Wall clock time and date at job start Sun Mar 7 2021 01:37:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.34455 * 126.48404 * 105.02236 * 4 2 1 6 6 N 1.36560 * 109.98926 * 180.02562 * 5 4 2 7 7 C 1.37833 * 109.86073 * 0.02562 * 6 5 4 8 8 C 1.38641 * 133.38192 * 180.02562 * 7 6 5 9 9 C 1.39332 * 119.66240 * 179.25359 * 8 7 6 10 10 C 1.47580 * 119.82907 * 180.22620 * 9 8 7 11 11 O 1.21590 * 120.00217 * 0.36910 * 10 9 8 12 12 N 1.34778 * 119.99672 * 180.36412 * 10 9 8 13 13 C 1.46505 * 119.99781 * 180.02562 * 12 10 9 14 14 H 1.08995 * 112.84688 * 25.33412 * 13 12 10 15 15 C 1.53782 * 113.61112 * 156.53131 * 13 12 10 16 16 C 1.53776 * 87.07867 * 89.11852 * 15 13 12 17 17 H 1.09003 * 113.61221 * 270.87661 * 16 15 13 18 18 C 1.50705 * 113.61561 * 140.06469 * 16 15 13 19 19 C 1.38221 * 119.99424 * 119.99282 * 18 16 15 20 20 C 1.38264 * 120.01681 * 179.97438 * 19 18 16 21 21 C 1.38201 * 120.01340 * 359.97438 * 20 19 18 22 22 C 1.38348 * 119.98497 * 0.02766 * 21 20 19 23 23 Br 1.89100 * 120.00642 * 180.02562 * 22 21 20 24 24 C 1.38242 * 119.99323 * 299.72525 * 18 16 15 25 25 C 1.53782 * 113.61368 * 254.13724 * 13 12 10 26 26 C 1.40194 * 120.33727 * 0.59702 * 9 8 7 27 27 C 1.36237 * 120.37728 * 359.61527 * 26 9 8 28 28 C 1.39870 * 119.95827 * 359.97438 * 27 26 9 29 29 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 30 30 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 31 31 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 32 32 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 33 33 H 1.08000 * 125.00633 * 0.02562 * 5 4 2 34 34 H 0.97000 * 125.07527 * 180.02562 * 6 5 4 35 35 H 1.08001 * 120.17157 * 359.94947 * 8 7 6 36 36 H 0.96994 * 120.00067 * 0.02562 * 12 10 9 37 37 H 1.09006 * 113.61240 * 203.66794 * 15 13 12 38 38 H 1.09003 * 113.61768 * 334.48144 * 15 13 12 39 39 H 1.07996 * 119.99299 * 359.97438 * 19 18 16 40 40 H 1.08001 * 119.99531 * 180.02562 * 20 19 18 41 41 H 1.07994 * 120.00766 * 180.02562 * 21 20 19 42 42 H 1.07997 * 120.00362 * 0.02562 * 24 18 16 43 43 H 1.09002 * 113.61373 * 25.43759 * 25 13 12 44 44 H 1.09003 * 113.61137 * 156.33699 * 25 13 12 45 45 H 1.07994 * 119.81701 * 179.58582 * 26 9 8 46 46 H 1.07995 * 120.02075 * 179.97438 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.4619 -0.1362 -2.3244 6 7 2.8030 -1.0944 -3.2357 7 6 2.4929 -2.3428 -2.7407 8 6 2.6285 -3.6275 -3.2441 9 6 2.2236 -4.7160 -2.4745 10 6 2.3709 -6.0854 -3.0047 11 8 2.8509 -6.2618 -4.1079 12 7 1.9735 -7.1404 -2.2661 13 6 2.1203 -8.4998 -2.7923 14 1 2.9162 -8.5835 -3.5323 15 6 2.1789 -9.5802 -1.6995 16 6 0.6459 -9.6507 -1.7973 17 1 0.1335 -8.9540 -1.1338 18 6 0.0991 -11.0523 -1.7090 19 6 -0.7778 -11.3893 -0.6951 20 6 -1.2801 -12.6749 -0.6139 21 6 -0.9061 -13.6234 -1.5469 22 6 -0.0284 -13.2864 -2.5619 23 35 0.4832 -14.5836 -3.8392 24 6 0.4703 -11.9992 -2.6453 25 6 0.7928 -9.1334 -3.2408 26 6 1.6697 -4.5167 -1.2021 27 6 1.5288 -3.2575 -0.7016 28 6 1.9385 -2.1550 -1.4587 29 1 -0.3934 0.4418 -0.7650 30 1 1.7923 -0.5138 0.8899 31 1 1.5616 2.4678 1.2086 32 1 3.5346 1.7703 -0.0322 33 1 2.5983 0.9263 -2.4622 34 1 3.2038 -0.9222 -4.1020 35 1 3.0563 -3.7844 -4.2233 36 1 1.5904 -6.9996 -1.3862 37 1 2.6792 -10.4953 -2.0166 38 1 2.5401 -9.2113 -0.7395 39 1 -1.0706 -10.6483 0.0339 40 1 -1.9656 -12.9378 0.1782 41 1 -1.2988 -14.6274 -1.4837 42 1 1.1524 -11.7347 -3.4398 43 1 0.0343 -8.4035 -3.5240 44 1 0.9149 -9.9265 -3.9786 45 1 1.3525 -5.3661 -0.6155 46 1 1.1010 -3.1105 0.2791 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:37:12 Heat of formation + Delta-G solvation = 51.540578 kcal Electronic energy + Delta-G solvation = -30544.294622 eV Core-core repulsion = 26219.736402 eV Total energy + Delta-G solvation = -4324.558220 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.057 amu Computer time = 2.75 seconds Orbital eigenvalues (eV) -42.50541 -41.64033 -40.43353 -38.95964 -37.85098 -37.43855 -34.66246 -33.33543 -33.26363 -31.97115 -30.73431 -30.46788 -30.21591 -26.82351 -26.68927 -26.36459 -24.73515 -23.64467 -23.49585 -22.49329 -21.56986 -20.84452 -20.21959 -19.45788 -18.46421 -18.02581 -17.64102 -17.14651 -16.97488 -16.59222 -16.28268 -16.18142 -15.91509 -15.74579 -15.58359 -15.24406 -15.08141 -14.94633 -14.72845 -14.71434 -14.52000 -14.40885 -14.23374 -14.02420 -13.59168 -13.47197 -13.14514 -12.97397 -12.63349 -12.44891 -12.32826 -12.25175 -12.03379 -11.96601 -11.93469 -11.58031 -11.33517 -11.19263 -10.93326 -10.76829 -10.37188 -10.10952 -9.87193 -9.64233 -9.37139 -8.82989 -5.11774 -0.27814 0.07203 0.22002 0.37874 0.66496 1.26976 1.35387 1.60477 1.84779 1.95583 1.99274 2.18357 2.52261 2.91564 3.33221 3.52075 3.53004 3.54913 3.61354 3.71131 3.74458 3.76206 3.84311 3.85541 3.97030 4.06928 4.10105 4.20323 4.30082 4.34125 4.40722 4.46260 4.51188 4.54511 4.61047 4.63700 4.70890 4.78352 4.86128 4.88363 4.93924 4.96819 5.03903 5.17270 5.21991 5.29211 5.41730 5.42445 5.47578 5.57678 5.59408 5.76303 5.96869 6.34623 6.47106 6.63319 7.22487 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.030 4.030 3 Si 0.684 3.316 4 C -0.211 4.211 5 C 0.077 3.923 6 N -0.584 5.584 7 C 0.081 3.919 8 C -0.055 4.055 9 C -0.122 4.122 10 C 0.567 3.433 11 O -0.535 6.535 12 N -0.709 5.709 13 C 0.121 3.879 14 H 0.107 0.893 15 C -0.136 4.136 16 C -0.074 4.074 17 H 0.101 0.899 18 C -0.065 4.065 19 C -0.101 4.101 20 C -0.110 4.110 21 C -0.096 4.096 22 C -0.087 4.087 23 Br -0.050 7.050 24 C -0.089 4.089 25 C -0.145 4.145 26 C -0.113 4.113 27 C -0.073 4.073 28 C -0.063 4.063 29 H 0.377 0.623 30 H 0.111 0.889 31 H -0.254 1.254 32 H -0.256 1.256 33 H 0.179 0.821 34 H 0.422 0.578 35 H 0.136 0.864 36 H 0.401 0.599 37 H 0.099 0.901 38 H 0.079 0.921 39 H 0.129 0.871 40 H 0.132 0.868 41 H 0.132 0.868 42 H 0.134 0.866 43 H 0.077 0.923 44 H 0.096 0.904 45 H 0.125 0.875 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.332 4.128 1.359 4.546 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.586 3.414 4 C -0.219 4.219 5 C -0.051 4.051 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.077 4.077 9 C -0.126 4.126 10 C 0.355 3.645 11 O -0.413 6.413 12 N -0.361 5.361 13 C 0.015 3.985 14 H 0.125 0.875 15 C -0.173 4.173 16 C -0.092 4.092 17 H 0.119 0.881 18 C -0.066 4.066 19 C -0.119 4.119 20 C -0.129 4.129 21 C -0.115 4.115 22 C -0.167 4.167 23 Br 0.036 6.964 24 C -0.108 4.108 25 C -0.183 4.183 26 C -0.133 4.133 27 C -0.091 4.091 28 C -0.068 4.068 29 H 0.224 0.776 30 H 0.129 0.871 31 H -0.179 1.179 32 H -0.181 1.181 33 H 0.196 0.804 34 H 0.260 0.740 35 H 0.154 0.846 36 H 0.238 0.762 37 H 0.118 0.882 38 H 0.098 0.902 39 H 0.147 0.853 40 H 0.150 0.850 41 H 0.150 0.850 42 H 0.151 0.849 43 H 0.096 0.904 44 H 0.114 0.886 45 H 0.143 0.857 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.149 3.831 0.941 3.948 hybrid contribution -0.102 -0.271 0.508 0.584 sum -0.250 3.560 1.448 3.851 Atomic orbital electron populations 1.86507 1.17418 1.81749 1.49029 1.24328 0.84762 1.08861 0.96160 0.95274 0.80758 0.77369 0.88023 1.20736 1.10845 0.92122 0.98206 1.21753 0.99678 0.94352 0.89340 1.41723 1.54611 1.04031 1.18237 1.18074 1.03294 0.86316 0.94806 1.20081 0.99407 0.88062 1.00123 1.19401 1.05233 0.92227 0.95756 1.18151 0.77236 0.84512 0.84608 1.90799 1.44304 1.86138 1.20019 1.45556 1.64445 1.05255 1.20845 1.21840 0.98811 0.80665 0.97156 0.87520 1.23432 0.95075 0.99229 0.99613 1.21674 0.96086 0.92828 0.98639 0.88073 1.19687 0.97021 0.95033 0.94830 1.21227 0.96278 0.96683 0.97728 1.21207 0.99866 0.93055 0.98795 1.21170 0.96387 1.00432 0.93557 1.21826 1.02857 0.94348 0.97625 1.96786 1.91246 1.53686 1.54674 1.20975 0.99638 0.91024 0.99198 1.23629 0.98135 1.00699 0.95843 1.20671 1.00622 0.97314 0.94716 1.20200 0.98742 0.90497 0.99685 1.19178 1.01021 0.93074 0.93540 0.77570 0.87145 1.17871 1.18081 0.80425 0.73978 0.84581 0.76249 0.88226 0.90239 0.85343 0.84963 0.84973 0.84864 0.90408 0.88592 0.85706 0.85219 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.08 12.88 -35.23 -0.45 -0.38 16 2 C -0.03 0.02 3.06 36.01 0.11 0.13 16 3 Si 0.68 -1.49 30.75 -169.99 -5.23 -6.71 16 4 C -0.21 0.06 5.57 -102.74 -0.57 -0.52 16 5 C 0.08 -0.18 10.43 -16.78 -0.18 -0.35 16 6 N -0.58 0.96 6.07 -10.68 -0.06 0.90 16 7 C 0.08 0.09 7.26 -84.00 -0.61 -0.52 16 8 C -0.06 -0.10 9.61 -39.03 -0.37 -0.48 16 9 C -0.12 -0.20 5.87 -104.95 -0.62 -0.82 16 10 C 0.57 1.48 7.76 -12.45 -0.10 1.38 16 11 O -0.54 -3.32 15.93 5.29 0.08 -3.23 16 12 N -0.71 0.30 5.21 -54.04 -0.28 0.01 16 13 C 0.12 -0.07 4.30 -67.11 -0.29 -0.35 16 14 H 0.11 0.12 7.50 -51.93 -0.39 -0.27 16 15 C -0.14 0.29 7.29 -25.92 -0.19 0.10 16 16 C -0.07 0.15 3.87 -90.82 -0.35 -0.20 16 17 H 0.10 -0.32 8.09 -51.93 -0.42 -0.74 16 18 C -0.06 0.04 5.29 -104.62 -0.55 -0.51 16 19 C -0.10 0.09 9.71 -39.58 -0.38 -0.29 16 20 C -0.11 0.07 10.05 -39.59 -0.40 -0.33 16 21 C -0.10 -0.04 9.79 -39.55 -0.39 -0.42 16 22 C -0.09 -0.10 6.22 -39.52 -0.25 -0.34 16 23 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.37 16 24 C -0.09 -0.02 8.37 -39.56 -0.33 -0.36 16 25 C -0.14 0.14 7.27 -25.78 -0.19 -0.05 16 26 C -0.11 0.00 9.46 -39.57 -0.37 -0.37 16 27 C -0.07 -0.06 10.03 -39.69 -0.40 -0.46 16 28 C -0.06 -0.09 6.35 -105.04 -0.67 -0.76 16 29 H 0.38 -1.51 8.70 45.56 0.40 -1.11 16 30 H 0.11 0.00 7.96 -51.93 -0.41 -0.42 16 31 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 32 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 33 H 0.18 -1.07 6.35 -52.49 -0.33 -1.40 16 34 H 0.42 -1.84 8.96 -40.82 -0.37 -2.21 16 35 H 0.14 0.23 7.62 -52.49 -0.40 -0.17 16 36 H 0.40 -1.15 6.69 -40.82 -0.27 -1.43 16 37 H 0.10 -0.20 7.73 -51.93 -0.40 -0.60 16 38 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 39 H 0.13 -0.35 8.05 -52.49 -0.42 -0.78 16 40 H 0.13 -0.33 8.06 -52.49 -0.42 -0.76 16 41 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 42 H 0.13 -0.07 6.65 -52.49 -0.35 -0.42 16 43 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 44 H 0.10 -0.10 6.31 -51.93 -0.33 -0.43 16 45 H 0.13 -0.36 6.36 -52.49 -0.33 -0.69 16 46 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 LS Contribution 403.75 15.07 6.08 6.08 Total: 0.00 -9.75 403.75 -14.59 -24.33 By element: Atomic # 1 Polarization: -7.77 SS G_CDS: -5.35 Total: -13.12 kcal Atomic # 6 Polarization: 1.57 SS G_CDS: -7.09 Total: -5.52 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -0.35 Total: 0.91 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -0.37 Total: -3.61 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.23 Total: -6.71 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.37 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -9.75 -14.59 -24.33 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.872 kcal (2) G-P(sol) polarization free energy of solvation -9.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.127 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.586 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.332 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.541 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.75 seconds