Wall clock time and date at job start Sun Mar 7 2021 01:38:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.39288 * 121.03351 * 2 1 4 4 C 1.46492 * 134.19530 * 359.95733 * 3 2 1 5 5 C 1.50697 * 126.60368 * 0.04420 * 4 3 2 6 6 O 1.42895 * 109.47467 * 74.99888 * 5 4 3 7 7 Si 1.86303 * 109.47353 * 195.00105 * 5 4 3 8 8 C 1.34184 * 106.80163 * 180.02562 * 4 3 2 9 9 N 1.36952 * 109.94818 * 0.02562 * 8 4 3 10 10 C 1.37151 * 110.11619 * 0.02562 * 9 8 4 11 11 N 1.32824 * 132.96809 * 180.02562 * 10 9 8 12 12 C 1.31306 * 121.89028 * 179.73362 * 11 10 9 13 13 C 1.39753 * 121.03090 * 179.97438 * 2 1 3 14 14 C 1.47663 * 120.45346 * 0.02613 * 13 2 1 15 15 O 1.21574 * 119.99891 * 354.29218 * 14 13 2 16 16 N 1.34780 * 119.99769 * 174.30059 * 14 13 2 17 17 C 1.46501 * 119.99437 * 180.27556 * 16 14 13 18 18 H 1.08991 * 112.85741 * 25.05308 * 17 16 14 19 19 C 1.53786 * 113.61228 * 156.25210 * 17 16 14 20 20 C 1.53783 * 87.08071 * 89.11259 * 19 17 16 21 21 H 1.08997 * 113.61204 * 270.88234 * 20 19 17 22 22 C 1.50697 * 113.61296 * 140.06636 * 20 19 17 23 23 C 1.38197 * 119.99726 * 299.72567 * 22 20 19 24 24 C 1.38343 * 119.99346 * 179.75053 * 23 22 20 25 25 Br 1.89101 * 120.01483 * 180.26881 * 24 23 22 26 26 C 1.38308 * 119.97900 * 0.52304 * 24 23 22 27 27 C 1.38239 * 119.98793 * 359.73057 * 26 24 23 28 28 C 1.38219 * 120.01027 * 0.02562 * 27 26 24 29 29 C 1.53787 * 113.61185 * 253.85428 * 17 16 14 30 30 H 1.09005 * 109.47380 * 263.73230 * 1 2 3 31 31 H 1.09003 * 109.46963 * 23.73430 * 1 2 3 32 32 H 1.08998 * 109.47408 * 143.73085 * 1 2 3 33 33 H 1.09001 * 109.46913 * 314.99903 * 5 4 3 34 34 H 0.96697 * 114.00327 * 180.02562 * 6 5 4 35 35 H 1.48507 * 109.99854 * 299.99975 * 7 5 4 36 36 H 1.48503 * 109.99994 * 61.31396 * 7 5 4 37 37 H 1.07995 * 125.02920 * 180.02562 * 8 4 3 38 38 H 0.96998 * 124.94045 * 179.97438 * 9 8 4 39 39 H 1.08004 * 119.31190 * 180.27001 * 12 11 10 40 40 H 0.96997 * 120.00261 * 359.97438 * 16 14 13 41 41 H 1.09004 * 113.61244 * 203.65943 * 19 17 16 42 42 H 1.08999 * 113.61327 * 334.56154 * 19 17 16 43 43 H 1.08003 * 120.00333 * 0.02562 * 23 22 20 44 44 H 1.07996 * 120.00531 * 179.70619 * 26 24 23 45 45 H 1.07997 * 119.99454 * 180.02562 * 27 26 24 46 46 H 1.08003 * 119.98978 * 179.97438 * 28 27 26 47 47 H 1.09003 * 113.61302 * 25.43826 * 29 17 16 48 48 H 1.09003 * 113.61009 * 156.33922 * 29 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8515 2.6100 -0.0008 5 6 0.4527 3.1705 -0.0010 6 8 -0.1191 3.0247 1.3005 7 14 0.5070 4.9761 -0.4566 8 6 2.9947 3.3126 -0.0009 9 7 4.0669 2.4604 -0.0008 10 6 3.6348 1.1588 -0.0012 11 7 4.2720 -0.0066 -0.0009 12 6 3.6266 -1.1501 0.0037 13 6 2.2274 -1.1975 0.0005 14 6 1.5224 -2.4950 0.0005 15 8 0.3116 -2.5290 0.1048 16 7 2.2214 -3.6416 -0.1149 17 6 1.5214 -4.9286 -0.1209 18 1 0.4882 -4.8470 -0.4582 19 6 2.3081 -6.0544 -0.8127 20 6 2.9429 -6.3457 0.5573 21 1 3.8523 -5.7756 0.7472 22 6 3.1023 -7.8156 0.8485 23 6 1.9912 -8.6364 0.8892 24 6 2.1381 -9.9868 1.1515 25 35 0.6189 -11.1117 1.1998 26 6 3.3960 -10.5129 1.3835 27 6 4.5064 -9.6902 1.3478 28 6 4.3596 -8.3420 1.0808 29 6 1.6818 -5.7232 1.1859 30 1 -0.3634 -0.1122 1.0216 31 1 -0.3633 0.9408 -0.4136 32 1 -0.3634 -0.8285 -0.6079 33 1 -0.1549 2.6306 -0.7273 34 1 -1.0214 3.3645 1.3740 35 1 1.3325 5.7233 0.5261 36 1 1.0703 5.1388 -1.8210 37 1 3.0599 4.3906 -0.0010 38 1 4.9965 2.7372 -0.0012 39 1 4.1869 -2.0735 0.0082 40 1 3.1874 -3.6145 -0.1983 41 1 1.6783 -6.8634 -1.1830 42 1 3.0198 -5.6964 -1.5566 43 1 1.0087 -8.2244 0.7119 44 1 3.5107 -11.5661 1.5930 45 1 5.4887 -10.1009 1.5286 46 1 5.2273 -7.6995 1.0534 47 1 1.8883 -5.0979 2.0546 48 1 0.8811 -6.4418 1.3610 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:38:41 Heat of formation + Delta-G solvation = 73.041780 kcal Electronic energy + Delta-G solvation = -33415.474394 eV Core-core repulsion = 28870.885006 eV Total energy + Delta-G solvation = -4544.589388 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 442.068 amu Computer time = 1.66 seconds Orbital eigenvalues (eV) -42.96146 -41.63857 -40.58189 -39.17582 -38.51792 -37.66857 -35.29433 -34.67744 -33.32611 -32.20085 -31.96447 -30.84045 -30.22080 -28.98130 -26.70728 -26.68545 -26.13576 -24.78675 -24.12408 -23.44236 -22.45264 -22.04978 -20.47957 -20.18285 -19.34186 -18.81801 -18.32775 -18.03951 -17.64529 -17.21693 -16.79516 -16.57179 -16.38676 -16.14495 -15.81238 -15.53864 -15.31829 -15.15745 -15.13555 -14.76836 -14.71959 -14.47130 -14.29817 -14.19238 -14.09820 -13.79541 -13.69949 -13.44740 -13.39835 -13.32623 -13.04395 -12.89356 -12.59960 -12.33750 -11.99889 -11.94642 -11.86311 -11.52988 -11.31122 -11.27683 -11.18601 -11.16861 -10.50403 -10.15162 -10.11309 -9.82934 -9.71258 -9.60417 -9.25450 -4.91519 -0.41938 -0.17643 0.11969 0.28331 0.64760 1.23628 1.33675 1.52575 1.72434 1.75644 1.98193 1.99998 2.58947 2.68310 3.21286 3.33979 3.45314 3.47094 3.59838 3.62703 3.66879 3.74129 3.84280 3.85638 3.96704 4.03294 4.05723 4.07583 4.23863 4.25439 4.28999 4.30925 4.43234 4.54172 4.59467 4.68492 4.70735 4.75713 4.77778 4.86175 4.92564 4.97333 5.00596 5.03880 5.09398 5.14774 5.19474 5.23347 5.33477 5.38516 5.51734 5.61647 5.64414 5.86078 6.07178 6.45427 6.72356 6.98249 7.14908 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C 0.067 3.933 3 C -0.168 4.168 4 C -0.157 4.157 5 C -0.056 4.056 6 O -0.564 6.564 7 Si 0.784 3.216 8 C 0.065 3.935 9 N -0.562 5.562 10 C 0.288 3.712 11 N -0.516 5.516 12 C 0.185 3.815 13 C -0.241 4.241 14 C 0.575 3.425 15 O -0.561 6.561 16 N -0.695 5.695 17 C 0.119 3.881 18 H 0.089 0.911 19 C -0.125 4.125 20 C -0.065 4.065 21 H 0.121 0.879 22 C -0.067 4.067 23 C -0.098 4.098 24 C -0.103 4.103 25 Br -0.063 7.063 26 C -0.109 4.109 27 C -0.115 4.115 28 C -0.103 4.103 29 C -0.145 4.145 30 H 0.077 0.923 31 H 0.079 0.921 32 H 0.086 0.914 33 H 0.082 0.918 34 H 0.400 0.600 35 H -0.281 1.281 36 H -0.287 1.287 37 H 0.199 0.801 38 H 0.437 0.563 39 H 0.199 0.801 40 H 0.414 0.586 41 H 0.098 0.902 42 H 0.093 0.907 43 H 0.135 0.865 44 H 0.136 0.864 45 H 0.151 0.849 46 H 0.152 0.848 47 H 0.069 0.931 48 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.561 3.716 -1.950 4.916 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C 0.059 3.941 3 C -0.175 4.175 4 C -0.164 4.164 5 C -0.164 4.164 6 O -0.373 6.373 7 Si 0.687 3.313 8 C -0.062 4.062 9 N -0.168 5.168 10 C 0.055 3.945 11 N -0.230 5.230 12 C 0.016 3.984 13 C -0.248 4.248 14 C 0.364 3.636 15 O -0.441 6.441 16 N -0.347 5.347 17 C 0.014 3.986 18 H 0.107 0.893 19 C -0.163 4.163 20 C -0.083 4.083 21 H 0.139 0.861 22 C -0.068 4.068 23 C -0.118 4.118 24 C -0.182 4.182 25 Br 0.022 6.978 26 C -0.129 4.129 27 C -0.133 4.133 28 C -0.121 4.121 29 C -0.183 4.183 30 H 0.095 0.905 31 H 0.098 0.902 32 H 0.105 0.895 33 H 0.100 0.900 34 H 0.251 0.749 35 H -0.208 1.208 36 H -0.214 1.214 37 H 0.215 0.785 38 H 0.278 0.722 39 H 0.216 0.784 40 H 0.252 0.748 41 H 0.116 0.884 42 H 0.111 0.889 43 H 0.153 0.847 44 H 0.154 0.846 45 H 0.169 0.831 46 H 0.169 0.831 47 H 0.088 0.912 48 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 3.241 3.833 -1.964 5.390 hybrid contribution 0.565 -0.422 0.145 0.720 sum 3.806 3.411 -1.818 5.425 Atomic orbital electron populations 1.21052 0.88634 1.03705 1.03491 1.20138 0.97617 0.89751 0.86617 1.19716 0.93283 0.94185 1.10347 1.20014 0.94883 0.90364 1.11184 1.24404 0.90401 1.12668 0.88975 1.86491 1.35441 1.86435 1.28958 0.93787 0.88725 0.72738 0.76061 1.22012 0.85034 0.96487 1.02662 1.41509 1.10244 1.02035 1.63049 1.18769 0.89626 0.86671 0.99416 1.66532 1.40788 0.96294 1.19345 1.23067 0.89838 0.95226 0.90284 1.20520 0.95400 0.93433 1.15457 1.17883 0.86440 0.83754 0.75556 1.90744 1.14944 1.87426 1.50938 1.45407 1.11042 1.04282 1.73958 1.21828 0.97392 0.81985 0.97417 0.89305 1.23373 0.99492 0.97134 0.96271 1.21699 0.99212 0.90650 0.96725 0.86107 1.19854 0.92612 0.95662 0.98707 1.21094 1.00176 0.91193 0.99317 1.21939 0.92720 0.94888 1.08667 1.96758 1.37760 1.65488 1.97765 1.21348 0.91066 1.01211 0.99235 1.21482 0.99153 0.93834 0.98876 1.21546 0.97642 0.95641 0.97241 1.23607 0.98090 0.99100 0.97528 0.90478 0.90216 0.89514 0.90002 0.74871 1.20770 1.21387 0.78473 0.72184 0.78410 0.74814 0.88392 0.88881 0.84704 0.84602 0.83136 0.83077 0.91212 0.88947 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.78 8.69 71.23 0.62 -0.16 16 2 C 0.07 0.56 5.98 -19.25 -0.12 0.45 16 3 C -0.17 -1.42 6.16 -20.19 -0.12 -1.54 16 4 C -0.16 -0.79 5.61 -18.64 -0.10 -0.90 16 5 C -0.06 0.03 2.05 71.23 0.15 0.17 16 6 O -0.56 -0.10 12.86 -148.98 -1.92 -2.01 16 7 Si 0.78 -3.73 30.80 68.60 2.11 -1.62 16 8 C 0.06 0.12 10.44 82.97 0.87 0.98 16 9 N -0.56 -1.18 6.04 -192.25 -1.16 -2.34 16 10 C 0.29 2.13 8.42 134.02 1.13 3.26 16 11 N -0.52 -3.23 10.37 -191.75 -1.99 -5.22 16 12 C 0.18 0.36 10.67 85.20 0.91 1.27 16 13 C -0.24 -1.30 5.89 -19.99 -0.12 -1.41 16 14 C 0.58 2.93 7.72 86.73 0.67 3.60 16 15 O -0.56 -6.60 13.10 -3.95 -0.05 -6.65 16 16 N -0.69 1.61 5.22 -443.07 -2.31 -0.70 16 17 C 0.12 -0.25 4.30 45.52 0.20 -0.06 16 18 H 0.09 0.20 7.50 -2.39 -0.02 0.18 16 19 C -0.12 0.75 7.29 31.12 0.23 0.98 16 20 C -0.06 0.39 3.87 -10.92 -0.04 0.34 16 21 H 0.12 -1.16 8.09 -2.39 -0.02 -1.18 16 22 C -0.07 0.17 5.29 -19.87 -0.11 0.06 16 23 C -0.10 -0.05 8.37 22.29 0.19 0.14 16 24 C -0.10 -0.26 6.22 22.31 0.14 -0.12 16 25 Br -0.06 -0.24 33.70 -20.37 -0.69 -0.93 16 26 C -0.11 -0.08 9.79 22.29 0.22 0.14 16 27 C -0.11 0.27 10.05 22.27 0.22 0.50 16 28 C -0.10 0.37 9.71 22.27 0.22 0.59 16 29 C -0.14 0.38 7.27 31.21 0.23 0.61 16 30 H 0.08 0.66 8.14 -2.38 -0.02 0.65 16 31 H 0.08 0.29 5.05 -2.39 -0.01 0.27 16 32 H 0.09 0.79 5.94 -2.39 -0.01 0.77 16 33 H 0.08 -0.21 6.05 -2.39 -0.01 -0.22 16 34 H 0.40 -4.10 8.74 -74.06 -0.65 -4.74 16 35 H -0.28 -0.03 7.04 99.48 0.70 0.67 16 36 H -0.29 -0.17 7.11 99.48 0.71 0.54 16 37 H 0.20 -0.70 6.31 -2.91 -0.02 -0.72 16 38 H 0.44 -1.62 8.96 -92.71 -0.83 -2.45 16 39 H 0.20 -1.43 6.43 -2.91 -0.02 -1.45 16 40 H 0.41 -3.54 6.78 -92.71 -0.63 -4.17 16 41 H 0.10 -0.50 7.73 -2.38 -0.02 -0.52 16 42 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 43 H 0.14 -0.09 6.65 -2.91 -0.02 -0.11 16 44 H 0.14 -0.13 8.06 -2.91 -0.02 -0.16 16 45 H 0.15 -1.00 8.06 -2.91 -0.02 -1.03 16 46 H 0.15 -1.28 8.05 -2.91 -0.02 -1.31 16 47 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 48 H 0.09 -0.17 6.31 -2.39 -0.02 -0.19 16 Total: 0.00 -24.95 409.16 -1.63 -26.58 By element: Atomic # 1 Polarization: -15.00 SS G_CDS: -1.00 Total: -16.00 kcal Atomic # 6 Polarization: 3.53 SS G_CDS: 5.36 Total: 8.89 kcal Atomic # 7 Polarization: -2.80 SS G_CDS: -5.46 Total: -8.26 kcal Atomic # 8 Polarization: -6.69 SS G_CDS: -1.97 Total: -8.66 kcal Atomic # 14 Polarization: -3.73 SS G_CDS: 2.11 Total: -1.62 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -0.69 Total: -0.93 kcal Total: -24.95 -1.63 -26.58 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.624 kcal (2) G-P(sol) polarization free energy of solvation -24.949 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 74.675 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.633 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.582 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.042 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds