 0.850 41 H 0.151 0.849 42 H 0.097 0.903 43 H 0.117 0.883 44 H 0.142 0.858 45 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 3.935 -1.222 -2.138 4.642 hybrid contribution 0.949 -1.077 -0.009 1.435 sum 4.884 -2.299 -2.147 5.809 Atomic orbital electron populations 1.86486 1.17076 1.81747 1.49311 1.25047 0.85298 1.10064 0.97509 0.94614 0.80886 0.78365 0.87098 1.20331 0.99211 0.95317 0.97035 1.20954 0.98712 0.93850 0.97368 1.21017 0.97019 0.99999 0.94114 1.19254 0.98235 0.94274 0.94694 1.20691 0.98857 1.02986 0.91782 1.20580 0.87395 0.78736 0.82965 1.90760 1.27581 1.39250 1.82145 1.45702 1.24402 1.55803 1.10982 1.21823 0.94289 0.96289 0.86093 0.87679 1.23603 1.01209 0.96555 0.96900 1.21650 0.99840 0.97813 0.89850 0.88115 1.19689 0.93369 0.98452 0.95154 1.21220 0.98653 0.98502 0.93572 1.21207 0.97343 0.99241 0.95135 1.21172 0.92386 0.97819 1.00148 1.21832 0.93801 1.05746 0.95264 1.96793 1.28795 1.87940 1.82794 1.20972 0.98103 0.99047 0.92704 1.23428 1.00032 0.97534 0.96366 1.20902 0.99908 0.93821 0.97129 1.20941 0.98447 0.99214 0.94699 0.77266 0.86986 1.18012 1.18335 0.85617 0.86006 0.87692 0.87678 0.76438 0.88683 0.90531 0.85376 0.84960 0.84955 0.84880 0.90303 0.88324 0.85812 0.85663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.78 12.77 -35.23 -0.45 -1.23 16 2 C -0.07 -0.05 2.82 36.01 0.10 0.05 16 3 Si 0.69 -0.12 29.79 -169.99 -5.06 -5.18 16 4 C -0.12 -0.16 5.39 -104.62 -0.56 -0.72 16 5 C -0.09 -0.15 9.61 -39.58 -0.38 -0.53 16 6 C -0.10 -0.12 9.70 -39.58 -0.38 -0.50 16 7 C -0.06 -0.04 4.37 -104.62 -0.46 -0.49 16 8 C -0.10 0.23 5.83 -29.03 -0.17 0.06 16 9 C 0.52 0.05 7.82 -10.98 -0.09 -0.04 16 10 O -0.52 -2.44 15.65 5.57 0.09 -2.35 16 11 N -0.72 1.76 5.27 -53.01 -0.28 1.48 16 12 C 0.12 -0.20 4.29 -67.12 -0.29 -0.49 16 13 H 0.11 0.04 7.50 -51.93 -0.39 -0.35 16 14 C -0.14 0.27 7.27 -25.82 -0.19 0.09 16 15 C -0.07 0.21 3.87 -90.86 -0.35 -0.14 16 16 H 0.10 -0.41 8.09 -51.93 -0.42 -0.84 16 17 C -0.07 0.08 5.29 -104.63 -0.55 -0.47 16 18 C -0.10 0.15 9.71 -39.58 -0.38 -0.24 16 19 C -0.11 0.12 10.05 -39.59 -0.40 -0.28 16 20 C -0.10 0.00 9.79 -39.56 -0.39 -0.38 16 21 C -0.09 -0.06 6.22 -39.52 -0.25 -0.31 16 22 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.35 16 23 C -0.09 0.02 8.34 -39.56 -0.33 -0.31 16 24 C -0.14 0.40 7.29 -25.92 -0.19 0.22 16 25 C -0.10 -0.06 9.70 -39.58 -0.38 -0.45 16 26 C -0.12 -0.09 8.67 -39.58 -0.34 -0.43 16 27 H 0.38 -0.77 8.70 45.56 0.40 -0.38 16 28 H 0.11 0.11 7.96 -51.93 -0.41 -0.30 16 29 H -0.26 -0.75 7.11 56.52 0.40 -0.35 16 30 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 31 H 0.13 0.15 8.06 -52.49 -0.42 -0.27 16 32 H 0.12 -0.04 8.06 -52.48 -0.42 -0.47 16 33 H 0.10 -0.44 8.08 -51.93 -0.42 -0.86 16 34 H 0.11 -0.46 8.08 -51.93 -0.42 -0.88 16 35 H 0.40 -2.10 8.71 -40.82 -0.36 -2.46 16 36 H 0.09 -0.16 6.34 -51.93 -0.33 -0.49 16 37 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 38 H 0.13 -0.43 8.05 -52.49 -0.42 -0.86 16 39 H 0.13 -0.39 8.06 -52.48 -0.42 -0.82 16 40 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 41 H 0.13 -0.14 6.68 -52.49 -0.35 -0.49 16 42 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 43 H 0.10 -0.26 7.71 -51.93 -0.40 -0.66 16 44 H 0.12 -0.14 8.06 -52.48 -0.42 -0.57 16 45 H 0.13 -0.13 4.88 -52.49 -0.26 -0.38 16 LS Contribution 394.80 15.07 5.95 5.95 Total: 0.00 -8.34 394.80 -13.97 -22.30 By element: Atomic # 1 Polarization: -7.32 SS G_CDS: -5.94 Total: -13.26 kcal Atomic # 6 Polarization: 0.62 SS G_CDS: -5.98 Total: -5.36 kcal Atomic # 7 Polarization: 1.76 SS G_CDS: -0.28 Total: 1.48 kcal Atomic # 8 Polarization: -3.22 SS G_CDS: -0.36 Total: -3.58 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: -5.06 Total: -5.18 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -8.34 -13.97 -22.30 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.777 kcal (2) G-P(sol) polarization free energy of solvation -8.335 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.442 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.968 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.303 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.474 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.32 seconds