Wall clock time and date at job start Sun Mar 7 2021 01:39:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86297 * 109.47271 * 2 1 4 4 C 1.50707 * 109.46795 * 240.00518 * 2 1 3 5 5 C 1.34191 * 126.54360 * 105.02247 * 4 2 1 6 6 N 1.36862 * 109.96734 * 179.97438 * 5 4 2 7 7 C 1.37406 * 109.98156 * 359.97438 * 6 5 4 8 8 C 1.39322 * 133.25204 * 179.97438 * 7 6 5 9 9 C 1.36358 * 120.23438 * 179.76700 * 8 7 6 10 10 C 1.40168 * 120.67131 * 0.52119 * 9 8 7 11 11 C 1.47649 * 119.97337 * 179.75610 * 10 9 8 12 12 O 1.21582 * 119.99902 * 179.72646 * 11 10 9 13 13 N 1.34778 * 120.00016 * 359.71951 * 11 10 9 14 14 C 1.46508 * 119.99567 * 179.97438 * 13 11 10 15 15 H 1.08999 * 112.90775 * 23.75683 * 14 13 11 16 16 C 1.53782 * 113.60939 * 155.00248 * 14 13 11 17 17 C 1.53786 * 87.07870 * 89.11971 * 16 14 13 18 18 H 1.09001 * 113.60933 * 270.79969 * 17 16 14 19 19 C 1.50699 * 113.61389 * 139.98053 * 17 16 14 20 20 C 1.38224 * 119.99661 * 119.99992 * 19 17 16 21 21 C 1.38260 * 120.02069 * 179.97438 * 20 19 17 22 22 C 1.38197 * 120.00789 * 0.28248 * 21 20 19 23 23 C 1.38349 * 119.99163 * 359.46466 * 22 21 20 24 24 Br 1.89097 * 120.00930 * 180.27891 * 23 22 21 25 25 C 1.38242 * 119.99408 * 300.02013 * 19 17 16 26 26 C 1.53775 * 113.61674 * 252.50193 * 14 13 11 27 27 C 1.39190 * 120.04924 * 359.48135 * 10 9 8 28 28 C 1.39234 * 119.39149 * 0.25399 * 27 10 9 29 29 H 0.96706 * 113.99272 * 299.99763 * 1 2 3 30 30 H 1.08998 * 109.47570 * 120.00349 * 2 1 3 31 31 H 1.48507 * 110.00245 * 178.68613 * 3 2 1 32 32 H 1.48506 * 110.00423 * 300.00492 * 3 2 1 33 33 H 1.07999 * 125.01373 * 359.97438 * 5 4 2 34 34 H 0.96999 * 125.00764 * 180.02562 * 6 5 4 35 35 H 1.07998 * 119.88492 * 0.05064 * 8 7 6 36 36 H 1.08004 * 119.66157 * 180.27337 * 9 8 7 37 37 H 0.96995 * 119.99996 * 0.02562 * 13 11 10 38 38 H 1.09001 * 113.61935 * 334.57291 * 16 14 13 39 39 H 1.08998 * 113.69070 * 203.68015 * 16 14 13 40 40 H 1.08000 * 119.98470 * 0.02562 * 20 19 17 41 41 H 1.08002 * 119.99108 * 179.97438 * 21 20 19 42 42 H 1.08004 * 120.00055 * 179.72824 * 22 21 20 43 43 H 1.08001 * 120.00704 * 359.97438 * 25 19 17 44 44 H 1.08998 * 113.61342 * 156.34176 * 26 14 13 45 45 H 1.08996 * 113.61604 * 25.43405 * 26 14 13 46 46 H 1.07996 * 120.29965 * 180.23355 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.4610 -0.1386 -2.3229 6 7 2.8033 -1.1004 -3.2345 7 6 2.4962 -2.3455 -2.7411 8 6 2.6349 -3.6349 -3.2501 9 6 2.2358 -4.7106 -2.5133 10 6 1.6719 -4.5368 -1.2419 11 6 1.2400 -5.7122 -0.4595 12 8 0.7554 -5.5623 0.6454 13 7 1.3829 -6.9512 -0.9703 14 6 0.9549 -8.1175 -0.1937 15 1 0.1950 -7.8766 0.5497 16 6 0.6043 -9.3390 -1.0595 17 6 2.0842 -9.7427 -0.9501 18 1 2.7110 -9.3205 -1.7355 19 6 2.2939 -11.2237 -0.7666 20 6 3.0252 -11.9385 -1.6966 21 6 3.2184 -13.2972 -1.5285 22 6 2.6754 -13.9423 -0.4335 23 6 1.9478 -13.2263 0.5003 24 35 1.2113 -14.1070 2.0028 25 6 1.7545 -11.8673 0.3315 26 6 2.1225 -8.9475 0.3656 27 6 1.5239 -3.2574 -0.7139 28 6 1.9357 -2.1577 -1.4621 29 1 -0.3932 0.4417 0.7652 30 1 1.7924 -0.5139 0.8899 31 1 3.5347 1.7703 0.0320 32 1 1.5615 2.4680 -1.2084 33 1 2.5972 0.9237 -2.4621 34 1 3.2043 -0.9284 -4.1008 35 1 3.0643 -3.7834 -4.2299 36 1 2.3517 -5.7064 -2.9151 37 1 1.7698 -7.0708 -1.8517 38 1 0.2956 -9.0820 -2.0728 39 1 -0.0762 -10.0388 -0.5744 40 1 3.4465 -11.4353 -2.5543 41 1 3.7896 -13.8553 -2.2556 42 1 2.8227 -15.0044 -0.3046 43 1 1.1832 -11.3087 1.0582 44 1 1.8571 -9.5395 1.2414 45 1 3.0394 -8.3743 0.5027 46 1 1.0935 -3.1191 0.2668 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:17 Heat of formation + Delta-G solvation = 54.075682 kcal Electronic energy + Delta-G solvation = -30645.106279 eV Core-core repulsion = 26320.657989 eV Total energy + Delta-G solvation = -4324.448290 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.057 amu Computer time = 2.74 seconds Orbital eigenvalues (eV) -42.52046 -41.62294 -40.39436 -38.93929 -37.79580 -37.37786 -34.63071 -33.40530 -33.31567 -31.97486 -30.82588 -30.43560 -30.21376 -26.80026 -26.53549 -26.41624 -24.77863 -23.54144 -23.49141 -22.49600 -21.67531 -20.60510 -20.19259 -19.12704 -18.55589 -18.30197 -18.00334 -17.42629 -17.06402 -16.58040 -16.23708 -15.93859 -15.84573 -15.59712 -15.42901 -15.16784 -15.03160 -14.87895 -14.79159 -14.66413 -14.52324 -14.36043 -14.11844 -13.83373 -13.57358 -13.50185 -13.45760 -12.95361 -12.71103 -12.57009 -12.44044 -12.03133 -12.01204 -11.95829 -11.87350 -11.56644 -11.31791 -11.18316 -10.85186 -10.81628 -10.20274 -10.06845 -9.86516 -9.63936 -9.35789 -8.86636 -5.03039 -0.07885 0.07296 0.15521 0.22257 0.66929 1.27855 1.39855 1.64622 1.91461 1.93867 1.96880 2.11252 2.52485 2.93308 3.35589 3.51196 3.53170 3.56241 3.62782 3.65337 3.74849 3.80727 3.87987 3.92734 3.97444 4.08424 4.10766 4.20500 4.23525 4.33971 4.35328 4.44813 4.51348 4.55309 4.62786 4.65629 4.74520 4.81562 4.87047 4.89415 4.95706 4.99087 5.06168 5.17617 5.22568 5.29307 5.34149 5.44387 5.48028 5.56287 5.61292 5.76461 5.94219 6.31543 6.53235 6.73410 7.30690 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.039 4.039 3 Si 0.687 3.313 4 C -0.144 4.144 5 C 0.056 3.944 6 N -0.584 5.584 7 C 0.120 3.880 8 C -0.133 4.133 9 C -0.066 4.066 10 C -0.169 4.169 11 C 0.569 3.431 12 O -0.534 6.534 13 N -0.712 5.712 14 C 0.121 3.879 15 H 0.108 0.892 16 C -0.136 4.136 17 C -0.074 4.074 18 H 0.100 0.900 19 C -0.065 4.065 20 C -0.101 4.101 21 C -0.111 4.111 22 C -0.096 4.096 23 C -0.087 4.087 24 Br -0.049 7.049 25 C -0.089 4.089 26 C -0.145 4.145 