Wall clock time and date at job start Sun Mar 7 2021 01:39:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86297 * 109.47271 * 2 1 4 4 C 1.50707 * 109.46795 * 240.00518 * 2 1 3 5 5 C 1.34191 * 126.54360 * 105.02247 * 4 2 1 6 6 N 1.36862 * 109.96734 * 179.97438 * 5 4 2 7 7 C 1.37406 * 109.98156 * 359.97438 * 6 5 4 8 8 C 1.39322 * 133.25204 * 179.97438 * 7 6 5 9 9 C 1.36358 * 120.23438 * 179.76700 * 8 7 6 10 10 C 1.40168 * 120.67131 * 0.52119 * 9 8 7 11 11 C 1.47649 * 119.97337 * 179.75610 * 10 9 8 12 12 O 1.21582 * 119.99902 * 179.72646 * 11 10 9 13 13 N 1.34778 * 120.00016 * 359.71951 * 11 10 9 14 14 C 1.46508 * 119.99567 * 179.97438 * 13 11 10 15 15 H 1.08999 * 112.90775 * 23.75683 * 14 13 11 16 16 C 1.53782 * 113.60939 * 155.00248 * 14 13 11 17 17 C 1.53786 * 87.07870 * 89.11971 * 16 14 13 18 18 H 1.09001 * 113.60933 * 270.79969 * 17 16 14 19 19 C 1.50699 * 113.61389 * 139.98053 * 17 16 14 20 20 C 1.38224 * 119.99661 * 119.99992 * 19 17 16 21 21 C 1.38260 * 120.02069 * 179.97438 * 20 19 17 22 22 C 1.38197 * 120.00789 * 0.28248 * 21 20 19 23 23 C 1.38349 * 119.99163 * 359.46466 * 22 21 20 24 24 Br 1.89097 * 120.00930 * 180.27891 * 23 22 21 25 25 C 1.38242 * 119.99408 * 300.02013 * 19 17 16 26 26 C 1.53775 * 113.61674 * 252.50193 * 14 13 11 27 27 C 1.39190 * 120.04924 * 359.48135 * 10 9 8 28 28 C 1.39234 * 119.39149 * 0.25399 * 27 10 9 29 29 H 0.96706 * 113.99272 * 299.99763 * 1 2 3 30 30 H 1.08998 * 109.47570 * 120.00349 * 2 1 3 31 31 H 1.48507 * 110.00245 * 178.68613 * 3 2 1 32 32 H 1.48506 * 110.00423 * 300.00492 * 3 2 1 33 33 H 1.07999 * 125.01373 * 359.97438 * 5 4 2 34 34 H 0.96999 * 125.00764 * 180.02562 * 6 5 4 35 35 H 1.07998 * 119.88492 * 0.05064 * 8 7 6 36 36 H 1.08004 * 119.66157 * 180.27337 * 9 8 7 37 37 H 0.96995 * 119.99996 * 0.02562 * 13 11 10 38 38 H 1.09001 * 113.61935 * 334.57291 * 16 14 13 39 39 H 1.08998 * 113.69070 * 203.68015 * 16 14 13 40 40 H 1.08000 * 119.98470 * 0.02562 * 20 19 17 41 41 H 1.08002 * 119.99108 * 179.97438 * 21 20 19 42 42 H 1.08004 * 120.00055 * 179.72824 * 22 21 20 43 43 H 1.08001 * 120.00704 * 359.97438 * 25 19 17 44 44 H 1.08998 * 113.61342 * 156.34176 * 26 14 13 45 45 H 1.08996 * 113.61604 * 25.43405 * 26 14 13 46 46 H 1.07996 * 120.29965 * 180.23355 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.4610 -0.1386 -2.3229 6 7 2.8033 -1.1004 -3.2345 7 6 2.4962 -2.3455 -2.7411 8 6 2.6349 -3.6349 -3.2501 9 6 2.2358 -4.7106 -2.5133 10 6 1.6719 -4.5368 -1.2419 11 6 1.2400 -5.7122 -0.4595 12 8 0.7554 -5.5623 0.6454 13 7 1.3829 -6.9512 -0.9703 14 6 0.9549 -8.1175 -0.1937 15 1 0.1950 -7.8766 0.5497 16 6 0.6043 -9.3390 -1.0595 17 6 2.0842 -9.7427 -0.9501 18 1 2.7110 -9.3205 -1.7355 19 6 2.2939 -11.2237 -0.7666 20 6 3.0252 -11.9385 -1.6966 21 6 3.2184 -13.2972 -1.5285 22 6 2.6754 -13.9423 -0.4335 23 6 1.9478 -13.2263 0.5003 24 35 1.2113 -14.1070 2.0028 25 6 1.7545 -11.8673 0.3315 26 6 2.1225 -8.9475 0.3656 27 6 1.5239 -3.2574 -0.7139 28 6 1.9357 -2.1577 -1.4621 29 1 -0.3932 0.4417 0.7652 30 1 1.7924 -0.5139 0.8899 31 1 3.5347 1.7703 0.0320 32 1 1.5615 2.4680 -1.2084 33 1 2.5972 0.9237 -2.4621 34 1 3.2043 -0.9284 -4.1008 35 1 3.0643 -3.7834 -4.2299 36 1 2.3517 -5.7064 -2.9151 37 1 1.7698 -7.0708 -1.8517 38 1 0.2956 -9.0820 -2.0728 39 1 -0.0762 -10.0388 -0.5744 40 1 3.4465 -11.4353 -2.5543 41 1 3.7896 -13.8553 -2.2556 42 1 2.8227 -15.0044 -0.3046 43 1 1.1832 -11.3087 1.0582 44 1 1.8571 -9.5395 1.2414 45 1 3.0394 -8.3743 0.5027 46 1 1.0935 -3.1191 0.2668 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:16 Heat of formation + Delta-G solvation = 56.248602 kcal Electronic energy + Delta-G solvation = -30645.012054 eV Core-core repulsion = 26320.657989 eV Total energy + Delta-G solvation = -4324.354065 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.057 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -42.57209 -41.63319 -40.48274 -38.94389 -37.86657 -37.45517 -34.74668 -33.45996 -33.31353 -31.95778 -30.88756 -30.48465 -30.21548 -26.71821 -26.53575 -26.43803 -24.85146 -23.57432 -23.45610 -22.46353 -21.78830 -20.67773 -20.16814 -19.17516 -18.61595 -18.33540 -17.97922 -17.43231 -17.14092 -16.55974 -16.25167 -16.02417 -15.88678 -15.65900 -15.46469 -15.16685 -15.05927 -14.92956 -14.84533 -14.69027 -14.49407 -14.31387 -14.14126 -13.84855 -13.58252 -13.50684 -13.43954 -12.92205 -12.76078 -12.64376 -12.35755 -12.08109 -12.01767 -11.92617 -11.88737 -11.54348 -11.32442 -11.19161 -11.12382 -10.89987 -10.20678 -10.17512 -9.83183 -9.61229 -9.43632 -8.92872 -4.93143 -0.22985 0.10590 0.11726 0.27704 0.64342 1.32887 1.34289 1.70668 1.78757 1.93775 1.96731 2.03203 2.58450 2.81576 3.42880 3.48539 3.58724 3.62516 3.66324 3.67479 3.74466 3.84741 3.95040 3.98974 4.06364 4.08389 4.18887 4.23855 4.29903 4.33439 4.41853 4.45047 4.48891 4.58303 4.69256 4.72830 4.75048 4.84235 4.93493 4.95437 4.98497 5.01154 5.12489 5.18932 5.22975 5.27081 5.36232 5.38674 5.46733 5.50424 5.62205 5.85757 5.87629 6.42460 6.48521 6.94384 7.16298 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.059 4.059 3 Si 0.789 3.211 4 C -0.180 4.180 5 C 0.057 3.943 6 N -0.573 5.573 7 C 0.110 3.890 8 C -0.126 4.126 9 C -0.061 4.061 10 C -0.176 4.176 11 C 0.565 3.435 12 O -0.584 6.584 13 N -0.692 5.692 14 C 0.114 3.886 15 H 0.082 0.918 16 C -0.125 4.125 17 C -0.061 4.061 18 H 0.123 0.877 19 C -0.068 4.068 20 C -0.101 4.101 21 C -0.114 