Wall clock time and date at job start Sun Mar 7 2021 01:40:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.37788 * 119.85147 * 2 1 4 4 C 1.39714 * 119.90792 * 180.02562 * 3 2 1 5 5 C 1.47533 * 120.19177 * 179.97438 * 4 3 2 6 6 O 1.21589 * 119.99944 * 179.97438 * 5 4 3 7 7 N 1.34776 * 119.99871 * 0.02562 * 5 4 3 8 8 C 1.46503 * 119.99784 * 179.97438 * 7 5 4 9 9 H 1.08999 * 112.90845 * 23.74937 * 8 7 5 10 10 C 1.53787 * 113.61181 * 154.99519 * 8 7 5 11 11 C 1.53784 * 87.07923 * 89.11654 * 10 8 7 12 12 H 1.09000 * 113.61578 * 270.88484 * 11 10 8 13 13 C 1.50701 * 113.61605 * 139.97671 * 11 10 8 14 14 C 1.38195 * 119.99261 * 119.99376 * 13 11 10 15 15 C 1.38347 * 119.99084 * 179.97438 * 14 13 11 16 16 Br 1.89099 * 120.01235 * 179.97438 * 15 14 13 17 17 C 1.38307 * 119.97769 * 0.02562 * 15 14 13 18 18 C 1.38236 * 119.98878 * 359.97438 * 17 15 14 19 19 C 1.38221 * 120.00980 * 359.72437 * 18 17 15 20 20 C 1.53778 * 113.61472 * 252.49040 * 8 7 5 21 21 C 1.40137 * 119.61702 * 0.25175 * 4 3 2 22 22 O 1.35656 * 120.14845 * 179.72304 * 21 4 3 23 23 C 1.38707 * 119.69816 * 359.49524 * 21 4 3 24 24 C 1.50701 * 119.95744 * 180.27228 * 23 21 4 25 25 O 1.42899 * 109.47278 * 285.23416 * 24 23 21 26 26 Si 1.86301 * 109.47069 * 165.23261 * 24 23 21 27 27 C 1.38050 * 120.08699 * 0.50615 * 23 21 4 28 28 H 1.09011 * 109.46999 * 89.99889 * 1 2 3 29 29 H 1.08997 * 109.47465 * 209.99907 * 1 2 3 30 30 H 1.09003 * 109.46974 * 330.00581 * 1 2 3 31 31 H 1.07999 * 120.04583 * 359.97438 * 3 2 1 32 32 H 0.96997 * 120.00437 * 359.97438 * 7 5 4 33 33 H 1.09004 * 113.61202 * 203.66406 * 10 8 7 34 34 H 1.08994 * 113.61447 * 334.56838 * 10 8 7 35 35 H 1.08003 * 120.00566 * 359.97438 * 14 13 11 36 36 H 1.08002 * 120.00393 * 179.97438 * 17 15 14 37 37 H 1.08005 * 119.99119 * 180.02562 * 18 17 15 38 38 H 1.08005 * 119.98932 * 180.27171 * 19 18 17 39 39 H 1.08999 * 113.61111 * 25.43782 * 20 8 7 40 40 H 1.09004 * 113.61682 * 156.33179 * 20 8 7 41 41 H 0.96692 * 113.99865 * 90.00505 * 22 21 4 42 42 H 1.08999 * 109.47115 * 45.23921 * 24 23 21 43 43 H 0.96698 * 113.99640 * 299.99479 * 25 24 23 44 44 H 1.48506 * 110.00112 * 58.68448 * 26 24 23 45 45 H 1.48506 * 109.99857 * 179.97438 * 26 24 23 46 46 H 1.08000 * 119.80868 * 179.76250 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5899 1.1964 -0.0005 5 6 4.3306 2.4724 -0.0011 6 8 5.5465 2.4695 -0.0011 7 7 3.6594 3.6411 -0.0006 8 6 4.3950 4.9081 -0.0006 9 1 5.4026 4.8138 -0.4054 10 6 3.5996 6.0821 -0.5957 11 6 3.0609 6.3335 0.8227 12 1 2.1490 5.7804 1.0478 13 6 2.9652 7.7938 1.1822 14 6 1.7422 8.3447 1.5145 15 6 1.6544 9.6853 1.8451 16 35 -0.0189 10.4399 2.2993 17 6 2.7908 10.4736 1.8421 18 6 4.0138 9.9216 1.5095 19 6 4.1019 8.5808 1.1854 20 6 4.3381 5.6534 1.3433 21 6 4.2837 -0.0211 -0.0064 22 8 5.6401 -0.0324 -0.0127 23 6 3.5770 -1.2147 -0.0011 24 6 4.3172 -2.5274 -0.0011 25 8 4.8544 -2.7713 -1.3027 26 14 3.1445 -3.9016 0.4542 27 6 2.1966 -1.2017 -0.0005 28 1 -0.3633 0.0000 -1.0278 29 1 -0.3634 -0.8899 0.5138 30 1 -0.3633 0.8901 0.5138 31 1 1.6511 2.1294 -0.0004 32 1 2.6895 3.6435 -0.0002 33 1 4.2282 6.8886 -0.9732 34 1 2.8323 5.7742 -1.3059 35 1 0.8549 7.7289 1.5163 36 1 2.7227 11.5202 2.0997 37 1 4.9013 10.5371 1.5076 38 1 5.0583 8.1489 0.9298 39 1 4.1671 4.9994 2.1983 40 1 5.1687 6.3427 1.4959 41 1 6.0374 -0.0377 0.8688 42 1 5.1288 -2.4870 0.7253 43 1 4.1870 -2.8201 -2.0007 44 1 2.0162 -3.9470 -0.5104 45 1 3.8622 -5.2017 0.4571 46 1 1.6509 -2.1337 -0.0002 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:40:04 Heat of formation + Delta-G solvation = -24.091344 kcal Electronic energy + Delta-G solvation = -30528.118057 eV Core-core repulsion = 26203.476190 eV Total energy + Delta-G solvation = -4324.641867 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 2.76 seconds Orbital eigenvalues (eV) -41.96063 -41.29419 -40.03401 -38.78207 -38.02117 -37.66054 -34.76554 -33.32563 -33.14223 -32.82109 -31.85180 -30.14619 -27.71750 -26.88804 -26.86631 -26.62051 -24.97881 -23.61906 -22.65194 -22.04328 -21.60424 -20.19766 -19.58135 -18.60928 -18.13521 -17.87746 -17.43970 -16.93682 -16.79724 -16.42176 -16.28934 -16.05183 -15.87983 -15.70219 -15.26998 -15.13509 -14.92749 -14.69862 -14.63446 -14.56084 -14.39441 -14.23875 -13.67106 -13.65056 -13.53172 -13.39997 -13.09738 -12.99803 -12.64385 -12.43175 -12.26345 -12.06783 -12.04530 -11.80571 -11.71925 -11.61588 -11.42314 -11.19497 -10.91703 -10.51197 -10.25022 -10.07124 -9.92582 -9.66618 -9.57174 -5.05308 -0.38181 0.01197 0.03040 0.19631 0.62969 1.18054 1.47991 1.72708 1.87981 1.99449 2.48460 2.54058 3.14091 3.27359 3.30617 3.43941 3.47286 3.51843 3.57936 3.61502 3.73354 3.81889 3.93497 3.98510 4.00759 4.04861 4.17015 4.22556 4.31620 4.40087 4.49363 4.51401 4.53819 4.55173 4.59136 4.65946 4.72944 4.80455 4.84875 4.86762 4.87902 4.92303 4.98355 5.12945 5.14095 5.26321 5.26565 5.39549 5.51523 5.54476 5.72894 6.40198 6.40419 6.74387 7.19218 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.165 4.165 5 C 0.563 3.437 6 O -0.514 6.514 7 N -0.712 5.712 8 C 0.121 3.879 9 H 0.108 0.892 10 C -0.135 4.135 11 C -0.074 4.074 12 H 0.099 0.901 13 C -0.065 4.065 14 C -0.088 4.088 15 C -0.088 4.088 16 Br -0.050 7.050 17 C -0.095 4.095 18 C -0.109 4.109 19 C -0.102 4.102 20 C -0.143 4.143 21 C 0.192 3.808 22 O -0.467 6.467 23 C -0.151 4.151 24 C -0.066 4.066 25 O -0.519 6.519 26 Si 0.688 3.312 27 C -0.081 4.081 28 H 0.074 0.926 29 H 0.072 0.928 30 H 0.071 0.929 31 H 0.130 0.870 32 H 0.399 0.601 33 H 0.100 0.900 34 H 0.078 0.922 35 H 0.131 0.869 36 H 0.133 0.867 37 H 0.133 0.867 38 H 0.131 0.869 39 H 0.076 0.924 40 H 0.097 0.903 41 H 0.395 0.605 42 H 0.116 0.884 43 H 0.374 0.626 44 H -0.259 1.259 45 H -0.255 1.255 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.653 0.213 2.588 5.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.169 4.169 5 C 0.350 3.650 6 O -0.390 6.390 7 N -0.365 5.365 8 C 0.016 3.984 9 H 0.126 0.874 10 C -0.173 4.173 11 C -0.092 4.092 12 H 0.117 0.883 13 C -0.066 4.066 14 C -0.108 4.108 15 C -0.167 4.167 16 Br 0.036 6.964 17 C -0.115 4.115 18 C -0.128 4.128 19 C -0.120 4.120 20 C -0.182 4.182 21 C 0.145 3.855 22 O -0.278 6.278 23 C -0.152 4.152 24 C -0.175 4.175 25 O -0.325 6.325 26 Si 0.589 3.411 27 C -0.099 4.099 28 H 0.093 0.907 29 H 0.091 0.909 30 H 0.090 0.910 31 H 0.148 0.852 32 H 0.235 0.765 33 H 0.118 0.882 34 H 0.097 0.903 35 H 0.149 0.851 36 H 0.150 0.850 37 H 0.151 0.849 38 H 0.148 0.852 39 H 0.095 0.905 40 H 0.115 0.885 41 H 0.253 0.747 42 H 0.134 0.866 43 H 0.221 0.779 44 H -0.184 1.184 45 H -0.179 1.179 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -4.251 -0.250 2.237 4.810 hybrid contribution -0.074 0.300 -0.780 0.839 sum -4.324 0.050 1.457 4.564 Atomic orbital electron populations 1.20840 0.90021 1.03572 1.02952 1.19789 0.96758 0.92258 1.00881 1.21124 0.92124 0.98284 0.97028 1.20364 0.93917 0.93403 1.09167 1.18021 0.87311 0.83235 0.76419 1.90843 1.12979 1.87182 1.47946 1.45576 1.09960 1.04907 1.76021 1.21834 0.97384 0.82276 0.96932 0.87425 1.23443 1.00137 0.97893 0.95874 1.21618 0.99186 0.91492 0.96930 0.88283 1.19679 0.92671 0.95360 0.98875 1.21014 0.98149 0.93138 0.98476 1.21842 0.92211 0.95947 1.06702 1.96783 1.23606 1.83830 1.92220 1.21177 0.91406 1.00063 0.98856 1.21205 0.97448 0.95309 0.98860 1.21186 0.98513 0.93694 0.98619 1.23581 0.97426 0.99182 0.97984 1.18221 0.83967 0.89649 0.93652 1.84807 1.13996 1.95862 1.33132 1.20655 0.93975 0.95766 1.04771 1.24908 1.05093 0.98820 0.88718 1.86684 1.36471 1.93237 1.16071 0.95140 0.77922 0.77698 0.90299 1.21181 0.92913 0.98570 0.97197 0.90717 0.90874 0.90980 0.85184 0.76547 0.88170 0.90338 0.85093 0.84954 0.84900 0.85150 0.90515 0.88495 0.74689 0.86565 0.77912 1.18381 1.17943 0.84613 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.45 10.00 36.00 0.36 0.81 16 2 C -0.10 0.18 5.87 -104.67 -0.61 -0.44 16 3 C -0.07 0.11 9.18 -39.20 -0.36 -0.25 16 4 C -0.16 -0.17 5.89 -104.84 -0.62 -0.78 16 5 C 0.56 1.24 7.76 -12.47 -0.10 1.14 16 6 O -0.51 -3.04 14.76 -16.59 -0.24 -3.28 16 7 N -0.71 0.72 5.21 -54.06 -0.28 0.43 16 8 C 0.12 -0.14 4.32 -67.12 -0.29 -0.43 16 9 H 0.11 0.08 7.47 -51.93 -0.39 -0.31 16 10 C -0.14 0.36 7.29 -25.91 -0.19 0.17 16 11 C -0.07 0.19 3.86 -90.96 -0.35 -0.16 16 12 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 13 C -0.06 0.07 5.29 -104.63 -0.55 -0.48 16 14 C -0.09 0.02 9.45 -39.56 -0.37 -0.36 16 15 C -0.09 -0.06 6.22 -39.52 -0.25 -0.31 16 16 Br -0.05 -0.05 33.70 -68.01 -2.29 -2.34 16 17 C -0.10 0.00 9.79 -39.56 -0.39 -0.39 16 18 C -0.11 0.10 10.05 -39.59 -0.40 -0.29 16 19 C -0.10 0.13 8.63 -39.58 -0.34 -0.21 16 20 C -0.14 0.27 7.25 -25.92 -0.19 0.08 16 21 C 0.19 0.36 6.69 -38.70 -0.26 0.10 16 22 O -0.47 -1.48 10.91 -40.55 -0.44 -1.92 16 23 C -0.15 -0.02 5.27 -104.52 -0.55 -0.57 16 24 C -0.07 0.00 2.37 36.01 0.09 0.09 16 25 O -0.52 -1.18 12.88 -35.23 -0.45 -1.63 16 26 Si 0.69 -1.06 30.24 -169.99 -5.14 -6.20 16 27 C -0.08 0.11 8.30 -39.53 -0.33 -0.22 16 28 H 0.07 -0.29 8.14 -51.92 -0.42 -0.71 16 29 H 0.07 -0.32 8.08 -51.93 -0.42 -0.74 16 30 H 0.07 -0.34 8.08 -51.93 -0.42 -0.76 16 31 H 0.13 -0.56 6.40 -52.49 -0.34 -0.90 16 32 H 0.40 -1.42 6.73 -40.82 -0.27 -1.69 16 33 H 0.10 -0.28 7.73 -51.93 -0.40 -0.68 16 34 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.13 -0.17 8.06 -52.48 -0.42 -0.60 16 36 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 37 H 0.13 -0.37 8.06 -52.48 -0.42 -0.79 16 38 H 0.13 -0.37 6.64 -52.48 -0.35 -0.72 16 39 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 40 H 0.10 -0.22 6.29 -51.93 -0.33 -0.55 16 41 H 0.39 -0.22 9.06 45.56 0.41 0.20 16 42 H 0.12 -0.08 7.83 -51.93 -0.41 -0.49 16 43 H 0.37 -0.27 8.70 45.56 0.40 0.13 16 44 H -0.26 0.05 6.68 56.52 0.38 0.43 16 45 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 46 H 0.14 -0.37 4.83 -52.49 -0.25 -0.62 16 LS Contribution 399.53 15.07 6.02 6.02 Total: 0.00 -9.35 399.53 -13.48 -22.83 By element: Atomic # 1 Polarization: -6.44 SS G_CDS: -4.94 Total: -11.38 kcal Atomic # 6 Polarization: 3.18 SS G_CDS: -5.70 Total: -2.51 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -0.28 Total: 0.43 kcal Atomic # 8 Polarization: -5.70 SS G_CDS: -1.14 Total: -6.84 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.14 Total: -6.20 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.29 Total: -2.34 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -9.35 -13.48 -22.83 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.261 kcal (2) G-P(sol) polarization free energy of solvation -9.354 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.477 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.831 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.091 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.76 seconds