Wall clock time and date at job start Sun Mar 7 2021 01:39:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86296 * 109.47202 * 2 1 4 4 C 1.50692 * 109.47262 * 120.00318 * 2 1 3 5 5 C 1.34713 * 125.66792 * 64.99396 * 4 2 1 6 6 C 1.40967 * 107.03207 * 180.02562 * 5 4 2 7 7 C 1.35936 * 106.73848 * 0.02562 * 6 5 4 8 8 C 1.47816 * 125.92443 * 179.97438 * 7 6 5 9 9 C 1.39176 * 119.99741 * 179.97438 * 8 7 6 10 10 C 1.39464 * 119.75762 * 180.02562 * 9 8 7 11 11 C 1.47570 * 120.12182 * 179.97438 * 10 9 8 12 12 O 1.21586 * 120.00023 * 180.02562 * 11 10 9 13 13 N 1.34771 * 120.00093 * 359.97438 * 11 10 9 14 14 C 1.46493 * 120.00228 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.85052 * 334.66224 * 14 13 11 16 16 C 1.53782 * 113.61549 * 105.86149 * 14 13 11 17 17 C 1.54057 * 86.98287 * 89.16400 * 16 14 13 18 18 H 1.08992 * 113.61214 * 270.88020 * 17 16 14 19 19 C 1.50697 * 113.69350 * 139.98770 * 17 16 14 20 20 C 1.38217 * 120.00192 * 322.19118 * 19 17 16 21 21 C 1.38262 * 120.02339 * 179.76426 * 20 19 17 22 22 C 1.38189 * 120.00908 * 0.51127 * 21 20 19 23 23 C 1.38344 * 119.99068 * 359.74357 * 22 21 20 24 24 Br 1.89107 * 120.00998 * 179.97438 * 23 22 21 25 25 C 1.38245 * 119.99363 * 142.46285 * 19 17 16 26 26 C 1.53784 * 87.07746 * 25.43429 * 17 16 14 27 27 C 1.40208 * 119.75909 * 0.02562 * 10 9 8 28 28 O 1.35645 * 120.00734 * 180.02562 * 27 10 9 29 29 C 1.38829 * 119.99328 * 0.02562 * 27 10 9 30 30 C 1.37769 * 120.24075 * 359.71289 * 29 27 10 31 31 O 1.34341 * 125.66563 * 245.32978 * 4 2 1 32 32 H 0.96701 * 113.99804 * 299.99991 * 1 2 3 33 33 H 1.09004 * 109.47286 * 240.00231 * 2 1 3 34 34 H 1.48501 * 110.00278 * 300.00271 * 3 2 1 35 35 H 1.48506 * 109.99974 * 61.32080 * 3 2 1 36 36 H 1.07998 * 126.48058 * 0.04728 * 5 4 2 37 37 H 1.08000 * 126.62699 * 180.02562 * 6 5 4 38 38 H 1.07998 * 120.12199 * 0.02838 * 9 8 7 39 39 H 0.97001 * 119.99843 * 0.02562 * 13 11 10 40 40 H 1.08999 * 113.61489 * 203.66439 * 16 14 13 41 41 H 1.08991 * 113.61458 * 334.56889 * 16 14 13 42 42 H 1.08009 * 119.98619 * 0.02562 * 20 19 17 43 43 H 1.08005 * 119.99293 * 180.23187 * 21 20 19 44 44 H 1.08005 * 120.00329 * 179.72327 * 22 21 20 45 45 H 1.08002 * 120.00730 * 359.96286 * 25 19 17 46 46 H 1.08997 * 113.61069 * 220.02518 * 26 17 16 47 47 H 1.08999 * 113.69228 * 89.13122 * 26 17 16 48 48 H 0.96703 * 113.99830 * 90.00488 * 28 27 10 49 49 H 1.07997 * 119.87418 * 179.97438 * 29 27 10 50 50 H 1.07998 * 119.87372 * 180.29582 * 30 29 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2303 5 6 1.7570 -2.0168 1.5093 6 6 2.3813 -2.2611 2.7493 7 6 2.9070 -1.0777 3.1629 8 6 3.6563 -0.8526 4.4170 9 6 4.1423 0.4160 4.7191 10 6 4.8491 0.6226 5.9035 11 6 5.3686 1.9644 6.2315 12 8 5.9848 2.1419 7.2644 13 7 5.1608 2.9928 5.3855 14 6 5.6770 4.3246 5.7108 15 1 5.8051 4.4789 6.7822 16 6 6.9055 4.7293 4.8790 17 6 5.9162 5.3060 3.8484 18 1 5.5976 4.5834 3.0972 19 6 6.3605 6.6155 3.2495 20 6 7.0033 7.5526 4.0362 21 6 7.4156 8.7522 3.4860 22 6 7.1756 9.0191 2.1515 23 6 6.5276 8.0836 1.3648 24 35 6.1983 8.4486 -0.4613 25 6 6.1201 6.8817 1.9143 26 6 4.9214 5.4662 5.0103 27 6 5.0652 -0.4493 6.7810 28 8 5.7515 -0.2539 7.9346 29 6 4.5767 -1.7108 6.4691 30 6 3.8739 -1.9136 5.3016 31 8 2.6220 -0.1449 2.2343 32 1 -0.3933 0.4417 0.7651 33 1 1.7924 -0.5138 -0.8900 34 1 1.5615 2.4679 -1.2084 35 1 1.5879 2.4585 1.2243 36 1 1.2376 -2.7401 0.8982 37 1 2.4321 -3.2059 3.2700 38 1 3.9728 1.2375 4.0388 39 1 4.6695 2.8510 4.5613 40 1 7.5273 5.4856 5.3580 41 1 7.4799 3.8808 4.5075 42 1 7.1874 7.3460 5.0802 43 1 7.9212 9.4825 4.1003 44 1 7.4937 9.9580 1.7228 45 1 5.6145 6.1510 1.3004 46 1 3.8953 5.2122 4.7446 47 1 5.0006 6.4233 5.5258 48 1 5.1951 -0.0081 8.6864 49 1 4.7446 -2.5353 7.1462 50 1 3.4925 -2.8964 5.0671 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:13 Heat of formation + Delta-G solvation = -0.509514 kcal Electronic energy + Delta-G solvation = -37342.982966 eV Core-core repulsion = 32316.003071 eV Total energy + Delta-G solvation = -5026.979895 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 470.061 amu Computer time = 1.76 seconds Orbital eigenvalues (eV) -43.76118 -41.88429 -41.10416 -39.85134 -38.66077 -38.24611 -37.84271 -34.81248 -34.22762 -33.26478 -32.82968 -32.60537 -31.74605 -30.15947 -30.07887 -26.86156 -26.63554 -26.46416 -25.23244 -23.73988 -23.58396 -23.08012 -22.53228 -21.89638 -21.25720 -20.23783 -19.60671 -19.22033 -18.51176 -18.12119 -17.67758 -17.52355 -17.20448 -16.82145 -16.68812 -16.43501 -16.31674 -16.15262 -15.89769 -15.83755 -15.46334 -15.19024 -15.02634 -14.67791 -14.54439 -14.49135 -14.37097 -14.27207 -14.03263 -13.85182 -13.70074 -13.60370 -13.44996 -13.26782 -13.18498 -12.98835 -12.94432 -12.42352 -12.12477 -12.06564 -12.03388 -11.88204 -11.60578 -11.41438 -11.18360 -11.12111 -10.86509 -10.83242 -10.51873 -10.36982 -10.10591 -9.91133 -9.65121 -8.96843 -5.08641 -0.61720 -0.28254 0.04461 0.21074 0.64458 0.71385 1.04239 1.39205 1.43514 1.62353 1.84784 1.88057 1.95066 2.50003 2.57520 3.03769 3.08750 3.21191 3.28738 3.41161 3.47905 3.52702 3.58443 3.74126 3.81022 3.82873 3.91837 3.92602 3.96525 3.99930 4.10036 4.18562 4.25389 4.32326 4.32929 4.50188 4.52939 4.55380 4.57009 4.60676 4.69344 4.72412 4.77754 4.81580 4.85951 4.90804 4.94854 4.98343 5.05961 5.10055 5.15319 5.27734 5.35060 5.38579 5.40442 5.52913 5.74319 5.91381 6.17373 6.37146 6.62183 7.14992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.034 4.034 3 Si 0.695 3.305 4 C -0.049 4.049 5 C -0.169 4.169 6 C -0.188 4.188 7 C 0.035 3.965 8 C -0.034 4.034 9 C -0.054 4.054 10 C -0.164 4.164 11 C 0.564 3.436 12 O -0.513 6.513 13 N -0.712 5.712 14 C 0.122 3.878 15 H 0.107 0.893 16 C -0.143 4.143 17 C -0.075 4.075 18 H 0.100 0.900 19 C -0.065 4.065 20 C -0.102 4.102 21 C -0.110 4.110 22 C -0.095 4.095 23 C -0.088 4.088 24 Br -0.050 7.050 25 C -0.088 4.088 26 C -0.136 4.136 27 C 0.181 3.819 28 O -0.475 6.475 29 C -0.148 4.148 30 C -0.052 4.052 31 O -0.166 6.166 32 H 0.380 0.620 33 H 0.137 0.863 34 H -0.247 1.247 35 H -0.254 1.254 36 H 0.154 0.846 37 H 0.155 0.845 38 H 0.135 0.865 39 H 0.399 0.601 40 H 0.097 0.903 41 H 0.077 0.923 42 H 0.131 0.869 43 H 0.133 0.867 44 H 0.132 0.868 45 H 0.132 0.868 46 H 0.078 0.922 47 H 0.100 0.900 48 H 0.400 0.600 49 H 0.146 0.854 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.211 -1.059 0.433 1.666 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.594 3.406 4 C -0.099 4.099 5 C -0.188 4.188 6 C -0.207 4.207 7 C -0.015 4.015 8 C -0.034 4.034 9 C -0.073 4.073 10 C -0.168 4.168 11 C 0.351 3.649 12 O -0.389 6.389 13 N -0.365 5.365 14 C 0.016 3.984 15 H 0.125 0.875 16 C -0.181 4.181 17 C -0.093 4.093 18 H 0.118 0.882 19 C -0.065 4.065 20 C -0.120 4.120 21 C -0.128 4.128 22 C -0.115 4.115 23 C -0.167 4.167 24 Br 0.036 6.964 25 C -0.108 4.108 26 C -0.174 4.174 27 C 0.134 3.866 28 O -0.287 6.287 29 C -0.167 4.167 30 C -0.071 4.071 31 O -0.064 6.064 32 H 0.228 0.772 33 H 0.155 0.845 34 H -0.172 1.172 35 H -0.178 1.178 36 H 0.172 0.828 37 H 0.172 0.828 38 H 0.153 0.847 39 H 0.235 0.765 40 H 0.115 0.885 41 H 0.096 0.904 42 H 0.148 0.852 43 H 0.151 0.849 44 H 0.150 0.850 45 H 0.150 0.850 46 H 0.096 0.904 47 H 0.119 0.881 48 H 0.259 0.741 49 H 0.164 0.836 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.453 -0.074 -0.360 0.584 hybrid contribution -1.658 -0.490 0.611 1.834 sum -2.111 -0.564 0.251 2.200 Atomic orbital electron populations 1.86674 1.16671 1.80113 1.49216 1.24339 0.83992 1.12138 0.93910 0.94580 0.91388 0.73429 0.81166 1.22841 1.01234 0.93795 0.92055 1.21578 1.03641 0.95704 0.97877 1.21866 1.02730 0.98475 0.97605 1.20266 1.03011 0.87435 0.90765 1.17568 1.00246 0.94176 0.91393 1.21286 0.94367 0.96619 0.94994 1.20260 1.04569 0.94204 0.97784 1.17966 0.79609 0.83720 0.83609 1.90842 1.39433 1.83903 1.24718 1.45600 1.58015 1.08499 1.24351 1.21836 0.94510 0.81321 1.00703 0.87459 1.23621 0.96635 1.01407 0.96478 1.21680 0.97488 0.93910 0.96256 0.88163 1.19676 0.98140 0.95786 0.92943 1.21181 0.97275 0.93297 1.00248 1.21200 0.99629 0.97364 0.94647 1.21170 0.97610 0.98784 0.93947 1.21841 1.05160 0.98013 0.91686 1.96784 1.95096 1.95433 1.09126 1.21030 0.99217 0.95537 0.95000 1.23436 0.98765 0.99060 0.96093 1.18598 0.89242 0.90837 0.87941 1.84752 1.35203 1.90939 1.17789 1.21406 0.99231 0.97335 0.98692 1.21131 0.95512 0.98425 0.91984 1.83920 1.58128 1.37814 1.26491 0.77150 0.84498 1.17155 1.17801 0.82786 0.82777 0.84741 0.76484 0.88484 0.90392 0.85169 0.84923 0.84974 0.85018 0.90378 0.88122 0.74115 0.83603 0.84196 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.03 12.88 -35.23 -0.45 -0.42 16 2 C -0.03 0.04 2.98 36.00 0.11 0.15 16 3 Si 0.70 -1.22 32.11 -169.99 -5.46 -6.67 16 4 C -0.05 0.01 6.20 -35.56 -0.22 -0.21 16 5 C -0.17 0.00 10.78 -39.80 -0.43 -0.43 16 6 C -0.19 0.07 10.26 -39.37 -0.40 -0.33 16 7 C 0.04 0.00 7.03 -36.49 -0.26 -0.25 16 8 C -0.03 0.02 5.87 -105.03 -0.62 -0.60 16 9 C -0.05 0.04 9.20 -38.78 -0.36 -0.32 16 10 C -0.16 -0.11 5.88 -104.89 -0.62 -0.73 16 11 C 0.56 1.05 7.76 -12.46 -0.10 0.95 16 12 O -0.51 -2.69 14.76 -16.66 -0.25 -2.93 16 13 N -0.71 0.68 5.21 -54.05 -0.28 0.40 16 14 C 0.12 -0.15 4.29 -67.12 -0.29 -0.44 16 15 H 0.11 0.02 7.50 -51.93 -0.39 -0.37 16 16 C -0.14 0.24 7.27 -25.77 -0.19 0.05 16 17 C -0.07 0.18 3.87 -90.81 -0.35 -0.17 16 18 H 0.10 -0.32 8.09 -51.93 -0.42 -0.74 16 19 C -0.06 0.06 5.29 -104.63 -0.55 -0.49 16 20 C -0.10 0.12 8.60 -39.58 -0.34 -0.22 16 21 C -0.11 0.10 10.05 -39.59 -0.40 -0.30 16 22 C -0.10 -0.01 9.79 -39.56 -0.39 -0.40 16 23 C -0.09 -0.07 6.22 -39.52 -0.25 -0.32 16 24 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.35 16 25 C -0.09 0.01 9.45 -39.56 -0.37 -0.37 16 26 C -0.14 0.37 7.28 -25.92 -0.19 0.18 16 27 C 0.18 0.13 6.72 -38.62 -0.26 -0.13 16 28 O -0.48 -0.72 11.55 -40.59 -0.47 -1.19 16 29 C -0.15 0.18 9.96 -39.53 -0.39 -0.22 16 30 C -0.05 0.09 9.54 -39.15 -0.37 -0.29 16 31 O -0.17 -0.04 8.80 4.58 0.04 0.00 16 32 H 0.38 -1.05 8.70 45.56 0.40 -0.66 16 33 H 0.14 -0.36 7.96 -51.93 -0.41 -0.77 16 34 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 35 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 36 H 0.15 -0.15 8.06 -52.49 -0.42 -0.58 16 37 H 0.15 -0.38 7.25 -52.49 -0.38 -0.76 16 38 H 0.13 -0.35 6.24 -52.49 -0.33 -0.68 16 39 H 0.40 -1.23 6.73 -40.82 -0.27 -1.51 16 40 H 0.10 -0.21 6.34 -51.93 -0.33 -0.54 16 41 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 42 H 0.13 -0.37 6.68 -52.48 -0.35 -0.72 16 43 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 44 H 0.13 -0.12 8.06 -52.48 -0.42 -0.54 16 45 H 0.13 -0.17 8.05 -52.49 -0.42 -0.59 16 46 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 47 H 0.10 -0.30 7.72 -51.93 -0.40 -0.70 16 48 H 0.40 -0.90 9.06 45.56 0.41 -0.48 16 49 H 0.15 -0.43 8.06 -52.49 -0.42 -0.85 16 50 H 0.14 -0.53 6.96 -52.49 -0.37 -0.89 16 LS Contribution 443.33 15.07 6.68 6.68 Total: 0.00 -9.48 443.33 -14.71 -24.19 By element: Atomic # 1 Polarization: -7.82 SS G_CDS: -5.00 Total: -12.82 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -7.23 Total: -4.88 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: -0.28 Total: 0.40 kcal Atomic # 8 Polarization: -3.41 SS G_CDS: -1.13 Total: -4.54 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.46 Total: -6.67 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 6.68 Total: 6.68 kcal Total: -9.48 -14.71 -24.19 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.681 kcal (2) G-P(sol) polarization free energy of solvation -9.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.709 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.191 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.510 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.76 seconds