Wall clock time and date at job start Sun Mar 7 2021 01:39:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86301 * 109.46839 * 2 1 4 4 C 1.50698 * 109.46909 * 119.99861 * 2 1 3 5 5 C 1.38554 * 120.32587 * 244.99581 * 4 2 1 6 6 N 1.31523 * 120.90390 * 179.97438 * 5 4 2 7 7 C 1.32718 * 121.64307 * 0.02562 * 6 5 4 8 8 C 1.48165 * 119.71923 * 179.97438 * 7 6 5 9 9 O 1.21521 * 119.99645 * 179.97438 * 8 7 6 10 10 N 1.34776 * 120.00341 * 359.97438 * 8 7 6 11 11 C 1.46498 * 119.99896 * 180.02562 * 10 8 7 12 12 H 1.09006 * 112.85119 * 336.19757 * 11 10 8 13 13 C 1.53959 * 113.61488 * 107.46654 * 11 10 8 14 14 C 1.53784 * 87.01775 * 89.19986 * 13 11 10 15 15 H 1.09002 * 113.61172 * 270.77435 * 14 13 11 16 16 C 1.50695 * 113.61605 * 139.95445 * 14 13 11 17 17 C 1.38220 * 119.99336 * 321.14002 * 16 14 13 18 18 C 1.38264 * 120.02013 * 180.27962 * 17 16 14 19 19 C 1.38202 * 120.00926 * 359.43987 * 18 17 16 20 20 C 1.38345 * 119.98814 * 0.28217 * 19 18 17 21 21 Br 1.89099 * 120.01241 * 179.97438 * 20 19 18 22 22 C 1.38236 * 119.99792 * 140.86397 * 16 14 13 23 23 C 1.53779 * 113.61312 * 205.00161 * 11 10 8 24 24 C 1.39305 * 120.55372 * 0.25192 * 7 6 5 25 25 C 1.38596 * 119.05751 * 359.49865 * 24 7 6 26 26 H 0.96704 * 114.00201 * 299.99871 * 1 2 3 27 27 H 1.09001 * 109.46810 * 240.00013 * 2 1 3 28 28 H 1.48493 * 110.00054 * 299.99719 * 3 2 1 29 29 H 1.48502 * 109.99950 * 61.32036 * 3 2 1 30 30 H 1.08005 * 119.54507 * 359.96424 * 5 4 2 31 31 H 0.96999 * 119.99946 * 0.02562 * 10 8 7 32 32 H 1.08993 * 113.66437 * 334.67575 * 13 11 10 33 33 H 1.08998 * 113.61580 * 203.71605 * 13 11 10 34 34 H 1.07997 * 119.99201 * 359.97438 * 17 16 14 35 35 H 1.08002 * 119.99912 * 179.72620 * 18 17 16 36 36 H 1.08000 * 120.00653 * 180.30239 * 19 18 17 37 37 H 1.08002 * 120.00457 * 359.97438 * 22 16 14 38 38 H 1.09005 * 113.61367 * 156.25220 * 23 11 10 39 39 H 1.09001 * 113.61771 * 25.34948 * 23 11 10 40 40 H 1.08002 * 120.47149 * 179.72426 * 24 7 6 41 41 H 1.07998 * 120.75247 * 180.23580 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6411 -0.0172 2.1977 6 7 3.0843 -0.6257 3.2762 7 6 2.8727 -1.9196 3.4822 8 6 3.3918 -2.5621 4.7123 9 8 3.2006 -3.7464 4.9063 10 7 4.0761 -1.8331 5.6160 11 6 4.5898 -2.4686 6.8319 12 1 4.0392 -3.3691 7.1040 13 6 6.1181 -2.6550 6.8319 14 6 6.2083 -1.2555 7.4629 15 1 6.2701 -0.4499 6.7312 16 6 7.2534 -1.1465 8.5430 17 6 7.4452 -2.1917 9.4269 18 6 8.4000 -2.0900 10.4218 19 6 9.1709 -0.9477 10.5257 20 6 8.9833 0.0964 9.6377 21 35 10.0373 1.6599 9.7796 22 6 8.0240 -0.0035 8.6463 23 6 4.7873 -1.4903 8.0019 24 6 2.1716 -2.6800 2.5490 25 6 1.6881 -2.0639 1.4055 26 1 -0.3934 0.4417 0.7651 27 1 1.7923 -0.5138 -0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5878 2.4586 1.2243 30 1 2.8332 1.0371 2.0641 31 1 4.2284 -0.8877 5.4614 32 1 6.5518 -2.7126 5.8336 33 1 6.4606 -3.4535 7.4900 34 1 6.8457 -3.0862 9.3435 35 1 8.5465 -2.9051 11.1150 36 1 9.9201 -0.8703 11.2998 37 1 7.8775 0.8112 7.9526 38 1 4.7653 -1.9699 8.9805 39 1 4.1482 -0.6090 7.9469 40 1 2.0040 -3.7338 2.7159 41 1 1.1377 -2.6263 0.6658 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:23 Heat of formation + Delta-G solvation = 30.185610 kcal Electronic energy + Delta-G solvation = -25879.085558 eV Core-core repulsion = 21965.591217 eV Total energy + Delta-G solvation = -3913.494341 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.041 amu Computer time = 2.59 seconds Orbital eigenvalues (eV) -42.02903 -41.38528 -40.15744 -38.85584 -38.07233 -34.86195 -33.78943 -33.15575 -32.99657 -32.02013 -30.13329 -28.07853 -26.83994 -26.27390 -25.11026 -24.08621 -23.56940 -22.61275 -21.96337 -20.14714 -19.35800 -18.79238 -18.11035 -17.81171 -17.02531 -16.75664 -16.56438 -16.42010 -16.35075 -16.11387 -16.01260 -15.35146 -15.18181 -14.84218 -14.61631 -14.46848 -14.43418 -14.41336 -14.22101 -13.60474 -13.55115 -13.45609 -12.97649 -12.74885 -12.40867 -12.17667 -12.05213 -12.01452 -11.59006 -11.43668 -11.32184 -11.16831 -11.14034 -10.81969 -10.69023 -10.40387 -10.10047 -9.89343 -9.63499 -5.13359 -0.62491 0.00847 0.05986 0.22832 0.66073 1.05411 1.41431 1.57283 1.80859 1.90982 2.51732 2.63981 2.88161 3.13905 3.32569 3.37780 3.50514 3.55065 3.61309 3.67865 3.76905 3.84660 3.86302 3.98835 4.01730 4.08169 4.20614 4.30500 4.34718 4.48719 4.52674 4.58260 4.61360 4.69389 4.81643 4.83808 4.88399 4.90648 4.91929 5.02462 5.17056 5.29101 5.30417 5.41321 5.53886 5.75997 6.17030 6.27602 6.57677 7.08754 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.074 4.074 3 Si 0.686 3.314 4 C -0.148 4.148 5 C 0.102 3.898 6 N -0.453 5.453 7 C 0.081 3.919 8 C 0.576 3.424 9 O -0.526 6.526 10 N -0.694 5.694 11 C 0.117 3.883 12 H 0.108 0.892 13 C -0.142 4.142 14 C -0.074 4.074 15 H 0.101 0.899 16 C -0.064 4.064 17 C -0.102 4.102 18 C -0.110 4.110 19 C -0.096 4.096 20 C -0.088 4.088 21 Br -0.050 7.050 22 C -0.087 4.087 23 C -0.135 4.135 24 C -0.107 4.107 25 C -0.052 4.052 26 H 0.378 0.622 27 H 0.125 0.875 28 H -0.251 1.251 29 H -0.255 1.255 30 H 0.165 0.835 31 H 0.413 0.587 32 H 0.077 0.923 33 H 0.097 0.903 34 H 0.130 0.870 35 H 0.133 0.867 36 H 0.132 0.868 37 H 0.132 0.868 38 H 0.100 0.900 39 H 0.079 0.921 40 H 0.153 0.847 41 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.659 1.029 -0.754 1.436 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.184 4.184 3 Si 0.587 3.413 4 C -0.150 4.150 5 C -0.058 4.058 6 N -0.164 5.164 7 C -0.058 4.058 8 C 0.361 3.639 9 O -0.401 6.401 10 N -0.345 5.345 11 C 0.012 3.988 12 H 0.126 0.874 13 C -0.181 4.181 14 C -0.093 4.093 15 H 0.119 0.881 16 C -0.065 4.065 17 C -0.120 4.120 18 C -0.129 4.129 19 C -0.115 4.115 20 C -0.167 4.167 21 Br 0.035 6.965 22 C -0.107 4.107 23 C -0.173 4.173 24 C -0.128 4.128 25 C -0.078 4.078 26 H 0.226 0.774 27 H 0.143 0.857 28 H -0.176 1.176 29 H -0.179 1.179 30 H 0.181 0.819 31 H 0.249 0.751 32 H 0.096 0.904 33 H 0.115 0.885 34 H 0.148 0.852 35 H 0.151 0.849 36 H 0.150 0.850 37 H 0.150 0.850 38 H 0.119 0.881 39 H 0.098 0.902 40 H 0.171 0.829 41 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 1.271 1.739 -0.441 2.199 hybrid contribution -1.572 -0.448 -0.201 1.647 sum -0.301 1.291 -0.641 1.473 Atomic orbital electron populations 1.86645 1.17169 1.79971 1.49390 1.25021 0.84294 1.11360 0.97753 0.94976 0.91411 0.73982 0.80967 1.21587 0.99503 0.95760 0.98157 1.22678 0.94175 1.00047 0.88858 1.67525 1.18189 1.09433 1.21269 1.21143 0.98603 0.90296 0.95716 1.17844 0.77866 0.85933 0.82265 1.90824 1.57929 1.14771 1.76609 1.45488 1.54948 1.13785 1.20247 1.21949 0.94961 0.97514 0.84402 0.87371 1.23602 0.95870 0.96474 1.02147 1.21630 0.92957 0.98961 0.95712 0.88069 1.19688 0.96623 0.93558 0.96674 1.21176 0.97865 0.98569 0.94415 1.21200 0.95618 0.97611 0.98437 1.21171 0.99647 0.92514 0.98202 1.21842 0.99846 0.94338 1.00678 1.96781 1.68540 1.33001 1.98137 1.21034 0.94306 0.98225 0.97156 1.23433 0.95491 0.99992 0.98353 1.22233 0.95308 1.02327 0.92948 1.21574 0.95746 0.93739 0.96757 0.77421 0.85704 1.17567 1.17936 0.81864 0.75077 0.90431 0.88451 0.85174 0.84928 0.84979 0.85024 0.88137 0.90188 0.82932 0.83432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 37. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.35 12.84 -35.23 -0.45 -0.10 16 2 C -0.07 0.17 2.82 36.00 0.10 0.27 16 3 Si 0.69 -1.98 29.91 -169.99 -5.08 -7.06 16 4 C -0.15 0.23 5.36 -104.36 -0.56 -0.33 16 5 C 0.10 -0.13 9.84 -17.57 -0.17 -0.30 16 6 N -0.45 -0.16 9.54 -9.80 -0.09 -0.25 16 7 C 0.08 0.10 6.75 -83.01 -0.56 -0.46 16 8 C 0.58 1.29 7.81 -12.18 -0.10 1.20 16 9 O -0.53 -2.71 15.92 5.35 0.09 -2.63 16 10 N -0.69 0.12 5.25 -53.77 -0.28 -0.16 16 11 C 0.12 -0.11 4.33 -67.03 -0.29 -0.40 16 12 H 0.11 0.03 7.46 -51.93 -0.39 -0.36 16 13 C -0.14 0.23 7.27 -25.82 -0.19 0.04 16 14 C -0.07 0.15 3.85 -90.96 -0.35 -0.20 16 15 H 0.10 -0.26 8.09 -51.93 -0.42 -0.68 16 16 C -0.06 0.05 5.29 -104.63 -0.55 -0.50 16 17 C -0.10 0.11 8.55 -39.58 -0.34 -0.22 16 18 C -0.11 0.09 10.05 -39.59 -0.40 -0.31 16 19 C -0.10 -0.02 9.79 -39.56 -0.39 -0.41 16 20 C -0.09 -0.09 6.22 -39.52 -0.25 -0.33 16 21 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.36 16 22 C -0.09 -0.02 9.45 -39.56 -0.37 -0.39 16 23 C -0.13 0.32 7.29 -25.92 -0.19 0.13 16 24 C -0.11 -0.04 9.63 -39.05 -0.38 -0.41 16 25 C -0.05 0.05 9.83 -39.31 -0.39 -0.33 16 26 H 0.38 -1.28 8.70 45.56 0.40 -0.89 16 27 H 0.13 -0.40 7.96 -51.93 -0.41 -0.81 16 28 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 29 H -0.25 0.30 7.01 56.52 0.40 0.69 16 30 H 0.16 -0.55 4.86 -52.48 -0.25 -0.80 16 31 H 0.41 -0.61 8.03 -40.82 -0.33 -0.94 16 32 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.10 -0.21 6.38 -51.93 -0.33 -0.55 16 34 H 0.13 -0.37 6.72 -52.49 -0.35 -0.72 16 35 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 36 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 37 H 0.13 -0.11 8.05 -52.49 -0.42 -0.53 16 38 H 0.10 -0.28 7.66 -51.93 -0.40 -0.68 16 39 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 40 H 0.15 0.01 7.64 -52.49 -0.40 -0.39 16 41 H 0.15 -0.35 8.06 -52.49 -0.42 -0.77 16 LS Contribution 367.44 15.07 5.54 5.54 Total: 0.00 -6.99 367.44 -12.57 -19.57 By element: Atomic # 1 Polarization: -4.95 SS G_CDS: -4.63 Total: -9.57 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -5.36 Total: -2.97 kcal Atomic # 7 Polarization: -0.03 SS G_CDS: -0.38 Total: -0.41 kcal Atomic # 8 Polarization: -2.36 SS G_CDS: -0.37 Total: -2.73 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: -5.08 Total: -7.06 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -6.99 -12.57 -19.57 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.751 kcal (2) G-P(sol) polarization free energy of solvation -6.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.760 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.566 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.60 seconds