Wall clock time and date at job start Sun Mar 7 2021 01:38:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86296 * 109.47164 * 2 1 4 4 C 1.50700 * 109.47515 * 120.00261 * 2 1 3 5 5 C 1.34835 * 125.65249 * 64.99756 * 4 2 1 6 6 C 1.40799 * 107.05060 * 180.02562 * 5 4 2 7 7 C 1.36106 * 106.73073 * 0.02562 * 6 5 4 8 8 C 1.47567 * 125.94113 * 179.97438 * 7 6 5 9 9 C 1.39570 * 119.95390 * 179.97438 * 8 7 6 10 10 C 1.38321 * 119.81071 * 179.74475 * 9 8 7 11 11 O 1.35679 * 120.13601 * 180.27795 * 10 9 8 12 12 C 1.40368 * 119.72536 * 0.52672 * 10 9 8 13 13 C 1.47296 * 120.04441 * 179.74794 * 12 10 9 14 14 O 1.21619 * 119.99993 * 359.45075 * 13 12 10 15 15 N 1.34777 * 119.99907 * 179.72141 * 13 12 10 16 16 C 1.46496 * 119.99875 * 179.97438 * 15 13 12 17 17 H 1.08999 * 112.85295 * 336.20319 * 16 15 13 18 18 C 1.53782 * 113.61172 * 107.50721 * 16 15 13 19 19 C 1.53786 * 87.08272 * 89.11850 * 18 16 15 20 20 H 1.09005 * 113.61007 * 270.88442 * 19 18 16 21 21 C 1.50698 * 113.61743 * 139.98646 * 19 18 16 22 22 C 1.38220 * 119.98903 * 322.22028 * 21 19 18 23 23 C 1.38268 * 120.02002 * 179.77418 * 22 21 19 24 24 C 1.38205 * 120.00665 * 0.50316 * 23 22 21 25 25 C 1.38354 * 119.98668 * 359.75498 * 24 23 22 26 26 Br 1.89092 * 120.00604 * 179.97438 * 25 24 23 27 27 C 1.38229 * 119.99729 * 142.50321 * 21 19 18 28 28 C 1.53776 * 87.07821 * 25.43195 * 19 18 16 29 29 C 1.39918 * 119.90811 * 359.47103 * 12 10 9 30 30 C 1.36390 * 120.18474 * 0.27540 * 29 12 10 31 31 O 1.34231 * 125.65611 * 245.27062 * 4 2 1 32 32 H 0.96697 * 113.99872 * 299.99750 * 1 2 3 33 33 H 1.08998 * 109.47186 * 240.00095 * 2 1 3 34 34 H 1.48501 * 110.00335 * 300.00095 * 3 2 1 35 35 H 1.48504 * 109.99999 * 61.32048 * 3 2 1 36 36 H 1.08002 * 126.47709 * 0.02562 * 5 4 2 37 37 H 1.07993 * 126.63304 * 179.97438 * 6 5 4 38 38 H 1.07994 * 120.09581 * 0.02562 * 9 8 7 39 39 H 0.96696 * 113.99776 * 270.24933 * 11 10 9 40 40 H 0.96999 * 120.00043 * 0.02562 * 15 13 12 41 41 H 1.09004 * 113.61778 * 203.66353 * 18 16 15 42 42 H 1.08996 * 113.61871 * 334.56655 * 18 16 15 43 43 H 1.08004 * 119.99428 * 0.02562 * 22 21 19 44 44 H 1.07998 * 119.99957 * 180.23597 * 23 22 21 45 45 H 1.07990 * 120.00548 * 179.72776 * 24 23 22 46 46 H 1.07995 * 120.00744 * 359.97438 * 27 21 19 47 47 H 1.09006 * 113.61290 * 220.01878 * 28 19 18 48 48 H 1.08995 * 113.61778 * 89.12530 * 28 19 18 49 49 H 1.08003 * 119.90426 * 180.25012 * 29 12 10 50 50 H 1.07995 * 119.86064 * 179.97438 * 30 29 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7569 -2.0180 1.5092 6 6 2.3802 -2.2629 2.7478 7 6 2.9067 -1.0782 3.1624 8 6 3.6547 -0.8537 4.4145 9 6 4.1417 0.4189 4.7167 10 6 4.8379 0.6271 5.8936 11 8 5.3094 1.8627 6.1967 12 6 5.0590 -0.4462 6.7707 13 6 5.8043 -0.2336 8.0233 14 8 6.2371 0.8704 8.2935 15 7 6.0112 -1.2636 8.8675 16 6 6.7529 -1.0523 10.1130 17 1 7.4193 -0.1909 10.0679 18 6 5.8675 -1.0833 11.3700 19 6 6.1200 -2.5996 11.4147 20 1 5.3951 -3.1799 10.8437 21 6 6.3342 -3.1352 12.8068 22 6 7.0425 -2.3915 13.7318 23 6 7.2355 -2.8803 15.0108 24 6 6.7290 -4.1174 15.3616 25 6 6.0245 -4.8644 14.4344 26 35 5.3319 -6.5574 14.9136 27 6 5.8273 -4.3727 13.1568 28 6 7.4269 -2.3249 10.6523 29 6 4.5655 -1.7172 6.4563 30 6 3.8751 -1.9173 5.2972 31 8 2.6225 -0.1454 2.2329 32 1 -0.3933 0.4417 0.7651 33 1 1.7923 -0.5138 -0.8900 34 1 1.5615 2.4679 -1.2085 35 1 1.5879 2.4585 1.2243 36 1 1.2371 -2.7411 0.8981 37 1 2.4302 -3.2077 3.2684 38 1 3.9716 1.2396 4.0357 39 1 6.2018 2.0350 5.8665 40 1 5.6697 -2.1451 8.6500 41 1 6.2926 -0.5448 12.2170 42 1 4.8275 -0.8193 11.1782 43 1 7.4420 -1.4265 13.4568 44 1 7.7857 -2.2972 15.7344 45 1 6.8835 -4.5010 16.3592 46 1 5.2775 -4.9556 12.4327 47 1 7.6459 -3.0634 9.8809 48 1 8.2784 -2.1260 11.3029 49 1 4.7322 -2.5422 7.1331 50 1 3.4969 -2.9005 5.0595 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:38:38 Heat of formation + Delta-G solvation = 0.052349 kcal Electronic energy + Delta-G solvation = -36145.469289 eV Core-core repulsion = 31118.513758 eV Total energy + Delta-G solvation = -5026.955531 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 470.061 amu Computer time = 1.76 seconds Orbital eigenvalues (eV) -43.77984 -41.89800 -41.11805 -39.85535 -38.67352 -38.20804 -37.85450 -34.85302 -34.24617 -33.50987 -33.08383 -32.06531 -31.34055 -30.51882 -30.11225 -27.31425 -26.86876 -26.26375 -24.56000 -24.13600 -23.62840 -22.85361 -22.36279 -22.05495 -21.40154 -20.23997 -19.68463 -18.94322 -18.61774 -18.11521 -17.70686 -17.54153 -17.30230 -16.81103 -16.66446 -16.42277 -16.22054 -16.09770 -15.92723 -15.86638 -15.44729 -15.21100 -15.03815 -14.71562 -14.57169 -14.45759 -14.37016 -14.19396 -14.05118 -13.81300 -13.73284 -13.63154 -13.59156 -13.41955 -12.99647 -12.98051 -12.78940 -12.43496 -12.08318 -12.07507 -12.04585 -11.88156 -11.61543 -11.42694 -11.19620 -11.17588 -10.87450 -10.83711 -10.66632 -10.14922 -10.01034 -9.92454 -9.66344 -9.06469 -5.03414 -0.83468 0.03154 0.06221 0.19770 0.61227 0.63229 1.07189 1.38906 1.41735 1.67174 1.88725 1.92572 1.96203 2.48794 2.58940 2.96755 3.10940 3.27728 3.29788 3.45558 3.49555 3.52239 3.61196 3.73466 3.80294 3.82057 3.85745 3.90065 3.94212 3.98801 4.10800 4.17171 4.26973 4.31442 4.33191 4.48796 4.52031 4.55409 4.59236 4.62346 4.68272 4.73813 4.79823 4.80433 4.85016 4.89167 4.94501 4.97695 5.04366 5.12810 5.14069 5.26575 5.33923 5.38481 5.41703 5.52224 5.73053 5.90888 6.18606 6.38065 6.65141 7.16294 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.035 4.035 3 Si 0.697 3.303 4 C -0.043 4.043 5 C -0.173 4.173 6 C -0.177 4.177 7 C 0.023 3.977 8 C 0.031 3.969 9 C -0.141 4.141 10 C 0.180 3.820 11 O -0.474 6.474 12 C -0.166 4.166 13 C 0.562 3.438 14 O -0.515 6.515 15 N -0.712 5.712 16 C 0.121 3.879 17 H 0.108 0.892 18 C -0.144 4.144 19 C -0.074 4.074 20 H 0.099 0.901 21 C -0.065 4.065 22 C -0.102 4.102 23 C -0.109 4.109 24 C -0.095 4.095 25 C -0.088 4.088 26 Br -0.050 7.050 27 C -0.088 4.088 28 C -0.135 4.135 29 C -0.064 4.064 30 C -0.116 4.116 31 O -0.162 6.162 32 H 0.381 0.619 33 H 0.138 0.862 34 H -0.247 1.247 35 H -0.255 1.255 36 H 0.156 0.844 37 H 0.156 0.844 38 H 0.144 0.856 39 H 0.399 0.601 40 H 0.399 0.601 41 H 0.097 0.903 42 H 0.076 0.924 43 H 0.131 0.869 44 H 0.133 0.867 45 H 0.133 0.867 46 H 0.131 0.869 47 H 0.078 0.922 48 H 0.100 0.900 49 H 0.136 0.864 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.950 -2.981 -1.473 4.445 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.596 3.404 4 C -0.093 4.093 5 C -0.192 4.192 6 C -0.196 4.196 7 C -0.027 4.027 8 C 0.031 3.969 9 C -0.159 4.159 10 C 0.133 3.867 11 O -0.286 6.286 12 C -0.169 4.169 13 C 0.350 3.650 14 O -0.390 6.390 15 N -0.364 5.364 16 C 0.016 3.984 17 H 0.126 0.874 18 C -0.183 4.183 19 C -0.093 4.093 20 H 0.117 0.883 21 C -0.066 4.066 22 C -0.120 4.120 23 C -0.128 4.128 24 C -0.115 4.115 25 C -0.167 4.167 26 Br 0.036 6.964 27 C -0.108 4.108 28 C -0.173 4.173 29 C -0.083 4.083 30 C -0.134 4.134 31 O -0.059 6.059 32 H 0.229 0.771 33 H 0.156 0.844 34 H -0.172 1.172 35 H -0.179 1.179 36 H 0.173 0.827 37 H 0.174 0.826 38 H 0.162 0.838 39 H 0.258 0.742 40 H 0.235 0.765 41 H 0.115 0.885 42 H 0.095 0.905 43 H 0.149 0.851 44 H 0.151 0.849 45 H 0.150 0.850 46 H 0.149 0.851 47 H 0.097 0.903 48 H 0.118 0.882 49 H 0.153 0.847 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.430 -1.887 -1.354 3.361 hybrid contribution -0.818 -0.752 0.262 1.142 sum 1.612 -2.639 -1.093 3.280 Atomic orbital electron populations 1.86667 1.16630 1.80146 1.49266 1.24359 0.84026 1.12194 0.93829 0.94491 0.91410 0.73325 0.81143 1.22945 1.00624 0.93788 0.91984 1.21588 1.03928 0.95712 0.97979 1.21914 1.01921 0.98392 0.97354 1.20319 1.03827 0.87474 0.91085 1.17760 0.95456 0.93741 0.89983 1.21600 1.00332 0.97093 0.96907 1.18283 0.93841 0.84078 0.90495 1.84777 1.36534 1.27467 1.79787 1.20463 1.04764 0.94336 0.97387 1.17962 0.79617 0.84438 0.83008 1.90849 1.49452 1.23399 1.75331 1.45580 1.57594 1.12218 1.21049 1.21835 0.94089 0.99487 0.82992 0.87391 1.23586 1.01595 0.94719 0.98352 1.21624 0.98591 0.96690 0.92381 0.88271 1.19674 0.97544 0.93826 0.95523 1.21185 0.97790 0.99945 0.93085 1.21207 0.99523 0.95396 0.96698 1.21178 0.96665 0.94483 0.99181 1.21845 1.03973 0.93957 0.96947 1.96783 1.85164 1.21527 1.92961 1.21014 0.99445 0.95679 0.94637 1.23440 0.97004 0.97150 0.99693 1.20807 0.95549 0.95472 0.96453 1.20702 1.00219 0.98758 0.93729 1.83947 1.57772 1.37772 1.26380 0.77072 0.84402 1.17154 1.17882 0.82659 0.82611 0.83823 0.74180 0.76502 0.88489 0.90495 0.85146 0.84906 0.84956 0.85093 0.90301 0.88159 0.84652 0.84333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.16 12.88 -35.23 -0.45 -0.62 16 2 C -0.03 0.03 2.98 36.01 0.11 0.14 16 3 Si 0.70 -0.72 32.11 -169.99 -5.46 -6.18 16 4 C -0.04 -0.01 6.21 -35.52 -0.22 -0.23 16 5 C -0.17 -0.02 10.78 -39.82 -0.43 -0.45 16 6 C -0.18 0.05 10.26 -39.38 -0.40 -0.35 16 7 C 0.02 0.01 7.02 -36.54 -0.26 -0.24 16 8 C 0.03 0.00 5.87 -104.95 -0.62 -0.62 16 9 C -0.14 -0.08 9.65 -39.05 -0.38 -0.45 16 10 C 0.18 0.24 6.71 -38.75 -0.26 -0.02 16 11 O -0.47 -0.99 11.56 -40.70 -0.47 -1.46 16 12 C -0.17 -0.07 5.89 -104.78 -0.62 -0.69 16 13 C 0.56 0.90 7.75 -12.58 -0.10 0.80 16 14 O -0.51 -2.70 14.74 -16.70 -0.25 -2.95 16 15 N -0.71 1.08 5.21 -54.13 -0.28 0.79 16 16 C 0.12 -0.19 4.33 -67.12 -0.29 -0.48 16 17 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 18 C -0.14 0.26 7.25 -25.92 -0.19 0.07 16 19 C -0.07 0.20 3.86 -90.96 -0.35 -0.15 16 20 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 21 C -0.06 0.07 5.29 -104.63 -0.55 -0.48 16 22 C -0.10 0.13 8.60 -39.58 -0.34 -0.21 16 23 C -0.11 0.11 10.05 -39.58 -0.40 -0.29 16 24 C -0.10 -0.01 9.79 -39.55 -0.39 -0.39 16 25 C -0.09 -0.06 6.22 -39.51 -0.25 -0.31 16 26 Br -0.05 -0.05 33.70 -68.01 -2.29 -2.35 16 27 C -0.09 0.01 9.45 -39.56 -0.37 -0.36 16 28 C -0.13 0.42 7.29 -25.92 -0.19 0.23 16 29 C -0.06 0.14 9.47 -39.62 -0.38 -0.23 16 30 C -0.12 0.22 9.48 -39.60 -0.38 -0.15 16 31 O -0.16 -0.18 8.79 4.75 0.04 -0.14 16 32 H 0.38 -0.86 8.70 45.56 0.40 -0.47 16 33 H 0.14 -0.34 7.96 -51.93 -0.41 -0.76 16 34 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 35 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 36 H 0.16 -0.16 8.06 -52.49 -0.42 -0.58 16 37 H 0.16 -0.41 7.24 -52.49 -0.38 -0.79 16 38 H 0.14 0.00 7.89 -52.49 -0.41 -0.41 16 39 H 0.40 -0.71 9.06 45.56 0.41 -0.30 16 40 H 0.40 -1.65 6.71 -40.82 -0.27 -1.93 16 41 H 0.10 -0.21 6.32 -51.93 -0.33 -0.54 16 42 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.13 -0.38 6.67 -52.48 -0.35 -0.73 16 44 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 45 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 46 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 47 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 48 H 0.10 -0.32 7.71 -51.93 -0.40 -0.72 16 49 H 0.14 -0.72 6.38 -52.48 -0.33 -1.06 16 50 H 0.14 -0.58 6.95 -52.49 -0.37 -0.94 16 LS Contribution 443.06 15.07 6.68 6.68 Total: 0.00 -9.90 443.06 -14.71 -24.62 By element: Atomic # 1 Polarization: -8.53 SS G_CDS: -4.99 Total: -13.52 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -7.24 Total: -4.88 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -0.28 Total: 0.79 kcal Atomic # 8 Polarization: -4.04 SS G_CDS: -1.13 Total: -5.17 kcal Atomic # 14 Polarization: -0.72 SS G_CDS: -5.46 Total: -6.18 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 6.68 Total: 6.68 kcal Total: -9.90 -14.71 -24.62 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.668 kcal (2) G-P(sol) polarization free energy of solvation -9.901 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.767 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.714 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.615 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.052 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.76 seconds