27 C 0.011 3.989 28 C -0.101 4.101 29 H 0.380 0.620 30 H 0.073 0.927 31 H -0.256 1.256 32 H -0.253 1.253 33 H 0.170 0.830 34 H 0.422 0.578 35 H 0.128 0.872 36 H 0.129 0.871 37 H 0.400 0.600 38 H 0.078 0.922 39 H 0.099 0.901 40 H 0.128 0.872 41 H 0.132 0.868 42 H 0.132 0.868 43 H 0.134 0.866 44 H 0.096 0.904 45 H 0.077 0.923 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.764 2.468 -3.724 5.254 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.150 4.150 3 Si 0.588 3.412 4 C -0.151 4.151 5 C -0.071 4.071 6 N -0.187 5.187 7 C 0.011 3.989 8 C -0.154 4.154 9 C -0.086 4.086 10 C -0.173 4.173 11 C 0.357 3.643 12 O -0.412 6.412 13 N -0.364 5.364 14 C 0.016 3.984 15 H 0.126 0.874 16 C -0.174 4.174 17 C -0.093 4.093 18 H 0.119 0.881 19 C -0.065 4.065 20 C -0.120 4.120 21 C -0.129 4.129 22 C -0.116 4.116 23 C -0.166 4.166 24 Br 0.036 6.964 25 C -0.108 4.108 26 C -0.183 4.183 27 C -0.009 4.009 28 C -0.106 4.106 29 H 0.228 0.772 30 H 0.091 0.909 31 H -0.180 1.180 32 H -0.178 1.178 33 H 0.187 0.813 34 H 0.259 0.741 35 H 0.146 0.854 36 H 0.146 0.854 37 H 0.235 0.765 38 H 0.097 0.903 39 H 0.117 0.883 40 H 0.146 0.854 41 H 0.150 0.850 42 H 0.150 0.850 43 H 0.152 0.848 44 H 0.114 0.886 45 H 0.095 0.905 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.758 2.589 -3.447 5.118 hybrid contribution 0.745 -0.417 -1.525 1.748 sum 3.504 2.172 -4.971 6.458 Atomic orbital electron populations 1.86535 1.17402 1.81820 1.49434 1.24000 0.85464 1.09364 0.96170 0.94973 0.80768 0.77612 0.87841 1.19644 1.07838 0.91336 0.96259 1.21584 1.01905 0.94077 0.89496 1.41689 1.54776 1.04139 1.18048 1.18437 0.99876 0.86482 0.94123 1.19659 1.05844 0.88728 1.01121 1.20578 0.96706 0.98290 0.92998 1.19516 1.08279 0.93204 0.96342 1.18150 0.77700 0.82742 0.85669 1.90797 1.44219 1.85984 1.20158 1.45548 1.64717 1.05189 1.20907 1.21823 0.97494 0.84363 0.94734 0.87411 1.23443 0.95809 0.96849 1.01295 1.21630 0.97740 0.90525 0.99356 0.88148 1.19695 0.97300 0.95265 0.94289 1.21219 0.97749 0.94225 0.98773 1.21201 0.99502 0.94731 0.97510 1.21168 0.96532 1.00325 0.93542 1.21828 1.03608 0.95370 0.95833 1.96787 1.83472 1.78260 1.37839 1.20981 0.99485 0.92348 0.98005 1.23587 0.99875 0.97958 0.96917 1.20676 0.92233 0.89103 0.98850 1.18898 1.04557 0.92744 0.94389 0.77227 0.90948 1.18021 1.17778 0.81314 0.74060 0.85361 0.85372 0.76474 0.90299 0.88251 0.85394 0.84991 0.84980 0.84831 0.88597 0.90457 0.84258 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.65 12.86 -35.23 -0.45 -1.11 16 2 C -0.04 -0.02 3.05 36.01 0.11 0.09 16 3 Si 0.69 -0.97 30.79 -169.99 -5.23 -6.21 16 4 C -0.14 -0.39 5.61 -102.68 -0.58 -0.96 16 5 C 0.06 0.06 10.43 -16.73 -0.17 -0.12 16 6 N -0.58 0.04 6.05 -10.61 -0.06 -0.02 16 7 C 0.12 0.21 7.27 -83.96 -0.61 -0.40 16 8 C -0.13 0.01 10.00 -39.86 -0.40 -0.39 16 9 C -0.07 0.01 9.46 -39.53 -0.37 -0.36 16 10 C -0.17 -0.41 5.87 -104.98 -0.62 -1.02 16 11 C 0.57 1.83 7.76 -12.42 -0.10 1.73 16 12 O -0.53 -3.73 15.93 5.29 0.08 -3.64 16 13 N -0.71 0.11 5.21 -54.02 -0.28 -0.17 16 14 C 0.12 -0.04 4.32 -67.12 -0.29 -0.33 16 15 H 0.11 0.17 7.46 -51.93 -0.39 -0.22 16 16 C -0.14 0.27 7.29 -25.92 -0.19 0.08 16 17 C -0.07 0.15 3.86 -90.96 -0.35 -0.20 16 18 H 0.10 -0.32 8.09 -51.93 -0.42 -0.74 16 19 C -0.06 0.04 5.29 -104.63 -0.55 -0.52 16 20 C -0.10 0.09 9.71 -39.58 -0.38 -0.29 16 21 C -0.11 0.07 10.05 -39.59 -0.40 -0.33 16 22 C -0.10 -0.04 9.79 -39.56 -0.39 -0.43 16 23 C -0.09 -0.10 6.22 -39.52 -0.25 -0.35 16 24 Br -0.05 -0.08 33.70 -68.01 -2.29 -2.37 16 25 C -0.09 -0.03 8.35 -39.56 -0.33 -0.36 16 26 C -0.14 0.13 7.25 -25.92 -0.19 -0.06 16 27 C 0.01 0.04 9.64 -38.86 -0.37 -0.33 16 28 C -0.10 -0.35 6.34 -105.16 -0.67 -1.02 16 29 H 0.38 -1.48 8.74 45.56 0.40 -1.08 16 30 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 31 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 32 H -0.25 -0.25 7.04 56.52 0.40 0.15 16 33 H 0.17 -0.16 6.30 -52.49 -0.33 -0.49 16 34 H 0.42 -1.42 8.96 -40.82 -0.37 -1.78 16 35 H 0.13 -0.34 8.06 -52.49 -0.42 -0.77 16 36 H 0.13 -0.44 6.36 -52.48 -0.33 -0.78 16 37 H 0.40 -1.14 6.70 -40.82 -0.27 -1.41 16 38 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.10 -0.18 7.72 -51.93 -0.40 -0.58 16 40 H 0.13 -0.36 8.05 -52.49 -0.42 -0.78 16 41 H 0.13 -0.34 8.06 -52.49 -0.42 -0.76 16 42 H 0.13 -0.09 8.06 -52.48 -0.42 -0.51 16 43 H 0.13 -0.06 6.66 -52.49 -0.35 -0.41 16 44 H 0.10 -0.09 6.31 -51.93 -0.33 -0.41 16 45 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 46 H 0.14 0.60 7.64 -52.49 -0.40 0.20 16 LS Contribution 403.71 15.07 6.08 6.08 Total: 0.00 -10.14 403.71 -14.60 -24.73 By element: Atomic # 1 Polarization: -6.38 SS G_CDS: -5.34 Total: -11.73 kcal Atomic # 6 Polarization: 1.52 SS G_CDS: -7.10 Total: -5.57 kcal Atomic # 7 Polarization: 0.16 SS G_CDS: -0.35 Total: -0.19 kcal Atomic # 8 Polarization: -4.38 SS G_CDS: -0.37 Total: -4.75 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.23 Total: -6.21 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.29 Total: -2.37 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -10.14 -14.60 -24.73 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.807 kcal (2) G-P(sol) polarization free energy of solvation -10.135 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.672 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.596 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.732 kcal (6) G-S(sol) free energy of system = (1) + (5) 54.076 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.74 seconds