Wall clock time and date at job start Sun Mar 7 2021 01:39:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34659 * 124.85242 * 2 1 4 4 C 1.36769 * 108.39594 * 180.19332 * 3 2 1 5 5 C 1.47271 * 126.94137 * 179.84037 * 4 3 2 6 6 O 1.21619 * 120.00103 * 179.68525 * 5 4 3 7 7 N 1.34780 * 119.99758 * 359.68878 * 5 4 3 8 8 C 1.46497 * 119.99653 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.84935 * 334.66222 * 8 7 5 10 10 C 1.53786 * 113.61643 * 105.85894 * 8 7 5 11 11 C 1.53962 * 87.01719 * 89.22773 * 10 8 7 12 12 H 1.08997 * 113.53543 * 270.80998 * 11 10 8 13 13 C 1.50701 * 113.74004 * 139.94532 * 11 10 8 14 14 C 1.38199 * 119.99240 * 142.40330 * 13 11 10 15 15 C 1.38347 * 119.98608 * 179.97438 * 14 13 11 16 16 Br 1.89099 * 120.00794 * 179.97438 * 15 14 13 17 17 C 1.38298 * 119.98360 * 0.02562 * 15 14 13 18 18 C 1.38241 * 119.98813 * 359.97438 * 17 15 14 19 19 C 1.38226 * 120.01105 * 359.72568 * 18 17 15 20 20 C 1.53781 * 113.61305 * 203.46742 * 8 7 5 21 21 C 1.46684 * 106.11558 * 359.57813 * 4 3 2 22 22 C 1.34484 * 106.33312 * 0.26101 * 21 4 3 23 23 C 1.50698 * 125.57061 * 180.02562 * 22 21 4 24 24 O 1.42906 * 109.47036 * 149.97400 * 23 22 21 25 25 Si 1.86294 * 109.47216 * 29.97958 * 23 22 21 26 26 H 1.08995 * 109.47320 * 270.28513 * 1 2 3 27 27 H 1.09007 * 109.46888 * 30.28753 * 1 2 3 28 28 H 1.09002 * 109.46800 * 150.27947 * 1 2 3 29 29 H 1.08004 * 125.79830 * 0.05798 * 3 2 1 30 30 H 0.96995 * 120.00200 * 359.97438 * 7 5 4 31 31 H 1.08993 * 113.61491 * 203.74894 * 10 8 7 32 32 H 1.09000 * 113.61138 * 334.65232 * 10 8 7 33 33 H 1.08002 * 120.00319 * 0.02562 * 14 13 11 34 34 H 1.08000 * 120.00859 * 180.02562 * 17 15 14 35 35 H 1.08000 * 119.99692 * 180.02562 * 18 17 15 36 36 H 1.07991 * 119.99035 * 180.27882 * 19 18 17 37 37 H 1.09001 * 113.61695 * 25.34675 * 20 8 7 38 38 H 1.08996 * 113.61580 * 156.16953 * 20 8 7 39 39 H 1.07998 * 126.83143 * 180.22848 * 21 4 3 40 40 H 1.08998 * 109.47587 * 269.97185 * 23 22 21 41 41 H 0.96696 * 114.00458 * 300.00587 * 24 23 22 42 42 H 1.48500 * 110.00350 * 179.97438 * 25 23 22 43 43 H 1.48506 * 110.00078 * 301.31840 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5462 0.7176 -0.0044 5 6 4.7285 1.5957 -0.0092 6 8 5.8447 1.1128 -0.0071 7 7 4.5734 2.9346 -0.0160 8 6 5.7495 3.8080 -0.0214 9 1 6.6309 3.3338 0.4102 10 6 6.0135 4.4775 -1.3805 11 6 5.1017 5.6225 -0.9030 12 1 4.0492 5.4690 -1.1414 13 6 5.5955 6.9928 -1.2895 14 6 4.6945 7.9721 -1.6624 15 6 5.1480 9.2302 -2.0167 16 35 3.9157 10.5704 -2.5277 17 6 6.5028 9.5071 -1.9981 18 6 7.4033 8.5269 -1.6249 19 6 6.9494 7.2718 -1.2650 20 6 5.4738 5.2158 0.5327 21 6 3.5375 -0.7492 0.0032 22 6 2.2447 -1.1197 0.0055 23 6 1.7398 -2.5396 0.0135 24 8 0.4812 -2.5937 0.6883 25 14 2.9653 -3.6295 0.8971 26 1 -0.3634 0.0051 1.0276 27 1 -0.3633 0.8875 -0.5183 28 1 -0.3633 -0.8925 -0.5095 29 1 1.8767 2.1241 0.0009 30 1 3.6832 3.3197 -0.0181 31 1 7.0513 4.7773 -1.5253 32 1 5.6105 3.9212 -2.2268 33 1 3.6365 7.7555 -1.6764 34 1 6.8572 10.4892 -2.2742 35 1 8.4614 8.7431 -1.6100 36 1 7.6529 6.5077 -0.9693 37 1 4.6358 5.2548 1.2286 38 1 6.3636 5.7173 0.9131 39 1 4.3981 -1.4017 0.0058 40 1 1.6173 -2.8875 -1.0121 41 1 0.5150 -2.2977 1.6082 42 1 2.4787 -5.0325 0.9124 43 1 4.2870 -3.5573 0.2239 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:26 Heat of formation + Delta-G solvation = 44.453800 kcal Electronic energy + Delta-G solvation = -26652.252340 eV Core-core repulsion = 22712.065236 eV Total energy + Delta-G solvation = -3940.187104 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.47209 -41.44582 -40.11773 -38.68772 -37.71794 -34.66369 -33.71492 -33.14236 -32.15579 -31.20141 -30.09323 -27.67941 -26.67437 -26.55041 -25.86352 -23.91840 -23.46815 -22.39918 -21.09990 -20.60574 -19.99779 -19.02266 -18.07700 -17.32591 -17.15091 -16.78894 -16.75060 -16.39119 -16.14918 -15.82192 -15.47210 -15.33351 -15.13105 -15.03709 -14.73483 -14.55406 -14.46064 -14.24318 -14.06809 -13.48886 -13.39908 -13.37890 -13.22770 -13.04347 -12.88320 -12.31698 -12.20035 -12.09445 -11.99185 -11.89742 -11.52509 -11.34898 -11.13785 -11.03469 -10.74487 -10.10037 -9.83957 -9.61362 -9.56727 -9.21404 -4.99825 0.10452 0.29019 0.64367 0.73819 1.03098 1.39730 1.62878 1.88861 2.04787 2.25285 2.52988 2.58923 3.34883 3.47689 3.55597 3.63305 3.73893 3.86685 3.89441 3.96709 3.99826 4.12367 4.13099 4.30472 4.32082 4.38053 4.43063 4.44819 4.54806 4.67161 4.69666 4.79085 4.80144 4.88689 4.92448 4.95141 4.99187 5.01173 5.04496 5.19065 5.23575 5.37934 5.51494 5.61752 5.69696 5.84867 5.96366 6.24471 6.62625 6.65277 7.34844 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.422 5.422 3 C 0.078 3.922 4 C -0.261 4.261 5 C 0.590 3.410 6 O -0.597 6.597 7 N -0.697 5.697 8 C 0.116 3.884 9 H 0.083 0.917 10 C -0.144 4.144 11 C -0.063 4.063 12 H 0.113 0.887 13 C -0.066 4.066 14 C -0.096 4.096 15 C -0.102 4.102 16 Br -0.061 7.061 17 C -0.108 4.108 18 C -0.114 4.114 19 C -0.106 4.106 20 C -0.121 4.121 21 C -0.168 4.168 22 C -0.014 4.014 23 C -0.034 4.034 24 O -0.546 6.546 25 Si 0.784 3.216 26 H 0.097 0.903 27 H 0.101 0.899 28 H 0.091 0.909 29 H 0.211 0.789 30 H 0.414 0.586 31 H 0.098 0.902 32 H 0.064 0.936 33 H 0.140 0.860 34 H 0.137 0.863 35 H 0.150 0.850 36 H 0.145 0.855 37 H 0.091 0.909 38 H 0.103 0.897 39 H 0.130 0.870 40 H 0.114 0.886 41 H 0.396 0.604 42 H -0.285 1.285 43 H -0.300 1.300 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.781 2.392 3.598 7.217 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.095 5.095 3 C -0.060 4.060 4 C -0.271 4.271 5 C 0.381 3.619 6 O -0.478 6.478 7 N -0.348 5.348 8 C 0.010 3.990 9 H 0.101 0.899 10 C -0.182 4.182 11 C -0.082 4.082 12 H 0.131 0.869 13 C -0.067 4.067 14 C -0.116 4.116 15 C -0.182 4.182 16 Br 0.024 6.976 17 C -0.128 4.128 18 C -0.133 4.133 19 C -0.124 4.124 20 C -0.159 4.159 21 C -0.193 4.193 22 C -0.124 4.124 23 C -0.145 4.145 24 O -0.354 6.354 25 Si 0.690 3.310 26 H 0.115 0.885 27 H 0.120 0.880 28 H 0.110 0.890 29 H 0.228 0.772 30 H 0.251 0.749 31 H 0.116 0.884 32 H 0.083 0.917 33 H 0.158 0.842 34 H 0.155 0.845 35 H 0.167 0.833 36 H 0.163 0.837 37 H 0.109 0.891 38 H 0.121 0.879 39 H 0.148 0.852 40 H 0.132 0.868 41 H 0.246 0.754 42 H -0.212 1.212 43 H -0.227 1.227 Dipole moment (debyes) X Y Z Total from point charges -5.534 1.627 2.788 6.407 hybrid contribution 0.138 0.165 -0.786 0.815 sum -5.396 1.792 2.002 6.028 Atomic orbital electron populations 1.22499 0.74099 1.05740 1.05477 1.43722 1.08179 1.04349 1.53262 1.22410 0.88749 0.93303 1.01548 1.20269 0.92414 0.93529 1.20862 1.17694 0.87761 0.82187 0.74301 1.90752 1.27934 1.76208 1.52938 1.45322 1.09909 1.04499 1.75107 1.21818 0.89254 0.90436 0.97470 0.89919 1.23602 1.01016 0.96248 0.97349 1.21621 1.00532 0.89261 0.96757 0.86927 1.19848 0.93246 0.95279 0.98350 1.21180 1.00919 0.91051 0.98451 1.21957 0.94173 0.94624 1.07421 1.96755 1.58673 1.51199 1.90926 1.21341 0.91239 1.00904 0.99322 1.21456 1.00767 0.92835 0.98225 1.21441 0.95588 0.97270 0.98102 1.23360 1.03780 0.93002 0.95736 1.21723 0.95458 0.93911 1.08191 1.20776 0.90057 0.89989 1.11558 1.24647 0.93826 0.94045 1.01971 1.86456 1.28832 1.89344 1.30742 0.93254 0.73543 0.75441 0.88788 0.88454 0.88028 0.89021 0.77197 0.74892 0.88376 0.91748 0.84209 0.84547 0.83269 0.83750 0.89056 0.87905 0.85202 0.86841 0.75366 1.21236 1.22698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.65 9.81 127.77 1.25 0.61 16 2 N -0.42 1.79 3.09 -533.23 -1.65 0.14 16 3 C 0.08 -0.34 10.83 83.92 0.91 0.57 16 4 C -0.26 -1.05 6.29 -19.04 -0.12 -1.17 16 5 C 0.59 4.44 7.81 86.62 0.68 5.12 16 6 O -0.60 -10.59 16.59 -4.09 -0.07 -10.65 16 7 N -0.70 0.84 5.26 -443.44 -2.33 -1.49 16 8 C 0.12 -0.13 4.30 45.52 0.20 0.07 16 9 H 0.08 0.34 7.50 -2.39 -0.02 0.32 16 10 C -0.14 0.33 7.27 31.18 0.23 0.56 16 11 C -0.06 0.35 3.86 -10.95 -0.04 0.31 16 12 H 0.11 -0.92 8.09 -2.39 -0.02 -0.94 16 13 C -0.07 0.16 5.29 -19.87 -0.11 0.05 16 14 C -0.10 0.04 9.45 22.29 0.21 0.25 16 15 C -0.10 -0.19 6.22 22.31 0.14 -0.05 16 16 Br -0.06 -0.16 33.70 -20.37 -0.69 -0.85 16 17 C -0.11 -0.06 9.79 22.28 0.22 0.16 16 18 C -0.11 0.22 10.05 22.27 0.22 0.44 16 19 C -0.11 0.28 8.60 22.27 0.19 0.47 16 20 C -0.12 0.74 7.29 31.12 0.23 0.97 16 21 C -0.17 -1.02 9.49 23.62 0.22 -0.79 16 22 C -0.01 0.00 6.14 40.98 0.25 0.25 16 23 C -0.03 0.07 2.87 71.24 0.20 0.27 16 24 O -0.55 2.83 10.32 -148.98 -1.54 1.29 16 25 Si 0.78 -0.62 31.29 68.60 2.15 1.52 16 26 H 0.10 -1.33 8.14 -2.39 -0.02 -1.35 16 27 H 0.10 -1.42 8.13 -2.38 -0.02 -1.44 16 28 H 0.09 -0.73 6.73 -2.39 -0.02 -0.75 16 29 H 0.21 -2.85 7.45 -2.91 -0.02 -2.87 16 30 H 0.41 -3.51 7.65 -92.71 -0.71 -4.22 16 31 H 0.10 -0.29 6.35 -2.39 -0.02 -0.31 16 32 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 33 H 0.14 -0.42 8.05 -2.91 -0.02 -0.45 16 34 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 35 H 0.15 -0.88 8.06 -2.91 -0.02 -0.90 16 36 H 0.14 -0.85 6.69 -2.92 -0.02 -0.87 16 37 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 38 H 0.10 -0.66 7.72 -2.39 -0.02 -0.68 16 39 H 0.13 1.23 6.67 -2.91 -0.02 1.21 16 40 H 0.11 -0.12 7.96 -2.39 -0.02 -0.14 16 41 H 0.40 -4.91 8.70 -74.06 -0.64 -5.55 16 42 H -0.29 -1.33 7.11 99.48 0.71 -0.63 16 43 H -0.30 -2.14 6.77 99.48 0.67 -1.47 16 Total: 0.00 -24.41 377.71 0.47 -23.94 By element: Atomic # 1 Polarization: -21.71 SS G_CDS: -0.29 Total: -22.00 kcal Atomic # 6 Polarization: 3.22 SS G_CDS: 4.88 Total: 8.10 kcal Atomic # 7 Polarization: 2.62 SS G_CDS: -3.98 Total: -1.35 kcal Atomic # 8 Polarization: -7.76 SS G_CDS: -1.61 Total: -9.36 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: 2.15 Total: 1.52 kcal Atomic # 35 Polarization: -0.16 SS G_CDS: -0.69 Total: -0.85 kcal Total: -24.41 0.47 -23.94 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.391 kcal (2) G-P(sol) polarization free energy of solvation -24.412 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.979 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.475 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.937 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.454 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds