Wall clock time and date at job start Sun Mar 7 2021 01:39:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34659 * 124.85242 * 2 1 4 4 C 1.36769 * 108.39594 * 180.19332 * 3 2 1 5 5 C 1.47271 * 126.94137 * 179.84037 * 4 3 2 6 6 O 1.21619 * 120.00103 * 179.68525 * 5 4 3 7 7 N 1.34780 * 119.99758 * 359.68878 * 5 4 3 8 8 C 1.46497 * 119.99653 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.84935 * 334.66222 * 8 7 5 10 10 C 1.53786 * 113.61643 * 105.85894 * 8 7 5 11 11 C 1.53962 * 87.01719 * 89.22773 * 10 8 7 12 12 H 1.08997 * 113.53543 * 270.80998 * 11 10 8 13 13 C 1.50701 * 113.74004 * 139.94532 * 11 10 8 14 14 C 1.38199 * 119.99240 * 142.40330 * 13 11 10 15 15 C 1.38347 * 119.98608 * 179.97438 * 14 13 11 16 16 Br 1.89099 * 120.00794 * 179.97438 * 15 14 13 17 17 C 1.38298 * 119.98360 * 0.02562 * 15 14 13 18 18 C 1.38241 * 119.98813 * 359.97438 * 17 15 14 19 19 C 1.38226 * 120.01105 * 359.72568 * 18 17 15 20 20 C 1.53781 * 113.61305 * 203.46742 * 8 7 5 21 21 C 1.46684 * 106.11558 * 359.57813 * 4 3 2 22 22 C 1.34484 * 106.33312 * 0.26101 * 21 4 3 23 23 C 1.50698 * 125.57061 * 180.02562 * 22 21 4 24 24 O 1.42906 * 109.47036 * 149.97400 * 23 22 21 25 25 Si 1.86294 * 109.47216 * 29.97958 * 23 22 21 26 26 H 1.08995 * 109.47320 * 270.28513 * 1 2 3 27 27 H 1.09007 * 109.46888 * 30.28753 * 1 2 3 28 28 H 1.09002 * 109.46800 * 150.27947 * 1 2 3 29 29 H 1.08004 * 125.79830 * 0.05798 * 3 2 1 30 30 H 0.96995 * 120.00200 * 359.97438 * 7 5 4 31 31 H 1.08993 * 113.61491 * 203.74894 * 10 8 7 32 32 H 1.09000 * 113.61138 * 334.65232 * 10 8 7 33 33 H 1.08002 * 120.00319 * 0.02562 * 14 13 11 34 34 H 1.08000 * 120.00859 * 180.02562 * 17 15 14 35 35 H 1.08000 * 119.99692 * 180.02562 * 18 17 15 36 36 H 1.07991 * 119.99035 * 180.27882 * 19 18 17 37 37 H 1.09001 * 113.61695 * 25.34675 * 20 8 7 38 38 H 1.08996 * 113.61580 * 156.16953 * 20 8 7 39 39 H 1.07998 * 126.83143 * 180.22848 * 21 4 3 40 40 H 1.08998 * 109.47587 * 269.97185 * 23 22 21 41 41 H 0.96696 * 114.00458 * 300.00587 * 24 23 22 42 42 H 1.48500 * 110.00350 * 179.97438 * 25 23 22 43 43 H 1.48506 * 110.00078 * 301.31840 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5462 0.7176 -0.0044 5 6 4.7285 1.5957 -0.0092 6 8 5.8447 1.1128 -0.0071 7 7 4.5734 2.9346 -0.0160 8 6 5.7495 3.8080 -0.0214 9 1 6.6309 3.3338 0.4102 10 6 6.0135 4.4775 -1.3805 11 6 5.1017 5.6225 -0.9030 12 1 4.0492 5.4690 -1.1414 13 6 5.5955 6.9928 -1.2895 14 6 4.6945 7.9721 -1.6624 15 6 5.1480 9.2302 -2.0167 16 35 3.9157 10.5704 -2.5277 17 6 6.5028 9.5071 -1.9981 18 6 7.4033 8.5269 -1.6249 19 6 6.9494 7.2718 -1.2650 20 6 5.4738 5.2158 0.5327 21 6 3.5375 -0.7492 0.0032 22 6 2.2447 -1.1197 0.0055 23 6 1.7398 -2.5396 0.0135 24 8 0.4812 -2.5937 0.6883 25 14 2.9653 -3.6295 0.8971 26 1 -0.3634 0.0051 1.0276 27 1 -0.3633 0.8875 -0.5183 28 1 -0.3633 -0.8925 -0.5095 29 1 1.8767 2.1241 0.0009 30 1 3.6832 3.3197 -0.0181 31 1 7.0513 4.7773 -1.5253 32 1 5.6105 3.9212 -2.2268 33 1 3.6365 7.7555 -1.6764 34 1 6.8572 10.4892 -2.2742 35 1 8.4614 8.7431 -1.6100 36 1 7.6529 6.5077 -0.9693 37 1 4.6358 5.2548 1.2286 38 1 6.3636 5.7173 0.9131 39 1 4.3981 -1.4017 0.0058 40 1 1.6173 -2.8875 -1.0121 41 1 0.5150 -2.2977 1.6082 42 1 2.4787 -5.0325 0.9124 43 1 4.2870 -3.5573 0.2239 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:28 Heat of formation + Delta-G solvation = 40.966538 kcal Electronic energy + Delta-G solvation = -26652.403559 eV Core-core repulsion = 22712.065236 eV Total energy + Delta-G solvation = -3940.338323 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 2.21 seconds Orbital eigenvalues (eV) -42.51242 -41.50322 -40.06195 -38.65041 -37.83245 -34.57049 -33.82038 -33.16720 -32.20593 -31.25067 -30.11676 -27.83413 -26.79802 -26.61515 -25.94066 -23.93418 -23.53295 -22.43298 -21.05934 -20.67220 -20.04428 -19.10189 -18.14756 -17.44061 -17.11486 -16.88514 -16.82579 -16.43249 -16.19811 -15.79709 -15.55042 -15.40428 -15.14856 -15.05392 -14.77924 -14.56391 -14.50308 -14.28948 -14.06840 -13.59062 -13.53146 -13.48141 -13.35022 -13.18329 -12.95004 -12.39384 -12.27439 -12.01296 -11.99226 -11.97044 -11.57316 -11.37557 -11.15833 -10.82752 -10.79675 -10.01725 -9.89556 -9.64355 -9.59197 -9.24339 -5.02263 0.05986 0.22559 0.65052 0.73593 1.03160 1.38508 1.63101 1.83098 2.01376 2.23586 2.51722 2.65640 3.16578 3.36803 3.49567 3.53563 3.64302 3.72114 3.74982 3.78458 3.87948 3.99592 4.02306 4.10387 4.18297 4.20509 4.34079 4.34942 4.42311 4.49827 4.57873 4.60165 4.65626 4.76274 4.84246 4.89039 4.91648 4.96565 4.97271 5.10272 5.17037 5.29845 5.45544 5.60738 5.69366 5.75966 5.93537 6.10799 6.32001 6.63243 7.44624 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.424 5.424 3 C 0.051 3.949 4 C -0.226 4.226 5 C 0.594 3.406 6 O -0.539 6.539 7 N -0.715 5.715 8 C 0.124 3.876 9 H 0.106 0.894 10 C -0.144 4.144 11 C -0.074 4.074 12 H 0.098 0.902 13 C -0.064 4.064 14 C -0.088 4.088 15 C -0.088 4.088 16 Br -0.051 7.051 17 C -0.096 4.096 18 C -0.110 4.110 19 C -0.102 4.102 20 C -0.135 4.135 21 C -0.136 4.136 22 C -0.019 4.019 23 C -0.043 4.043 24 O -0.544 6.544 25 Si 0.715 3.285 26 H 0.078 0.922 27 H 0.081 0.919 28 H 0.099 0.901 29 H 0.170 0.830 30 H 0.397 0.603 31 H 0.095 0.905 32 H 0.076 0.924 33 H 0.131 0.869 34 H 0.132 0.868 35 H 0.133 0.867 36 H 0.131 0.869 37 H 0.078 0.922 38 H 0.099 0.901 39 H 0.152 0.848 40 H 0.117 0.883 41 H 0.380 0.620 42 H -0.252 1.252 43 H -0.251 1.251 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.675 1.193 3.025 4.907 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.099 5.099 3 C -0.085 4.085 4 C -0.237 4.237 5 C 0.383 3.617 6 O -0.416 6.416 7 N -0.366 5.366 8 C 0.018 3.982 9 H 0.124 0.876 10 C -0.183 4.183 11 C -0.092 4.092 12 H 0.116 0.884 13 C -0.065 4.065 14 C -0.108 4.108 15 C -0.167 4.167 16 Br 0.035 6.965 17 C -0.116 4.116 18 C -0.128 4.128 19 C -0.120 4.120 20 C -0.173 4.173 21 C -0.160 4.160 22 C -0.128 4.128 23 C -0.153 4.153 24 O -0.350 6.350 25 Si 0.614 3.386 26 H 0.096 0.904 27 H 0.099 0.901 28 H 0.118 0.882 29 H 0.187 0.813 30 H 0.231 0.769 31 H 0.114 0.886 32 H 0.094 0.906 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.151 0.849 36 H 0.149 0.851 37 H 0.096 0.904 38 H 0.117 0.883 39 H 0.170 0.830 40 H 0.135 0.865 41 H 0.227 0.773 42 H -0.177 1.177 43 H -0.175 1.175 Dipole moment (debyes) X Y Z Total from point charges -3.366 0.383 2.192 4.035 hybrid contribution -0.539 0.572 -0.595 0.985 sum -3.905 0.955 1.597 4.326 Atomic orbital electron populations 1.22270 0.76169 1.05083 1.04001 1.43480 1.07029 1.04908 1.54477 1.21908 0.90092 0.91774 1.04760 1.20275 0.91440 0.93910 1.18061 1.17389 0.88105 0.81127 0.75056 1.90790 1.25849 1.75092 1.49901 1.45496 1.08921 1.05598 1.76610 1.21785 0.89872 0.89819 0.96742 0.87583 1.23612 1.00497 0.95949 0.98222 1.21646 1.00122 0.90570 0.96897 0.88356 1.19703 0.93206 0.94950 0.98654 1.21014 1.00198 0.91187 0.98425 1.21834 0.94018 0.94382 1.06477 1.96778 1.58318 1.50659 1.90773 1.21168 0.91172 1.00278 0.98939 1.21206 0.99969 0.92946 0.98715 1.21190 0.95224 0.96984 0.98584 1.23424 1.03120 0.95043 0.95685 1.21732 0.94985 0.93237 1.06082 1.20809 0.90569 0.89094 1.12331 1.24823 0.93620 0.94783 1.02118 1.86476 1.29804 1.89290 1.29381 0.94082 0.76825 0.77762 0.89905 0.90356 0.90068 0.88230 0.81258 0.76861 0.88646 0.90555 0.85130 0.84981 0.84913 0.85123 0.90375 0.88280 0.83048 0.86529 0.77260 1.17690 1.17522 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.25 9.81 59.85 0.59 0.34 16 2 N -0.42 0.53 3.09 -119.89 -0.37 0.16 16 3 C 0.05 -0.06 10.83 -16.84 -0.18 -0.25 16 4 C -0.23 -0.39 6.29 -103.35 -0.65 -1.04 16 5 C 0.59 1.81 7.81 -12.59 -0.10 1.71 16 6 O -0.54 -3.92 16.59 5.26 0.09 -3.83 16 7 N -0.72 0.39 5.26 -54.14 -0.28 0.10 16 8 C 0.12 -0.08 4.30 -67.12 -0.29 -0.37 16 9 H 0.11 0.12 7.50 -51.93 -0.39 -0.27 16 10 C -0.14 0.17 7.27 -25.82 -0.19 -0.02 16 11 C -0.07 0.16 3.86 -90.86 -0.35 -0.19 16 12 H 0.10 -0.29 8.09 -51.93 -0.42 -0.71 16 13 C -0.06 0.05 5.29 -104.63 -0.55 -0.51 16 14 C -0.09 -0.01 9.45 -39.56 -0.37 -0.39 16 15 C -0.09 -0.09 6.22 -39.52 -0.25 -0.33 16 16 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.36 16 17 C -0.10 -0.03 9.79 -39.56 -0.39 -0.42 16 18 C -0.11 0.07 10.05 -39.58 -0.40 -0.32 16 19 C -0.10 0.09 8.60 -39.58 -0.34 -0.25 16 20 C -0.13 0.33 7.29 -25.92 -0.19 0.14 16 21 C -0.14 -0.28 9.49 -37.50 -0.36 -0.64 16 22 C -0.02 0.00 6.14 -81.87 -0.50 -0.50 16 23 C -0.04 0.05 2.87 36.00 0.10 0.15 16 24 O -0.54 1.07 10.32 -35.23 -0.36 0.70 16 25 Si 0.71 -0.87 31.29 -169.99 -5.32 -6.19 16 26 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 27 H 0.08 -0.41 8.13 -51.93 -0.42 -0.84 16 28 H 0.10 -0.29 6.73 -51.93 -0.35 -0.64 16 29 H 0.17 -0.81 7.45 -52.48 -0.39 -1.21 16 30 H 0.40 -1.33 7.65 -40.82 -0.31 -1.65 16 31 H 0.10 -0.15 6.35 -51.93 -0.33 -0.48 16 32 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.13 -0.13 8.05 -52.49 -0.42 -0.55 16 34 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.13 -0.34 8.06 -52.49 -0.42 -0.76 16 36 H 0.13 -0.33 6.69 -52.49 -0.35 -0.68 16 37 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 38 H 0.10 -0.26 7.72 -51.93 -0.40 -0.66 16 39 H 0.15 0.40 6.67 -52.49 -0.35 0.05 16 40 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 41 H 0.38 -2.00 8.70 45.56 0.40 -1.61 16 42 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 43 H -0.25 -0.41 6.77 56.52 0.38 -0.03 16 LS Contribution 377.71 15.07 5.69 5.69 Total: 0.00 -8.77 377.71 -12.75 -21.52 By element: Atomic # 1 Polarization: -7.43 SS G_CDS: -5.49 Total: -12.92 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: -4.41 Total: -2.88 kcal Atomic # 7 Polarization: 0.92 SS G_CDS: -0.65 Total: 0.27 kcal Atomic # 8 Polarization: -2.85 SS G_CDS: -0.28 Total: -3.13 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.32 Total: -6.19 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -8.77 -12.75 -21.52 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.487 kcal (2) G-P(sol) polarization free energy of solvation -8.770 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.717 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.750 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.520 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.967 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.21 seconds