Wall clock time and date at job start Sun Mar 7 2021 01:39:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86293 * 109.47329 * 2 1 4 4 C 1.50701 * 109.46570 * 119.99841 * 2 1 3 5 5 C 1.38058 * 119.80703 * 65.02168 * 4 2 1 6 6 C 1.38713 * 120.08230 * 179.71715 * 5 4 2 7 7 O 1.35661 * 120.14602 * 180.27631 * 6 5 4 8 8 C 1.40137 * 119.70180 * 0.51134 * 6 5 4 9 9 C 1.47534 * 120.19195 * 179.76577 * 8 6 5 10 10 O 1.21583 * 119.99765 * 359.72452 * 9 8 6 11 11 N 1.34771 * 119.99793 * 179.71991 * 9 8 6 12 12 C 1.46499 * 119.99903 * 180.02562 * 11 9 8 13 13 H 1.09000 * 112.84849 * 336.19231 * 12 11 9 14 14 C 1.53779 * 113.61746 * 107.50534 * 12 11 9 15 15 C 1.53779 * 87.08402 * 89.11614 * 14 12 11 16 16 H 1.09002 * 113.61557 * 270.88569 * 15 14 12 17 17 C 1.50699 * 113.61429 * 139.98140 * 15 14 12 18 18 C 1.38220 * 119.99134 * 142.50364 * 17 15 14 19 19 C 1.38272 * 120.01711 * 179.97438 * 18 17 15 20 20 C 1.38187 * 120.00735 * 0.04290 * 19 18 17 21 21 C 1.38346 * 119.99596 * 359.97438 * 20 19 18 22 22 Br 1.89099 * 120.01322 * 180.02562 * 21 20 19 23 23 C 1.38236 * 119.99679 * 322.22619 * 17 15 14 24 24 C 1.53784 * 87.08045 * 25.43458 * 15 14 12 25 25 C 1.39716 * 119.61373 * 359.48973 * 8 6 5 26 26 C 1.37780 * 119.90990 * 0.25603 * 25 8 6 27 27 H 0.96697 * 113.99419 * 60.00045 * 1 2 3 28 28 H 1.08999 * 109.46847 * 239.99235 * 2 1 3 29 29 H 1.48499 * 110.00400 * 59.99792 * 3 2 1 30 30 H 1.48498 * 109.99988 * 181.31575 * 3 2 1 31 31 H 1.08000 * 119.95538 * 359.95293 * 5 4 2 32 32 H 0.96694 * 114.00053 * 270.22947 * 7 6 5 33 33 H 0.97001 * 120.00748 * 0.02562 * 11 9 8 34 34 H 1.09006 * 113.61280 * 203.66438 * 14 12 11 35 35 H 1.08999 * 113.61062 * 334.48192 * 14 12 11 36 36 H 1.07997 * 119.99378 * 359.97438 * 18 17 15 37 37 H 1.08003 * 119.99279 * 180.02562 * 19 18 17 38 38 H 1.08004 * 120.00564 * 180.02562 * 20 19 18 39 39 H 1.08003 * 120.00634 * 0.02562 * 23 17 15 40 40 H 1.09004 * 113.61451 * 220.02152 * 24 15 14 41 41 H 1.08994 * 113.61477 * 89.11454 * 24 15 14 42 42 H 1.07998 * 120.04202 * 180.27647 * 25 8 6 43 43 H 1.07996 * 119.85433 * 180.02562 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6830 -2.0586 1.3940 6 6 2.1477 -2.7195 2.5216 7 8 1.9093 -4.0454 2.6808 8 6 2.8601 -2.0102 3.4979 9 6 3.3548 -2.7012 4.7039 10 8 3.1404 -3.8883 4.8553 11 7 4.0444 -2.0164 5.6376 12 6 4.5362 -2.7027 6.8349 13 1 3.9669 -3.6017 7.0713 14 6 6.0591 -2.9160 6.8410 15 6 6.1701 -1.5403 7.5190 16 1 6.2510 -0.7119 6.8152 17 6 7.2087 -1.4869 8.6097 18 6 7.9761 -0.3497 8.7779 19 6 8.9288 -0.2999 9.7788 20 6 9.1146 -1.3875 10.6107 21 6 8.3470 -2.5261 10.4425 22 35 8.6003 -4.0145 11.5811 23 6 7.3897 -2.5731 9.4453 24 6 4.7413 -1.7690 8.0396 25 6 3.1042 -0.6461 3.3197 26 6 2.6399 -0.0067 2.1910 27 1 -0.3932 0.4417 -0.7651 28 1 1.7923 -0.5140 -0.8899 29 1 1.5616 2.4679 1.2084 30 1 3.5347 1.7701 -0.0320 31 1 1.1296 -2.6002 0.6411 32 1 1.0839 -4.2439 3.1438 33 1 4.2153 -1.0692 5.5170 34 1 6.3816 -3.7424 7.4745 35 1 6.4991 -2.9500 5.8443 36 1 7.8316 0.5003 8.1275 37 1 9.5279 0.5891 9.9102 38 1 9.8585 -1.3485 11.3928 39 1 6.7873 -3.4601 9.3164 40 1 4.1177 -0.8754 8.0106 41 1 4.7036 -2.2817 9.0007 42 1 3.6564 -0.0937 4.0655 43 1 2.8295 1.0476 2.0540 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:59 Heat of formation + Delta-G solvation = -17.861905 kcal Electronic energy + Delta-G solvation = -28237.176636 eV Core-core repulsion = 24068.342518 eV Total energy + Delta-G solvation = -4168.834119 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.046 amu Computer time = 2.21 seconds Orbital eigenvalues (eV) -41.92294 -41.20169 -39.96814 -38.83843 -38.24064 -37.25944 -34.75548 -33.43221 -32.89652 -31.68034 -31.18656 -30.26992 -27.76400 -26.86495 -26.24045 -23.98947 -23.90530 -23.31062 -22.52594 -21.74215 -20.29971 -19.30945 -18.77369 -18.56641 -18.12391 -17.61762 -16.91097 -16.69489 -16.43286 -16.34147 -16.16482 -15.85793 -15.55373 -15.31906 -15.15133 -15.03956 -14.60411 -14.52684 -14.31344 -14.20366 -14.02998 -13.64317 -13.55032 -13.34259 -12.99957 -12.95830 -12.54216 -12.48758 -12.15202 -12.07198 -12.00586 -11.79118 -11.61241 -11.37279 -11.21970 -10.82063 -10.52673 -10.21248 -10.08000 -9.91051 -9.83412 -9.67364 -5.09791 -0.45948 0.03860 0.04491 0.18691 0.63909 1.11469 1.50297 1.71144 1.81689 1.96072 2.47921 2.50921 3.06375 3.16864 3.28798 3.45918 3.49384 3.54809 3.62012 3.65102 3.71953 3.81818 3.93166 3.96233 4.04135 4.13387 4.16160 4.16851 4.30706 4.45223 4.50514 4.56490 4.59548 4.63777 4.71029 4.81719 4.84210 4.87545 4.89670 4.97917 5.07554 5.14084 5.14909 5.25610 5.40512 5.45854 5.51507 5.72865 6.38363 6.45881 6.67541 7.16872 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.079 4.079 3 Si 0.687 3.313 4 C -0.030 4.030 5 C -0.125 4.125 6 C 0.176 3.824 7 O -0.475 6.475 8 C -0.165 4.165 9 C 0.563 3.437 10 O -0.513 6.513 11 N -0.712 5.712 12 C 0.121 3.879 13 H 0.108 0.892 14 C -0.145 4.145 15 C -0.074 4.074 16 H 0.100 0.900 17 C -0.065 4.065 18 C -0.101 4.101 19 C -0.110 4.110 20 C -0.095 4.095 21 C -0.087 4.087 22 Br -0.049 7.049 23 C -0.088 4.088 24 C -0.136 4.136 25 C -0.063 4.063 26 C -0.142 4.142 27 H 0.385 0.615 28 H 0.080 0.920 29 H -0.249 1.249 30 H -0.253 1.253 31 H 0.143 0.857 32 H 0.399 0.601 33 H 0.399 0.601 34 H 0.097 0.903 35 H 0.077 0.923 36 H 0.128 0.872 37 H 0.133 0.867 38 H 0.133 0.867 39 H 0.134 0.866 40 H 0.078 0.922 41 H 0.100 0.900 42 H 0.133 0.867 43 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.091 6.994 -3.382 7.845 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.189 4.189 3 Si 0.588 3.412 4 C -0.031 4.031 5 C -0.144 4.144 6 C 0.129 3.871 7 O -0.286 6.286 8 C -0.169 4.169 9 C 0.350 3.650 10 O -0.389 6.389 11 N -0.365 5.365 12 C 0.016 3.984 13 H 0.126 0.874 14 C -0.183 4.183 15 C -0.092 4.092 16 H 0.118 0.882 17 C -0.066 4.066 18 C -0.120 4.120 19 C -0.129 4.129 20 C -0.115 4.115 21 C -0.166 4.166 22 Br 0.037 6.963 23 C -0.108 4.108 24 C -0.174 4.174 25 C -0.082 4.082 26 C -0.160 4.160 27 H 0.233 0.767 28 H 0.098 0.902 29 H -0.173 1.173 30 H -0.177 1.177 31 H 0.160 0.840 32 H 0.258 0.742 33 H 0.234 0.766 34 H 0.115 0.885 35 H 0.095 0.905 36 H 0.146 0.854 37 H 0.151 0.849 38 H 0.151 0.849 39 H 0.151 0.849 40 H 0.097 0.903 41 H 0.118 0.882 42 H 0.151 0.849 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -0.059 5.748 -2.135 6.132 hybrid contribution -0.170 0.386 0.123 0.439 sum -0.228 6.134 -2.012 6.460 Atomic orbital electron populations 1.86486 1.16759 1.81936 1.49873 1.24788 0.86129 1.10811 0.97214 0.95059 0.80863 0.77750 0.87507 1.19430 0.95731 0.93505 0.94394 1.21342 1.00567 0.93785 0.98704 1.18481 0.93530 0.83502 0.91562 1.84755 1.46254 1.17685 1.79947 1.20387 1.05845 0.94213 0.96447 1.17995 0.77954 0.86647 0.82360 1.90838 1.56396 1.14423 1.77219 1.45580 1.56827 1.12958 1.21097 1.21842 0.95125 0.96961 0.84484 0.87361 1.23586 0.96154 0.96710 1.01874 1.21622 0.93062 0.99115 0.95430 0.88194 1.19676 0.97024 0.93557 0.96371 1.21220 0.95201 0.97653 0.97882 1.21206 0.98240 0.98390 0.95079 1.21171 0.98733 0.91937 0.99664 1.21831 1.01507 0.94438 0.98860 1.96791 1.96803 1.39173 1.63526 1.20973 0.96985 0.99079 0.93774 1.23448 0.95269 1.00334 0.98305 1.21074 0.97382 0.92697 0.97042 1.20823 1.00983 0.99494 0.94669 0.76658 0.90210 1.17315 1.17747 0.83966 0.74205 0.76570 0.88512 0.90466 0.85403 0.84949 0.84937 0.84852 0.90304 0.88155 0.84914 0.85518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.55 12.81 -35.23 -0.45 0.10 16 2 C -0.08 0.10 2.78 36.01 0.10 0.20 16 3 Si 0.69 -1.67 29.83 -169.99 -5.07 -6.74 16 4 C -0.03 -0.03 5.39 -104.57 -0.56 -0.60 16 5 C -0.13 -0.21 9.60 -39.47 -0.38 -0.59 16 6 C 0.18 0.48 6.72 -38.69 -0.26 0.22 16 7 O -0.47 -1.54 11.58 -40.56 -0.47 -2.01 16 8 C -0.17 -0.34 5.89 -104.84 -0.62 -0.96 16 9 C 0.56 1.63 7.76 -12.47 -0.10 1.53 16 10 O -0.51 -3.27 14.76 -16.59 -0.24 -3.52 16 11 N -0.71 0.23 5.21 -54.06 -0.28 -0.05 16 12 C 0.12 -0.06 4.32 -67.12 -0.29 -0.35 16 13 H 0.11 0.13 7.46 -51.93 -0.39 -0.26 16 14 C -0.14 0.12 7.25 -25.92 -0.19 -0.07 16 15 C -0.07 0.15 3.86 -90.96 -0.35 -0.20 16 16 H 0.10 -0.31 8.10 -51.93 -0.42 -0.73 16 17 C -0.07 0.04 5.29 -104.63 -0.55 -0.52 16 18 C -0.10 0.09 9.71 -39.58 -0.38 -0.29 16 19 C -0.11 0.07 10.05 -39.59 -0.40 -0.33 16 20 C -0.10 -0.04 9.79 -39.56 -0.39 -0.42 16 21 C -0.09 -0.10 6.22 -39.52 -0.25 -0.34 16 22 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.37 16 23 C -0.09 -0.03 8.34 -39.56 -0.33 -0.36 16 24 C -0.14 0.29 7.29 -25.91 -0.19 0.10 16 25 C -0.06 0.00 9.54 -39.20 -0.37 -0.37 16 26 C -0.14 -0.09 8.64 -39.63 -0.34 -0.43 16 27 H 0.39 -2.30 8.74 45.56 0.40 -1.90 16 28 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 29 H -0.25 -0.10 7.04 56.52 0.40 0.30 16 30 H -0.25 0.01 7.11 56.52 0.40 0.41 16 31 H 0.14 0.11 8.06 -52.49 -0.42 -0.32 16 32 H 0.40 -0.18 9.06 45.56 0.41 0.23 16 33 H 0.40 -1.15 6.73 -40.82 -0.27 -1.43 16 34 H 0.10 -0.08 6.32 -51.93 -0.33 -0.41 16 35 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 36 H 0.13 -0.35 8.05 -52.49 -0.42 -0.78 16 37 H 0.13 -0.34 8.06 -52.48 -0.42 -0.76 16 38 H 0.13 -0.09 8.06 -52.48 -0.42 -0.52 16 39 H 0.13 -0.07 6.67 -52.48 -0.35 -0.42 16 40 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 41 H 0.10 -0.20 7.71 -51.93 -0.40 -0.60 16 42 H 0.13 -0.43 6.40 -52.49 -0.34 -0.77 16 43 H 0.13 -0.05 4.83 -52.49 -0.25 -0.30 16 LS Contribution 378.99 15.07 5.71 5.71 Total: 0.00 -9.54 378.99 -13.04 -22.58 By element: Atomic # 1 Polarization: -5.84 SS G_CDS: -4.09 Total: -9.93 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -5.85 Total: -3.78 kcal Atomic # 7 Polarization: 0.23 SS G_CDS: -0.28 Total: -0.05 kcal Atomic # 8 Polarization: -4.26 SS G_CDS: -1.17 Total: -5.42 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: -5.07 Total: -6.74 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.37 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -9.54 -13.04 -22.58 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.722 kcal (2) G-P(sol) polarization free energy of solvation -9.544 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.823 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.039 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.584 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.862 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.21 seconds