4.114 22 C -0.108 4.108 23 C -0.103 4.103 24 Br -0.064 7.064 25 C -0.099 4.099 26 C -0.145 4.145 27 C -0.016 4.016 28 C -0.130 4.130 29 H 0.399 0.601 30 H 0.070 0.930 31 H -0.287 1.287 32 H -0.281 1.281 33 H 0.187 0.813 34 H 0.438 0.562 35 H 0.164 0.836 36 H 0.167 0.833 37 H 0.416 0.584 38 H 0.093 0.907 39 H 0.096 0.904 40 H 0.153 0.847 41 H 0.152 0.848 42 H 0.136 0.864 43 H 0.133 0.867 44 H 0.091 0.909 45 H 0.070 0.930 46 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.081 2.395 -6.620 8.138 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.379 6.379 2 C -0.168 4.168 3 Si 0.692 3.308 4 C -0.187 4.187 5 C -0.070 4.070 6 N -0.177 5.177 7 C 0.001 3.999 8 C -0.146 4.146 9 C -0.081 4.081 10 C -0.181 4.181 11 C 0.354 3.646 12 O -0.465 6.465 13 N -0.344 5.344 14 C 0.008 3.992 15 H 0.101 0.899 16 C -0.162 4.162 17 C -0.079 4.079 18 H 0.141 0.859 19 C -0.069 4.069 20 C -0.119 4.119 21 C -0.133 4.133 22 C -0.128 4.128 23 C -0.182 4.182 24 Br 0.022 6.978 25 C -0.119 4.119 26 C -0.183 4.183 27 C -0.036 4.036 28 C -0.135 4.135 29 H 0.249 0.751 30 H 0.088 0.912 31 H -0.214 1.214 32 H -0.207 1.207 33 H 0.204 0.796 34 H 0.279 0.721 35 H 0.181 0.819 36 H 0.184 0.816 37 H 0.255 0.745 38 H 0.112 0.888 39 H 0.115 0.885 40 H 0.171 0.829 41 H 0.170 0.830 42 H 0.154 0.846 43 H 0.151 0.849 44 H 0.110 0.890 45 H 0.089 0.911 46 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 4.076 2.475 -6.373 7.959 hybrid contribution 0.342 -0.430 -0.643 0.845 sum 4.417 2.045 -7.016 8.539 Atomic orbital electron populations 1.86478 1.18003 1.82542 1.50866 1.24416 0.85241 1.11539 0.95610 0.93754 0.77300 0.74037 0.85731 1.20112 1.09232 0.91603 0.97800 1.21873 1.00978 0.94989 0.89178 1.41684 1.54148 1.03350 1.18497 1.18736 0.99775 0.87764 0.93669 1.20085 1.04619 0.87624 1.02264 1.20940 0.95350 1.00253 0.91515 1.19583 1.08805 0.92158 0.97531 1.18392 0.77153 0.83878 0.85135 1.90769 1.46687 1.86729 1.22362 1.45376 1.63555 1.04126 1.21351 1.21849 0.97450 0.84773 0.95087 0.89947 1.23374 0.96010 0.95326 1.01534 1.21631 0.97860 0.89567 0.98892 0.85857 1.19847 0.97156 0.95874 0.94016 1.21548 0.96986 0.94189 0.99191 1.21493 0.99217 0.95194 0.97364 1.21354 0.96760 1.00768 0.93937 1.21935 1.04582 0.95818 0.95898 1.96759 1.83764 1.78550 1.38761 1.21090 0.99911 0.92215 0.98666 1.23559 0.99077 0.97936 0.97764 1.20617 0.93971 0.90437 0.98528 1.19165 1.05522 0.93146 0.95619 0.75083 0.91198 1.21351 1.20723 0.79594 0.72119 0.81866 0.81573 0.74497 0.88798 0.88512 0.82886 0.82999 0.84562 0.84910 0.89040 0.91139 0.86669 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -2.48 12.86 -148.98 -1.92 -4.39 16 2 C -0.06 -0.18 3.05 71.24 0.22 0.03 16 3 Si 0.79 -1.93 30.79 68.60 2.11 0.18 16 4 C -0.18 -1.27 5.61 -18.61 -0.10 -1.38 16 5 C 0.06 0.14 10.43 82.98 0.87 1.00 16 6 N -0.57 0.42 6.05 -187.49 -1.13 -0.72 16 7 C 0.11 0.35 7.27 39.18 0.28 0.64 16 8 C -0.13 0.26 10.00 22.09 0.22 0.48 16 9 C -0.06 0.11 9.46 22.30 0.21 0.32 16 10 C -0.18 -1.06 5.87 -20.09 -0.12 -1.17 16 11 C 0.56 4.54 7.76 86.73 0.67 5.21 16 12 O -0.58 -10.14 15.93 -3.97 -0.06 -10.21 16 13 N -0.69 0.33 5.21 -443.08 -2.31 -1.98 16 14 C 0.11 0.00 4.32 45.51 0.20 0.19 16 15 H 0.08 0.45 7.46 -2.39 -0.02 0.44 16 16 C -0.12 0.61 7.29 31.12 0.23 0.83 16 17 C -0.06 0.34 3.86 -11.01 -0.04 0.30 16 18 H 0.12 -1.20 8.09 -2.39 -0.02 -1.22 16 19 C -0.07 0.16 5.29 -19.87 -0.11 0.05 16 20 C -0.10 0.40 9.71 22.27 0.22 0.62 16 21 C -0.11 0.31 10.05 22.27 0.22 0.53 16 22 C -0.11 -0.07 9.79 22.29 0.22 0.15 16 23 C -0.10 -0.29 6.22 22.31 0.14 -0.15 16 24 Br -0.06 -0.27 33.70 -20.37 -0.69 -0.96 16 25 C -0.10 -0.09 8.35 22.29 0.19 0.09 16 26 C -0.14 0.21 7.25 31.12 0.23 0.44 16 27 C -0.02 -0.17 9.64 22.74 0.22 0.05 16 28 C -0.13 -1.15 6.34 -20.21 -0.13 -1.28 16 29 H 0.40 -2.50 8.74 -74.05 -0.65 -3.15 16 30 H 0.07 0.16 7.96 -2.39 -0.02 0.14 16 31 H -0.29 -0.73 7.11 99.48 0.71 -0.02 16 32 H -0.28 -0.56 7.04 99.48 0.70 0.14 16 33 H 0.19 -0.38 6.30 -2.91 -0.02 -0.40 16 34 H 0.44 -3.57 8.96 -92.71 -0.83 -4.41 16 35 H 0.16 -1.50 8.06 -2.91 -0.02 -1.53 16 36 H 0.17 -1.72 6.36 -2.91 -0.02 -1.74 16 37 H 0.42 -3.23 6.70 -92.71 -0.62 -3.85 16 38 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 39 H 0.10 -0.37 7.72 -2.39 -0.02 -0.39 16 40 H 0.15 -1.41 8.05 -2.91 -0.02 -1.43 16 41 H 0.15 -1.10 8.06 -2.91 -0.02 -1.12 16 42 H 0.14 -0.15 8.06 -2.91 -0.02 -0.17 16 43 H 0.13 0.03 6.66 -2.91 -0.02 0.01 16 44 H 0.09 -0.05 6.31 -2.39 -0.02 -0.06 16 45 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 46 H 0.12 1.59 7.64 -2.91 -0.02 1.57 16 Total: 0.00 -27.85 403.71 -1.16 -29.01 By element: Atomic # 1 Polarization: -16.93 SS G_CDS: -0.99 Total: -17.92 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: 3.83 Total: 6.97 kcal Atomic # 7 Polarization: 0.75 SS G_CDS: -3.44 Total: -2.69 kcal Atomic # 8 Polarization: -12.62 SS G_CDS: -1.98 Total: -14.60 kcal Atomic # 14 Polarization: -1.93 SS G_CDS: 2.11 Total: 0.18 kcal Atomic # 35 Polarization: -0.27 SS G_CDS: -0.69 Total: -0.96 kcal Total: -27.85 -1.16 -29.01 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.259 kcal (2) G-P(sol) polarization free energy of solvation -27.847 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.412 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.163 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.010 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds