Wall clock time and date at job start Sun Mar 7 2021 01:39:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86293 * 109.47329 * 2 1 4 4 C 1.50701 * 109.46570 * 119.99841 * 2 1 3 5 5 C 1.38058 * 119.80703 * 65.02168 * 4 2 1 6 6 C 1.38713 * 120.08230 * 179.71715 * 5 4 2 7 7 O 1.35661 * 120.14602 * 180.27631 * 6 5 4 8 8 C 1.40137 * 119.70180 * 0.51134 * 6 5 4 9 9 C 1.47534 * 120.19195 * 179.76577 * 8 6 5 10 10 O 1.21583 * 119.99765 * 359.72452 * 9 8 6 11 11 N 1.34771 * 119.99793 * 179.71991 * 9 8 6 12 12 C 1.46499 * 119.99903 * 180.02562 * 11 9 8 13 13 H 1.09000 * 112.84849 * 336.19231 * 12 11 9 14 14 C 1.53779 * 113.61746 * 107.50534 * 12 11 9 15 15 C 1.53779 * 87.08402 * 89.11614 * 14 12 11 16 16 H 1.09002 * 113.61557 * 270.88569 * 15 14 12 17 17 C 1.50699 * 113.61429 * 139.98140 * 15 14 12 18 18 C 1.38220 * 119.99134 * 142.50364 * 17 15 14 19 19 C 1.38272 * 120.01711 * 179.97438 * 18 17 15 20 20 C 1.38187 * 120.00735 * 0.04290 * 19 18 17 21 21 C 1.38346 * 119.99596 * 359.97438 * 20 19 18 22 22 Br 1.89099 * 120.01322 * 180.02562 * 21 20 19 23 23 C 1.38236 * 119.99679 * 322.22619 * 17 15 14 24 24 C 1.53784 * 87.08045 * 25.43458 * 15 14 12 25 25 C 1.39716 * 119.61373 * 359.48973 * 8 6 5 26 26 C 1.37780 * 119.90990 * 0.25603 * 25 8 6 27 27 H 0.96697 * 113.99419 * 60.00045 * 1 2 3 28 28 H 1.08999 * 109.46847 * 239.99235 * 2 1 3 29 29 H 1.48499 * 110.00400 * 59.99792 * 3 2 1 30 30 H 1.48498 * 109.99988 * 181.31575 * 3 2 1 31 31 H 1.08000 * 119.95538 * 359.95293 * 5 4 2 32 32 H 0.96694 * 114.00053 * 270.22947 * 7 6 5 33 33 H 0.97001 * 120.00748 * 0.02562 * 11 9 8 34 34 H 1.09006 * 113.61280 * 203.66438 * 14 12 11 35 35 H 1.08999 * 113.61062 * 334.48192 * 14 12 11 36 36 H 1.07997 * 119.99378 * 359.97438 * 18 17 15 37 37 H 1.08003 * 119.99279 * 180.02562 * 19 18 17 38 38 H 1.08004 * 120.00564 * 180.02562 * 20 19 18 39 39 H 1.08003 * 120.00634 * 0.02562 * 23 17 15 40 40 H 1.09004 * 113.61451 * 220.02152 * 24 15 14 41 41 H 1.08994 * 113.61477 * 89.11454 * 24 15 14 42 42 H 1.07998 * 120.04202 * 180.27647 * 25 8 6 43 43 H 1.07996 * 119.85433 * 180.02562 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6830 -2.0586 1.3940 6 6 2.1477 -2.7195 2.5216 7 8 1.9093 -4.0454 2.6808 8 6 2.8601 -2.0102 3.4979 9 6 3.3548 -2.7012 4.7039 10 8 3.1404 -3.8883 4.8553 11 7 4.0444 -2.0164 5.6376 12 6 4.5362 -2.7027 6.8349 13 1 3.9669 -3.6017 7.0713 14 6 6.0591 -2.9160 6.8410 15 6 6.1701 -1.5403 7.5190 16 1 6.2510 -0.7119 6.8152 17 6 7.2087 -1.4869 8.6097 18 6 7.9761 -0.3497 8.7779 19 6 8.9288 -0.2999 9.7788 20 6 9.1146 -1.3875 10.6107 21 6 8.3470 -2.5261 10.4425 22 35 8.6003 -4.0145 11.5811 23 6 7.3897 -2.5731 9.4453 24 6 4.7413 -1.7690 8.0396 25 6 3.1042 -0.6461 3.3197 26 6 2.6399 -0.0067 2.1910 27 1 -0.3932 0.4417 -0.7651 28 1 1.7923 -0.5140 -0.8899 29 1 1.5616 2.4679 1.2084 30 1 3.5347 1.7701 -0.0320 31 1 1.1296 -2.6002 0.6411 32 1 1.0839 -4.2439 3.1438 33 1 4.2153 -1.0692 5.5170 34 1 6.3816 -3.7424 7.4745 35 1 6.4991 -2.9500 5.8443 36 1 7.8316 0.5003 8.1275 37 1 9.5279 0.5891 9.9102 38 1 9.8585 -1.3485 11.3928 39 1 6.7873 -3.4601 9.3164 40 1 4.1177 -0.8754 8.0106 41 1 4.7036 -2.2817 9.0007 42 1 3.6564 -0.0937 4.0655 43 1 2.8295 1.0476 2.0540 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:58 Heat of formation + Delta-G solvation = -16.386566 kcal Electronic energy + Delta-G solvation = -28237.112661 eV Core-core repulsion = 24068.342518 eV Total energy + Delta-G solvation = -4168.770143 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.046 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -41.97694 -41.19071 -40.01147 -38.85824 -38.31535 -37.22703 -34.85946 -33.42604 -32.89267 -31.64546 -31.25981 -30.26752 -27.74962 -26.77375 -26.18304 -24.02954 -23.89150 -23.30358 -22.49729 -21.82554 -20.27943 -19.37327 -18.86063 -18.42713 -18.08123 -17.66302 -16.86097 -16.72673 -16.45498 -16.38815 -16.15867 -15.92683 -15.60453 -15.27254 -15.13825 -15.00101 -14.58823 -14.48224 -14.25649 -14.17317 -14.04716 -13.58791 -13.50892 -13.38639 -12.99959 -12.95983 -12.49602 -12.40375 -12.13543 -12.06404 -11.94277 -11.85395 -11.58708 -11.35842 -11.23715 -11.01563 -10.45413 -10.26264 -10.09286 -9.92029 -9.85618 -9.64729 -4.89907 -0.54293 -0.00523 0.07982 0.24119 0.61331 1.28397 1.56298 1.70312 1.90616 1.96365 2.42295 2.54886 3.02613 3.25278 3.37227 3.45487 3.57368 3.59601 3.65106 3.73967 3.80630 3.90019 4.01090 4.02369 4.12339 4.19296 4.24701 4.25788 4.38699 4.50776 4.55530 4.62601 4.65094 4.69711 4.76300 4.83206 4.90791 4.93314 4.95641 5.00374 5.07865 5.10690 5.19241 5.33113 5.43402 5.45092 5.56385 5.81970 6.36362 6.62322 6.87124 7.06247 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.091 4.091 3 Si 0.778 3.222 4 C -0.040 4.040 5 C -0.136 4.136 6 C 0.159 3.841 7 O -0.494 6.494 8 C -0.181 4.181 9 C 0.560 3.440 10 O -0.559 6.559 11 N -0.695 5.695 12 C 0.116 3.884 13 H 0.086 0.914 14 C -0.145 4.145 15 C -0.062 4.062 16 H 0.121 0.879 17 C -0.069 4.069 18 C -0.102 4.102 19 C -0.114 4.114 20 C -0.108 4.108 21 C -0.103 4.103 22 Br -0.063 7.063 23 C -0.099 4.099 24 C -0.124 4.124 25 C -0.052 4.052 26 C -0.153 4.153 27 H 0.406 0.594 28 H 0.096 0.904 29 H -0.286 1.286 30 H -0.283 1.283 31 H 0.145 0.855 32 H 0.409 0.591 33 H 0.414 0.586 34 H 0.092 0.908 35 H 0.068 0.932 36 H 0.152 0.848 37 H 0.153 0.847 38 H 0.137 0.863 39 H 0.134 0.866 40 H 0.093 0.907 41 H 0.098 0.902 42 H 0.167 0.833 43 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.867 9.506 -4.060 10.373 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.200 4.200 3 Si 0.682 3.318 4 C -0.041 4.041 5 C -0.154 4.154 6 C 0.112 3.888 7 O -0.307 6.307 8 C -0.184 4.184 9 C 0.349 3.651 10 O -0.438 6.438 11 N -0.348 5.348 12 C 0.010 3.990 13 H 0.104 0.896 14 C -0.184 4.184 15 C -0.081 4.081 16 H 0.139 0.861 17 C -0.070 4.070 18 C -0.120 4.120 19 C -0.132 4.132 20 C -0.127 4.127 21 C -0.182 4.182 22 Br 0.023 6.977 23 C -0.118 4.118 24 C -0.162 4.162 25 C -0.071 4.071 26 C -0.171 4.171 27 H 0.257 0.743 28 H 0.114 0.886 29 H -0.213 1.213 30 H -0.210 1.210 31 H 0.163 0.837 32 H 0.269 0.731 33 H 0.252 0.748 34 H 0.111 0.889 35 H 0.086 0.914 36 H 0.170 0.830 37 H 0.170 0.830 38 H 0.155 0.845 39 H 0.151 0.849 40 H 0.112 0.888 41 H 0.117 0.883 42 H 0.184 0.816 43 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 0.154 8.286 -2.827 8.756 hybrid contribution -0.246 -0.367 0.326 0.549 sum -0.092 7.919 -2.501 8.305 Atomic orbital electron populations 1.86437 1.16808 1.82579 1.51493 1.25031 0.86299 1.11948 0.96736 0.93990 0.77644 0.74875 0.85281 1.19854 0.95356 0.93455 0.95419 1.21412 1.01102 0.94308 0.98612 1.18756 0.94248 0.83399 0.92383 1.84708 1.47205 1.18492 1.80293 1.20428 1.06621 0.95147 0.96233 1.18200 0.77820 0.86233 0.82886 1.90811 1.58392 1.16323 1.78229 1.45439 1.55515 1.13526 1.20300 1.21856 0.95010 0.96944 0.85173 0.89585 1.23564 0.95605 0.97737 1.01493 1.21623 0.92557 0.98750 0.95128 0.86135 1.19831 0.97367 0.93425 0.96365 1.21542 0.94485 0.98109 0.97862 1.21495 0.98413 0.98635 0.94695 1.21358 0.98940 0.92153 1.00291 1.21939 1.02481 0.94460 0.99328 1.96762 1.96883 1.40042 1.64029 1.21082 0.97053 0.99680 0.94012 1.23378 0.95342 1.00228 0.97222 1.21396 0.96447 0.91804 0.97430 1.21065 1.01071 1.00070 0.94851 0.74262 0.88637 1.21306 1.20984 0.83696 0.73062 0.74786 0.88917 0.91360 0.83021 0.82972 0.84487 0.84855 0.88849 0.88324 0.81590 0.84490 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.55 12.81 -148.98 -1.91 -0.35 16 2 C -0.09 0.30 2.78 71.24 0.20 0.50 16 3 Si 0.78 -4.58 29.83 68.60 2.05 -2.53 16 4 C -0.04 -0.09 5.39 -19.83 -0.11 -0.19 16 5 C -0.14 -0.59 9.60 22.34 0.21 -0.38 16 6 C 0.16 1.11 6.72 22.84 0.15 1.26 16 7 O -0.49 -4.34 11.58 -68.85 -0.80 -5.14 16 8 C -0.18 -0.86 5.89 -20.01 -0.12 -0.98 16 9 C 0.56 3.82 7.76 86.70 0.67 4.49 16 10 O -0.56 -8.41 14.76 16.94 0.25 -8.16 16 11 N -0.70 0.58 5.21 -443.21 -2.31 -1.73 16 12 C 0.12 -0.06 4.32 45.52 0.20 0.14 16 13 H 0.09 0.38 7.46 -2.39 -0.02 0.36 16 14 C -0.15 0.19 7.25 31.12 0.23 0.42 16 15 C -0.06 0.33 3.86 -11.01 -0.04 0.29 16 16 H 0.12 -1.10 8.10 -2.39 -0.02 -1.12 16 17 C -0.07 0.15 5.29 -19.87 -0.11 0.04 16 18 C -0.10 0.37 9.71 22.27 0.22 0.58 16 19 C -0.11 0.29 10.05 22.27 0.22 0.51 16 20 C -0.11 -0.07 9.79 22.28 0.22 0.14 16 21 C -0.10 -0.29 6.22 22.31 0.14 -0.15 16 22 Br -0.06 -0.26 33.70 -20.37 -0.69 -0.94 16 23 C -0.10 -0.09 8.34 22.29 0.19 0.09 16 24 C -0.12 0.63 7.29 31.12 0.23 0.86 16 25 C -0.05 0.04 9.54 22.52 0.21 0.26 16 26 C -0.15 -0.10 8.64 22.24 0.19 0.10 16 27 H 0.41 -5.33 8.74 -74.06 -0.65 -5.98 16 28 H 0.10 -0.63 7.96 -2.39 -0.02 -0.65 16 29 H -0.29 -0.08 7.04 99.48 0.70 0.62 16 30 H -0.28 0.26 7.11 99.48 0.71 0.96 16 31 H 0.15 0.40 8.06 -2.91 -0.02 0.37 16 32 H 0.41 0.73 9.06 -74.06 -0.67 0.05 16 33 H 0.41 -3.08 6.73 -92.71 -0.62 -3.70 16 34 H 0.09 -0.05 6.32 -2.38 -0.02 -0.07 16 35 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 36 H 0.15 -1.31 8.05 -2.91 -0.02 -1.34 16 37 H 0.15 -1.07 8.06 -2.91 -0.02 -1.09 16 38 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 39 H 0.13 0.01 6.67 -2.91 -0.02 -0.01 16 40 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 41 H 0.10 -0.42 7.71 -2.39 -0.02 -0.44 16 42 H 0.17 -1.46 6.40 -2.91 -0.02 -1.47 16 43 H 0.14 -0.25 4.83 -2.91 -0.01 -0.27 16 Total: 0.00 -24.19 378.99 -1.31 -25.50 By element: Atomic # 1 Polarization: -13.82 SS G_CDS: -0.81 Total: -14.63 kcal Atomic # 6 Polarization: 5.08 SS G_CDS: 2.91 Total: 7.98 kcal Atomic # 7 Polarization: 0.58 SS G_CDS: -2.31 Total: -1.73 kcal Atomic # 8 Polarization: -11.19 SS G_CDS: -2.45 Total: -13.65 kcal Atomic # 14 Polarization: -4.58 SS G_CDS: 2.05 Total: -2.53 kcal Atomic # 35 Polarization: -0.26 SS G_CDS: -0.69 Total: -0.94 kcal Total: -24.19 -1.31 -25.50 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.110 kcal (2) G-P(sol) polarization free energy of solvation -24.188 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.078 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.496 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds