Wall clock time and date at job start Sun Mar 7 2021 01:39:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36418 * 125.80690 * 2 1 4 4 C 1.47383 * 127.18586 * 0.02562 * 3 2 1 5 5 O 1.21609 * 120.00028 * 359.70377 * 4 3 2 6 6 N 1.34780 * 119.99405 * 179.70878 * 4 3 2 7 7 C 1.46497 * 119.99653 * 179.97438 * 6 4 3 8 8 H 1.09002 * 112.84935 * 334.66222 * 7 6 4 9 9 C 1.53786 * 113.61643 * 105.85894 * 7 6 4 10 10 C 1.53962 * 87.01719 * 89.22773 * 9 7 6 11 11 H 1.09002 * 113.61454 * 270.79954 * 10 9 7 12 12 C 1.50699 * 113.66451 * 139.93336 * 10 9 7 13 13 C 1.38197 * 119.99104 * 142.43774 * 12 10 9 14 14 C 1.38349 * 119.98751 * 179.97438 * 13 12 10 15 15 Br 1.89099 * 120.01059 * 179.97438 * 14 13 12 16 16 C 1.38311 * 119.97821 * 0.02562 * 14 13 12 17 17 C 1.38231 * 119.99090 * 359.97438 * 16 14 13 18 18 C 1.38226 * 120.00951 * 359.72857 * 17 16 14 19 19 C 1.53781 * 113.61305 * 203.46742 * 7 6 4 20 20 C 1.47020 * 105.61727 * 179.75047 * 3 2 1 21 21 C 1.34177 * 105.95366 * 0.22950 * 20 3 2 22 22 C 1.50701 * 125.44038 * 180.02562 * 21 20 3 23 23 O 1.42894 * 109.47082 * 64.99325 * 22 21 20 24 24 Si 1.86298 * 109.47528 * 184.99956 * 22 21 20 25 25 O 1.33655 * 125.79706 * 180.14268 * 2 1 3 26 26 H 1.09003 * 109.46729 * 89.99530 * 1 2 3 27 27 H 1.08996 * 109.47508 * 209.99958 * 1 2 3 28 28 H 1.09000 * 109.46788 * 330.00367 * 1 2 3 29 29 H 0.96995 * 120.00200 * 359.97438 * 6 4 3 30 30 H 1.08993 * 113.61491 * 203.74894 * 9 7 6 31 31 H 1.09000 * 113.61138 * 334.65232 * 9 7 6 32 32 H 1.07998 * 120.00696 * 359.97438 * 13 12 10 33 33 H 1.07998 * 120.00168 * 180.02562 * 16 14 13 34 34 H 1.08000 * 119.99923 * 180.02562 * 17 16 14 35 35 H 1.08001 * 119.98728 * 180.27463 * 18 17 16 36 36 H 1.09001 * 113.61695 * 25.34675 * 19 7 6 37 37 H 1.08997 * 113.61223 * 156.25258 * 19 7 6 38 38 H 1.07994 * 127.02460 * 180.20276 * 20 3 2 39 39 H 1.09001 * 109.46799 * 304.99726 * 22 21 20 40 40 H 0.96700 * 114.00270 * 60.00565 * 23 22 21 41 41 H 1.48504 * 110.00075 * 58.67793 * 24 22 21 42 42 H 1.48495 * 110.00071 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3051 1.1063 0.0000 4 6 1.8740 2.5157 0.0005 5 8 0.6891 2.7891 -0.0044 6 7 2.7932 3.5014 0.0064 7 6 2.3648 4.9024 0.0063 8 1 1.3749 5.0423 -0.4281 9 6 2.5463 5.6022 1.3637 10 6 3.9607 5.9813 0.8883 11 1 4.7174 5.2350 1.1304 12 6 4.3735 7.3789 1.2720 13 6 5.6786 7.6353 1.6473 14 6 6.0575 8.9186 1.9990 15 35 7.8430 9.2700 2.5133 16 6 5.1298 9.9441 1.9755 17 6 3.8246 9.6867 1.6000 18 6 3.4479 8.4056 1.2427 19 6 3.4233 5.8702 -0.5483 20 6 3.6850 0.5989 0.0062 21 6 3.5859 -0.7392 0.0041 22 6 4.7457 -1.7013 0.0091 23 8 5.4694 -1.5685 1.2341 24 14 4.1075 -3.4444 -0.1494 25 8 2.2888 -1.0841 -0.0027 26 1 -0.3633 0.0001 -1.0277 27 1 -0.3634 -0.8899 0.5138 28 1 -0.3633 0.8900 0.5138 29 1 3.7383 3.2833 0.0106 30 1 1.8884 6.4597 1.5042 31 1 2.5386 4.9179 2.2121 32 1 6.4025 6.8342 1.6659 33 1 5.4253 10.9461 2.2496 34 1 3.1002 10.4874 1.5812 35 1 2.4291 8.2057 0.9452 36 1 4.1226 5.4022 -1.2411 37 1 3.0056 6.8012 -0.9314 38 1 4.5929 1.1837 0.0109 39 1 5.4062 -1.4786 -0.8289 40 1 4.9427 -1.7524 2.0240 41 1 3.3261 -3.5870 -1.4041 42 1 5.2418 -4.4028 -0.1463 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:50 Heat of formation + Delta-G solvation = 3.240652 kcal Electronic energy + Delta-G solvation = -26911.028833 eV Core-core repulsion = 22871.335931 eV Total energy + Delta-G solvation = -4039.692903 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.046 amu Computer time = 2.06 seconds Orbital eigenvalues (eV) -43.76586 -41.61754 -40.24765 -38.81275 -38.10746 -34.79759 -34.02357 -33.23515 -33.04681 -32.04588 -30.15610 -29.43710 -26.85554 -26.74410 -25.67694 -24.30624 -23.59438 -22.78158 -22.08574 -20.80500 -20.02310 -19.01336 -18.27806 -17.88413 -17.65737 -17.10207 -16.79211 -16.53692 -16.21544 -16.02492 -15.86730 -15.67861 -15.12665 -15.01995 -14.63435 -14.54315 -14.39949 -14.26381 -14.14232 -13.96955 -13.88803 -13.61587 -13.46801 -12.99353 -12.92533 -12.84900 -12.41877 -12.17723 -12.06105 -12.02447 -11.60195 -11.41640 -11.17860 -11.03109 -10.90464 -10.66680 -10.12404 -9.90930 -9.65361 -9.58584 -5.10109 0.04570 0.21159 0.27940 0.64758 0.81211 1.07476 1.38533 1.70700 1.86895 2.08819 2.31328 2.50556 3.12337 3.30995 3.34324 3.49348 3.56790 3.70516 3.73899 3.76673 3.83949 3.96616 4.00199 4.09650 4.18862 4.19137 4.33311 4.37705 4.51626 4.52867 4.56674 4.59715 4.61905 4.70960 4.79357 4.82739 4.86735 4.90554 5.01233 5.09865 5.15615 5.18950 5.27979 5.41974 5.55356 5.74520 5.89081 6.30667 6.45652 7.20421 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.097 3.903 3 C -0.254 4.254 4 C 0.596 3.404 5 O -0.537 6.537 6 N -0.707 5.707 7 C 0.122 3.878 8 H 0.107 0.893 9 C -0.143 4.143 10 C -0.074 4.074 11 H 0.099 0.901 12 C -0.065 4.065 13 C -0.088 4.088 14 C -0.088 4.088 15 Br -0.050 7.050 16 C -0.095 4.095 17 C -0.110 4.110 18 C -0.102 4.102 19 C -0.135 4.135 20 C -0.148 4.148 21 C -0.056 4.056 22 C -0.028 4.028 23 O -0.530 6.530 24 Si 0.703 3.297 25 O -0.168 6.168 26 H 0.092 0.908 27 H 0.083 0.917 28 H 0.111 0.889 29 H 0.401 0.599 30 H 0.097 0.903 31 H 0.076 0.924 32 H 0.131 0.869 33 H 0.133 0.867 34 H 0.133 0.867 35 H 0.131 0.869 36 H 0.078 0.922 37 H 0.100 0.900 38 H 0.157 0.843 39 H 0.133 0.867 40 H 0.384 0.616 41 H -0.253 1.253 42 H -0.246 1.246 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.121 -1.143 0.694 1.745 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.043 3.957 3 C -0.259 4.259 4 C 0.385 3.615 5 O -0.415 6.415 6 N -0.358 5.358 7 C 0.016 3.984 8 H 0.125 0.875 9 C -0.182 4.182 10 C -0.093 4.093 11 H 0.117 0.883 12 C -0.066 4.066 13 C -0.108 4.108 14 C -0.167 4.167 15 Br 0.036 6.964 16 C -0.115 4.115 17 C -0.128 4.128 18 C -0.120 4.120 19 C -0.173 4.173 20 C -0.168 4.168 21 C -0.104 4.104 22 C -0.138 4.138 23 O -0.336 6.336 24 Si 0.603 3.397 25 O -0.065 6.065 26 H 0.110 0.890 27 H 0.101 0.899 28 H 0.129 0.871 29 H 0.236 0.764 30 H 0.115 0.885 31 H 0.095 0.905 32 H 0.149 0.851 33 H 0.150 0.850 34 H 0.151 0.849 35 H 0.148 0.852 36 H 0.097 0.903 37 H 0.118 0.882 38 H 0.175 0.825 39 H 0.150 0.850 40 H 0.232 0.768 41 H -0.177 1.177 42 H -0.171 1.171 Dipole moment (debyes) X Y Z Total from point charges -0.888 -1.702 -0.012 1.920 hybrid contribution 0.598 0.727 -0.319 0.994 sum -0.291 -0.976 -0.331 1.071 Atomic orbital electron populations 1.20710 0.83283 1.05516 1.04791 1.22929 0.94091 0.82834 0.95798 1.21093 0.93246 0.93722 1.17811 1.17149 0.85362 0.83650 0.75309 1.90779 1.16488 1.83951 1.50290 1.45439 1.09686 1.05090 1.75604 1.21835 0.99620 0.79860 0.97053 0.87483 1.23606 0.95586 1.00943 0.98018 1.21651 0.97590 0.93232 0.96781 0.88267 1.19686 0.92861 0.95269 0.98753 1.21025 0.96262 0.95164 0.98324 1.21845 0.91931 0.96512 1.06411 1.96783 1.13084 1.95904 1.90663 1.21172 0.92851 0.98605 0.98884 1.21201 0.95698 0.97210 0.98735 1.21180 0.99768 0.92402 0.98660 1.23431 0.98040 1.00014 0.95828 1.22571 0.96437 0.93532 1.04254 1.22614 0.82937 0.95636 1.09198 1.24423 0.90710 1.07714 0.90970 1.86561 1.39022 1.93149 1.14884 0.94174 0.82723 0.74496 0.88294 1.83678 1.16355 1.35021 1.71407 0.88987 0.89851 0.87050 0.76377 0.88516 0.90495 0.85087 0.84957 0.84903 0.85158 0.90341 0.88164 0.82504 0.84967 0.76772 1.17748 1.17061 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.05 9.89 36.01 0.36 0.40 16 2 C 0.10 0.11 7.37 -34.97 -0.26 -0.14 16 3 C -0.25 -0.37 6.31 -103.27 -0.65 -1.02 16 4 C 0.60 1.31 7.81 -12.54 -0.10 1.21 16 5 O -0.54 -2.63 14.47 5.27 0.08 -2.56 16 6 N -0.71 0.37 5.26 -54.10 -0.28 0.09 16 7 C 0.12 -0.12 4.29 -67.12 -0.29 -0.41 16 8 H 0.11 0.04 7.50 -51.93 -0.39 -0.35 16 9 C -0.14 0.22 7.27 -25.82 -0.19 0.03 16 10 C -0.07 0.15 3.87 -90.86 -0.35 -0.20 16 11 H 0.10 -0.26 8.09 -51.93 -0.42 -0.68 16 12 C -0.06 0.04 5.29 -104.63 -0.55 -0.51 16 13 C -0.09 -0.03 9.45 -39.56 -0.37 -0.40 16 14 C -0.09 -0.09 6.22 -39.51 -0.25 -0.34 16 15 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 16 C -0.10 -0.03 9.79 -39.56 -0.39 -0.42 16 17 C -0.11 0.08 10.05 -39.59 -0.40 -0.32 16 18 C -0.10 0.11 8.60 -39.58 -0.34 -0.23 16 19 C -0.14 0.33 7.29 -25.92 -0.19 0.14 16 20 C -0.15 0.00 10.48 -37.45 -0.39 -0.39 16 21 C -0.06 0.00 6.18 -35.74 -0.22 -0.22 16 22 C -0.03 0.04 2.97 36.01 0.11 0.14 16 23 O -0.53 0.67 12.88 -35.23 -0.45 0.22 16 24 Si 0.70 -1.06 32.09 -169.99 -5.46 -6.52 16 25 O -0.17 -0.12 8.90 7.63 0.07 -0.06 16 26 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 28 H 0.11 0.07 6.49 -51.93 -0.34 -0.27 16 29 H 0.40 -1.00 7.88 -40.82 -0.32 -1.32 16 30 H 0.10 -0.20 6.34 -51.93 -0.33 -0.53 16 31 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.13 -0.09 8.05 -52.49 -0.42 -0.51 16 33 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 34 H 0.13 -0.35 8.06 -52.49 -0.42 -0.78 16 35 H 0.13 -0.36 6.68 -52.49 -0.35 -0.71 16 36 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 37 H 0.10 -0.27 7.71 -51.93 -0.40 -0.67 16 38 H 0.16 -0.31 7.74 -52.49 -0.41 -0.71 16 39 H 0.13 -0.24 7.96 -51.93 -0.41 -0.65 16 40 H 0.38 -1.87 8.70 45.56 0.40 -1.48 16 41 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 42 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 LS Contribution 376.48 15.07 5.67 5.67 Total: 0.00 -7.16 376.48 -12.27 -19.43 By element: Atomic # 1 Polarization: -6.12 SS G_CDS: -5.13 Total: -11.25 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -4.47 Total: -2.68 kcal Atomic # 7 Polarization: 0.37 SS G_CDS: -0.28 Total: 0.09 kcal Atomic # 8 Polarization: -2.08 SS G_CDS: -0.31 Total: -2.39 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.46 Total: -6.52 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -7.16 -12.27 -19.43 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.672 kcal (2) G-P(sol) polarization free energy of solvation -7.161 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.270 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.431 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.241 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.06 seconds