Wall clock time and date at job start Sun Mar 7 2021 01:38:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35655 * 117.00333 * 2 1 4 4 C 1.40143 * 120.14847 * 179.97438 * 3 2 1 5 5 C 1.47531 * 120.19212 * 0.02562 * 4 3 2 6 6 O 1.21587 * 120.00024 * 359.97438 * 5 4 3 7 7 N 1.34781 * 119.99599 * 180.02562 * 5 4 3 8 8 C 1.46501 * 119.99552 * 179.97438 * 7 5 4 9 9 H 1.08993 * 112.91182 * 336.24587 * 8 7 5 10 10 C 1.53778 * 113.61560 * 107.49938 * 8 7 5 11 11 C 1.53778 * 87.08449 * 89.11214 * 10 8 7 12 12 H 1.08998 * 113.61879 * 270.88747 * 11 10 8 13 13 C 1.50698 * 113.69240 * 139.98944 * 11 10 8 14 14 C 1.38196 * 119.99579 * 322.19298 * 13 11 10 15 15 C 1.38351 * 119.98593 * 179.76577 * 14 13 11 16 16 Br 1.89103 * 120.00656 * 180.25338 * 15 14 13 17 17 C 1.38299 * 119.98306 * 0.52875 * 15 14 13 18 18 C 1.38244 * 119.98815 * 359.72840 * 17 15 14 19 19 C 1.38218 * 120.01094 * 359.97438 * 18 17 15 20 20 C 1.53784 * 113.61123 * 204.99529 * 8 7 5 21 21 C 1.39709 * 119.61185 * 180.28942 * 4 3 2 22 22 C 1.37788 * 119.90915 * 359.42928 * 21 4 3 23 23 C 1.50702 * 119.84991 * 180.29532 * 22 21 4 24 24 O 1.42891 * 109.47198 * 65.29901 * 23 22 21 25 25 Si 1.86298 * 109.46907 * 185.30226 * 23 22 21 26 26 C 1.38553 * 120.29856 * 0.59656 * 22 21 4 27 27 C 1.38050 * 120.38921 * 359.67468 * 26 22 21 28 28 H 1.09002 * 109.47082 * 300.01051 * 1 2 3 29 29 H 1.08999 * 109.46415 * 60.00150 * 1 2 3 30 30 H 1.08996 * 109.47400 * 180.02562 * 1 2 3 31 31 H 0.96998 * 120.00189 * 359.97438 * 7 5 4 32 32 H 1.08999 * 113.61526 * 334.56550 * 10 8 7 33 33 H 1.08999 * 113.69218 * 203.67174 * 10 8 7 34 34 H 1.07996 * 120.00380 * 359.97438 * 14 13 11 35 35 H 1.07997 * 120.00877 * 179.74620 * 17 15 14 36 36 H 1.08005 * 119.99141 * 180.02562 * 18 17 15 37 37 H 1.07994 * 119.98994 * 180.02562 * 19 18 17 38 38 H 1.09004 * 113.61451 * 156.33708 * 20 8 7 39 39 H 1.08994 * 113.61477 * 25.43010 * 20 8 7 40 40 H 1.07999 * 120.04319 * 179.69803 * 21 4 3 41 41 H 1.09001 * 109.46566 * 305.29677 * 23 22 21 42 42 H 0.96700 * 114.00222 * 60.00138 * 24 23 22 43 43 H 1.48495 * 110.00555 * 58.68197 * 25 23 22 44 44 H 1.48504 * 109.99698 * 180.02562 * 25 23 22 45 45 H 1.08006 * 119.80037 * 179.70051 * 26 22 21 46 46 H 1.08004 * 119.95456 * 180.02562 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4443 1.2855 0.0005 5 6 4.2550 0.0530 0.0005 6 8 3.7094 -1.0336 0.0005 7 7 5.6006 0.1316 0.0016 8 6 6.4057 -1.0924 0.0022 9 1 5.8709 -1.9519 0.4061 10 6 7.0992 -1.3742 -1.3411 11 6 8.2776 -0.5352 -0.8192 12 1 8.1903 0.5277 -1.0441 13 6 9.6282 -1.1000 -1.1765 14 6 9.8298 -2.4672 -1.1673 15 6 11.0685 -2.9857 -1.5001 16 35 11.3430 -4.8567 -1.4947 17 6 12.1076 -2.1351 -1.8312 18 6 11.9064 -0.7674 -1.8349 19 6 10.6670 -0.2500 -1.5083 20 6 7.8107 -0.9052 0.5987 21 6 4.0669 2.5362 0.0067 22 6 3.3040 3.6836 0.0002 23 6 3.9770 5.0319 0.0001 24 8 4.6993 5.2037 -1.2208 25 14 2.6888 6.3690 0.1530 26 6 1.9208 3.6032 0.0002 27 6 1.2926 2.3739 -0.0002 28 1 -0.3633 0.5140 0.8899 29 1 -0.3632 0.5138 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 6.0358 0.9984 0.0020 32 1 6.5914 -0.9289 -2.1966 33 1 7.3456 -2.4248 -1.4949 34 1 9.0196 -3.1308 -0.9037 35 1 13.0758 -2.5393 -2.0870 36 1 12.7177 -0.1031 -2.0938 37 1 10.5102 0.8185 -1.5117 38 1 8.2512 -1.8279 0.9765 39 1 7.8772 -0.0813 1.3091 40 1 5.1448 2.6036 0.0121 41 1 4.6666 5.0938 0.8420 42 1 4.1475 5.1602 -2.0137 43 1 1.9096 6.1831 1.4034 44 1 3.3398 7.7037 0.1535 45 1 1.3306 4.5078 0.0000 46 1 0.2139 2.3195 -0.0007 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:38:09 Heat of formation + Delta-G solvation = -9.494982 kcal Electronic energy + Delta-G solvation = -30633.583577 eV Core-core repulsion = 26309.574656 eV Total energy + Delta-G solvation = -4324.008921 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -41.94105 -41.26011 -40.05810 -39.17660 -38.71899 -37.08674 -34.76133 -33.37227 -32.67410 -31.86911 -31.49355 -30.24457 -28.53008 -26.73957 -26.54612 -26.13613 -25.09462 -23.56951 -22.83211 -22.30173 -21.57311 -20.21431 -19.42616 -18.46111 -18.21656 -17.88763 -17.21313 -16.89607 -16.82956 -16.45482 -16.20341 -16.12072 -15.82448 -15.81415 -15.77700 -15.10724 -15.05254 -14.59445 -14.54593 -14.50216 -14.41751 -14.20270 -13.70038 -13.54697 -13.48269 -13.31468 -13.10120 -12.92127 -12.43160 -12.36295 -12.13124 -12.02888 -12.01656 -11.89909 -11.79745 -11.55604 -11.33485 -11.20529 -11.03343 -10.37256 -10.28561 -10.04534 -9.83937 -9.62493 -9.28915 -4.96791 -0.26694 0.10235 0.22081 0.26389 0.63068 1.35198 1.66743 1.75891 2.00640 2.04063 2.27226 2.57002 2.67765 3.41079 3.49124 3.56854 3.61154 3.66912 3.70612 3.77364 3.83294 3.93423 3.98963 4.04900 4.15671 4.22163 4.28377 4.30624 4.36356 4.39788 4.41262 4.55676 4.57127 4.68136 4.68469 4.72527 4.73546 4.82083 4.92278 4.94895 4.96973 4.98911 5.09667 5.13537 5.21685 5.28212 5.36115 5.49437 5.56885 5.61309 5.84197 6.30101 6.50264 6.82675 7.20144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.314 6.314 3 C 0.171 3.829 4 C -0.197 4.197 5 C 0.559 3.441 6 O -0.564 6.564 7 N -0.698 5.698 8 C 0.116 3.884 9 H 0.083 0.917 10 C -0.143 4.143 11 C -0.062 4.062 12 H 0.119 0.881 13 C -0.068 4.068 14 C -0.099 4.099 15 C -0.103 4.103 16 Br -0.063 7.063 17 C -0.108 4.108 18 C -0.114 4.114 19 C -0.102 4.102 20 C -0.125 4.125 21 C -0.016 4.016 22 C -0.168 4.168 23 C -0.062 4.062 24 O -0.553 6.553 25 Si 0.767 3.233 26 C -0.041 4.041 27 C -0.212 4.212 28 H 0.072 0.928 29 H 0.075 0.925 30 H 0.106 0.894 31 H 0.412 0.588 32 H 0.069 0.931 33 H 0.092 0.908 34 H 0.134 0.866 35 H 0.138 0.862 36 H 0.153 0.847 37 H 0.151 0.849 38 H 0.098 0.902 39 H 0.090 0.910 40 H 0.151 0.849 41 H 0.113 0.887 42 H 0.396 0.604 43 H -0.285 1.285 44 H -0.302 1.302 45 H 0.159 0.841 46 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.168 7.238 -1.489 7.701 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.225 6.225 3 C 0.122 3.878 4 C -0.201 4.201 5 C 0.348 3.652 6 O -0.443 6.443 7 N -0.351 5.351 8 C 0.011 3.989 9 H 0.101 0.899 10 C -0.182 4.182 11 C -0.080 4.080 12 H 0.137 0.863 13 C -0.069 4.069 14 C -0.118 4.118 15 C -0.182 4.182 16 Br 0.023 6.977 17 C -0.127 4.127 18 C -0.132 4.132 19 C -0.120 4.120 20 C -0.163 4.163 21 C -0.035 4.035 22 C -0.168 4.168 23 C -0.172 4.172 24 O -0.361 6.361 25 Si 0.674 3.326 26 C -0.058 4.058 27 C -0.231 4.231 28 H 0.090 0.910 29 H 0.094 0.906 30 H 0.124 0.876 31 H 0.250 0.750 32 H 0.088 0.912 33 H 0.110 0.890 34 H 0.151 0.849 35 H 0.155 0.845 36 H 0.170 0.830 37 H 0.169 0.831 38 H 0.116 0.884 39 H 0.109 0.891 40 H 0.169 0.831 41 H 0.131 0.869 42 H 0.246 0.754 43 H -0.212 1.212 44 H -0.231 1.231 45 H 0.176 0.824 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.179 6.245 -0.608 6.643 hybrid contribution 0.366 -0.012 0.326 0.490 sum -1.813 6.234 -0.282 6.498 Atomic orbital electron populations 1.23446 0.76527 1.05441 1.02885 1.86338 1.23204 1.26449 1.86546 1.19432 0.91361 0.85577 0.91415 1.19388 0.91129 0.93915 1.15657 1.18312 0.82563 0.88669 0.75657 1.90815 1.72447 1.30388 1.50632 1.45444 1.04924 1.09752 1.74996 1.21808 0.91514 0.87957 0.97636 0.89904 1.23545 0.96063 1.01190 0.97398 1.21604 0.89370 1.00645 0.96379 0.86280 1.19832 0.96027 0.92308 0.98734 1.21079 0.95483 0.95932 0.99340 1.21933 0.97708 0.90307 1.08234 1.96757 1.97184 1.05894 1.97876 1.21356 0.98422 0.93933 0.99014 1.21492 0.98439 0.94436 0.98860 1.21539 0.92234 1.01214 0.97025 1.23380 0.92940 1.03777 0.96216 1.21111 1.00738 0.89142 0.92467 1.20254 0.93852 0.96009 1.06727 1.25014 1.03220 0.98618 0.90385 1.86472 1.38851 1.95021 1.15771 0.93884 0.79033 0.74113 0.85571 1.21283 0.93694 0.97830 0.93011 1.21479 1.01804 0.90899 1.08891 0.90980 0.90603 0.87551 0.74961 0.91225 0.88954 0.84866 0.84456 0.82975 0.83101 0.88401 0.89106 0.83149 0.86943 0.75436 1.21227 1.23055 0.82385 0.81981 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.31 -2.57 8.57 -68.79 -0.59 -3.16 16 3 C 0.17 0.80 6.70 22.84 0.15 0.96 16 4 C -0.20 -0.87 5.89 -20.01 -0.12 -0.98 16 5 C 0.56 4.64 7.76 86.69 0.67 5.31 16 6 O -0.56 -9.80 14.76 16.93 0.25 -9.55 16 7 N -0.70 -0.59 5.21 -443.20 -2.31 -2.90 16 8 C 0.12 0.12 4.32 45.52 0.20 0.31 16 9 H 0.08 0.52 7.46 -2.39 -0.02 0.50 16 10 C -0.14 0.06 7.26 31.12 0.23 0.29 16 11 C -0.06 0.25 3.85 -11.01 -0.04 0.21 16 12 H 0.12 -0.89 8.09 -2.39 -0.02 -0.91 16 13 C -0.07 0.08 5.29 -19.87 -0.11 -0.02 16 14 C -0.10 -0.16 8.34 22.29 0.19 0.03 16 15 C -0.10 -0.33 6.22 22.31 0.14 -0.20 16 16 Br -0.06 -0.28 33.70 -20.37 -0.69 -0.96 16 17 C -0.11 -0.12 9.79 22.29 0.22 0.09 16 18 C -0.11 0.22 10.05 22.27 0.22 0.44 16 19 C -0.10 0.28 9.71 22.27 0.22 0.50 16 20 C -0.13 0.45 7.29 31.12 0.23 0.67 16 21 C -0.02 0.03 9.16 22.52 0.21 0.23 16 22 C -0.17 0.66 5.34 -19.89 -0.11 0.55 16 23 C -0.06 0.33 2.79 71.24 0.20 0.53 16 24 O -0.55 2.65 12.83 -148.98 -1.91 0.74 16 25 Si 0.77 -4.47 29.78 68.60 2.04 -2.43 16 26 C -0.04 0.21 8.65 22.30 0.19 0.40 16 27 C -0.21 0.47 9.03 22.34 0.20 0.68 16 28 H 0.07 -0.36 7.66 -2.39 -0.02 -0.37 16 29 H 0.08 -0.42 7.66 -2.39 -0.02 -0.44 16 30 H 0.11 -0.28 8.14 -2.39 -0.02 -0.30 16 31 H 0.41 -2.16 6.73 -92.71 -0.62 -2.78 16 32 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 33 H 0.09 0.02 6.33 -2.39 -0.02 0.00 16 34 H 0.13 0.10 6.68 -2.91 -0.02 0.08 16 35 H 0.14 -0.11 8.06 -2.91 -0.02 -0.13 16 36 H 0.15 -0.98 8.06 -2.91 -0.02 -1.00 16 37 H 0.15 -1.14 8.05 -2.91 -0.02 -1.16 16 38 H 0.10 -0.28 7.71 -2.39 -0.02 -0.30 16 39 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 40 H 0.15 -0.93 6.40 -2.91 -0.02 -0.95 16 41 H 0.11 -0.54 7.96 -2.39 -0.02 -0.56 16 42 H 0.40 -4.82 8.70 -74.06 -0.64 -5.46 16 43 H -0.29 0.27 7.11 99.48 0.71 0.97 16 44 H -0.30 -0.77 7.11 99.48 0.71 -0.07 16 45 H 0.16 -1.67 4.88 -2.91 -0.01 -1.69 16 46 H 0.16 -1.19 6.30 -2.91 -0.02 -1.20 16 Total: 0.00 -24.01 397.52 0.61 -23.40 By element: Atomic # 1 Polarization: -16.04 SS G_CDS: -0.18 Total: -16.22 kcal Atomic # 6 Polarization: 7.09 SS G_CDS: 4.00 Total: 11.09 kcal Atomic # 7 Polarization: -0.59 SS G_CDS: -2.31 Total: -2.90 kcal Atomic # 8 Polarization: -9.72 SS G_CDS: -2.25 Total: -11.97 kcal Atomic # 14 Polarization: -4.47 SS G_CDS: 2.04 Total: -2.43 kcal Atomic # 35 Polarization: -0.28 SS G_CDS: -0.69 Total: -0.96 kcal Total: -24.01 0.61 -23.40 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.900 kcal (2) G-P(sol) polarization free energy of solvation -24.009 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.109 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.614 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.395 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.495 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds