Wall clock time and date at job start Sun Mar 7 2021 01:40:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.37788 * 119.85147 * 2 1 4 4 C 1.39714 * 119.90792 * 180.02562 * 3 2 1 5 5 C 1.47533 * 120.19177 * 179.97438 * 4 3 2 6 6 O 1.21589 * 119.99944 * 179.97438 * 5 4 3 7 7 N 1.34776 * 119.99871 * 0.02562 * 5 4 3 8 8 C 1.46503 * 119.99784 * 179.97438 * 7 5 4 9 9 H 1.08999 * 112.90845 * 23.74937 * 8 7 5 10 10 C 1.53787 * 113.61181 * 154.99519 * 8 7 5 11 11 C 1.53784 * 87.07923 * 89.11654 * 10 8 7 12 12 H 1.09000 * 113.61578 * 270.88484 * 11 10 8 13 13 C 1.50701 * 113.61605 * 139.97671 * 11 10 8 14 14 C 1.38195 * 119.99261 * 119.99376 * 13 11 10 15 15 C 1.38347 * 119.99084 * 179.97438 * 14 13 11 16 16 Br 1.89099 * 120.01235 * 179.97438 * 15 14 13 17 17 C 1.38307 * 119.97769 * 0.02562 * 15 14 13 18 18 C 1.38236 * 119.98878 * 359.97438 * 17 15 14 19 19 C 1.38221 * 120.00980 * 359.72437 * 18 17 15 20 20 C 1.53778 * 113.61472 * 252.49040 * 8 7 5 21 21 C 1.40137 * 119.61702 * 0.25175 * 4 3 2 22 22 O 1.35656 * 120.14845 * 179.72304 * 21 4 3 23 23 C 1.38707 * 119.69816 * 359.49524 * 21 4 3 24 24 C 1.50701 * 119.95744 * 180.27228 * 23 21 4 25 25 O 1.42899 * 109.47278 * 285.23416 * 24 23 21 26 26 Si 1.86301 * 109.47069 * 165.23261 * 24 23 21 27 27 C 1.38050 * 120.08699 * 0.50615 * 23 21 4 28 28 H 1.09011 * 109.46999 * 89.99889 * 1 2 3 29 29 H 1.08997 * 109.47465 * 209.99907 * 1 2 3 30 30 H 1.09003 * 109.46974 * 330.00581 * 1 2 3 31 31 H 1.07999 * 120.04583 * 359.97438 * 3 2 1 32 32 H 0.96997 * 120.00437 * 359.97438 * 7 5 4 33 33 H 1.09004 * 113.61202 * 203.66406 * 10 8 7 34 34 H 1.08994 * 113.61447 * 334.56838 * 10 8 7 35 35 H 1.08003 * 120.00566 * 359.97438 * 14 13 11 36 36 H 1.08002 * 120.00393 * 179.97438 * 17 15 14 37 37 H 1.08005 * 119.99119 * 180.02562 * 18 17 15 38 38 H 1.08005 * 119.98932 * 180.27171 * 19 18 17 39 39 H 1.08999 * 113.61111 * 25.43782 * 20 8 7 40 40 H 1.09004 * 113.61682 * 156.33179 * 20 8 7 41 41 H 0.96692 * 113.99865 * 90.00505 * 22 21 4 42 42 H 1.08999 * 109.47115 * 45.23921 * 24 23 21 43 43 H 0.96698 * 113.99640 * 299.99479 * 25 24 23 44 44 H 1.48506 * 110.00112 * 58.68448 * 26 24 23 45 45 H 1.48506 * 109.99857 * 179.97438 * 26 24 23 46 46 H 1.08000 * 119.80868 * 179.76250 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5899 1.1964 -0.0005 5 6 4.3306 2.4724 -0.0011 6 8 5.5465 2.4695 -0.0011 7 7 3.6594 3.6411 -0.0006 8 6 4.3950 4.9081 -0.0006 9 1 5.4026 4.8138 -0.4054 10 6 3.5996 6.0821 -0.5957 11 6 3.0609 6.3335 0.8227 12 1 2.1490 5.7804 1.0478 13 6 2.9652 7.7938 1.1822 14 6 1.7422 8.3447 1.5145 15 6 1.6544 9.6853 1.8451 16 35 -0.0189 10.4399 2.2993 17 6 2.7908 10.4736 1.8421 18 6 4.0138 9.9216 1.5095 19 6 4.1019 8.5808 1.1854 20 6 4.3381 5.6534 1.3433 21 6 4.2837 -0.0211 -0.0064 22 8 5.6401 -0.0324 -0.0127 23 6 3.5770 -1.2147 -0.0011 24 6 4.3172 -2.5274 -0.0011 25 8 4.8544 -2.7713 -1.3027 26 14 3.1445 -3.9016 0.4542 27 6 2.1966 -1.2017 -0.0005 28 1 -0.3633 0.0000 -1.0278 29 1 -0.3634 -0.8899 0.5138 30 1 -0.3633 0.8901 0.5138 31 1 1.6511 2.1294 -0.0004 32 1 2.6895 3.6435 -0.0002 33 1 4.2282 6.8886 -0.9732 34 1 2.8323 5.7742 -1.3059 35 1 0.8549 7.7289 1.5163 36 1 2.7227 11.5202 2.0997 37 1 4.9013 10.5371 1.5076 38 1 5.0583 8.1489 0.9298 39 1 4.1671 4.9994 2.1983 40 1 5.1687 6.3427 1.4959 41 1 6.0374 -0.0377 0.8688 42 1 5.1288 -2.4870 0.7253 43 1 4.1870 -2.8201 -2.0007 44 1 2.0162 -3.9470 -0.5104 45 1 3.8622 -5.2017 0.4571 46 1 1.6509 -2.1337 -0.0002 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:40:02 Heat of formation + Delta-G solvation = -21.775902 kcal Electronic energy + Delta-G solvation = -30528.017652 eV Core-core repulsion = 26203.476190 eV Total energy + Delta-G solvation = -4324.541461 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -41.94351 -41.21146 -40.03728 -38.77643 -38.02926 -37.75074 -34.81662 -33.28739 -33.04930 -32.74626 -31.77803 -30.10253 -27.54110 -26.83881 -26.71082 -26.54013 -24.94943 -23.52320 -22.58024 -21.97311 -21.62579 -20.12524 -19.60727 -18.59460 -18.10344 -17.84818 -17.43806 -16.85573 -16.78919 -16.37099 -16.20965 -16.05120 -15.91881 -15.71905 -15.24825 -15.08300 -14.89743 -14.61978 -14.50452 -14.40920 -14.30838 -14.15525 -13.58538 -13.51315 -13.41233 -13.34141 -12.91361 -12.87985 -12.52803 -12.33061 -12.25117 -12.01132 -11.92683 -11.82620 -11.71856 -11.54247 -11.36060 -11.16271 -11.03613 -10.54001 -10.26889 -10.01638 -9.84650 -9.60840 -9.50050 -4.95457 -0.35070 0.08021 0.09789 0.28375 0.64331 1.24819 1.54624 1.70064 1.92553 2.02039 2.55124 2.58008 3.17237 3.33985 3.43299 3.51602 3.59253 3.60531 3.70357 3.78070 3.87836 3.95826 4.08932 4.11600 4.12378 4.19068 4.29379 4.37391 4.42143 4.50792 4.62776 4.64195 4.67246 4.76091 4.81350 4.84440 4.89509 4.93798 4.97573 4.98540 5.01246 5.11947 5.19218 5.22375 5.25292 5.36869 5.42901 5.47055 5.62744 5.68519 5.84119 6.44699 6.46032 6.74445 7.15019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.094 4.094 3 C -0.060 4.060 4 C -0.180 4.180 5 C 0.558 3.442 6 O -0.563 6.563 7 N -0.696 5.696 8 C 0.114 3.886 9 H 0.084 0.916 10 C -0.125 4.125 11 C -0.064 4.064 12 H 0.114 0.886 13 C -0.066 4.066 14 C -0.096 4.096 15 C -0.102 4.102 16 Br -0.061 7.061 17 C -0.108 4.108 18 C -0.114 4.114 19 C -0.106 4.106 20 C -0.140 4.140 21 C 0.165 3.835 22 O -0.492 6.492 23 C -0.154 4.154 24 C -0.084 4.084 25 O -0.547 6.547 26 Si 0.783 3.217 27 C -0.080 4.080 28 H 0.079 0.921 29 H 0.082 0.918 30 H 0.085 0.915 31 H 0.160 0.840 32 H 0.413 0.587 33 H 0.103 0.897 34 H 0.087 0.913 35 H 0.140 0.860 36 H 0.136 0.864 37 H 0.149 0.851 38 H 0.145 0.855 39 H 0.069 0.931 40 H 0.100 0.900 41 H 0.402 0.598 42 H 0.114 0.886 43 H 0.383 0.617 44 H -0.268 1.268 45 H -0.305 1.305 46 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.773 0.389 2.684 7.296 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.094 4.094 3 C -0.078 4.078 4 C -0.184 4.184 5 C 0.347 3.653 6 O -0.442 6.442 7 N -0.349 5.349 8 C 0.009 3.991 9 H 0.102 0.898 10 C -0.163 4.163 11 C -0.082 4.082 12 H 0.132 0.868 13 C -0.067 4.067 14 C -0.116 4.116 15 C -0.182 4.182 16 Br 0.025 6.975 17 C -0.128 4.128 18 C -0.133 4.133 19 C -0.124 4.124 20 C -0.178 4.178 21 C 0.119 3.881 22 O -0.304 6.304 23 C -0.155 4.155 24 C -0.192 4.192 25 O -0.355 6.355 26 Si 0.687 3.313 27 C -0.097 4.097 28 H 0.098 0.902 29 H 0.101 0.899 30 H 0.104 0.896 31 H 0.177 0.823 32 H 0.252 0.748 33 H 0.121 0.879 34 H 0.106 0.894 35 H 0.158 0.842 36 H 0.154 0.846 37 H 0.167 0.833 38 H 0.163 0.837 39 H 0.088 0.912 40 H 0.118 0.882 41 H 0.261 0.739 42 H 0.132 0.868 43 H 0.232 0.768 44 H -0.194 1.194 45 H -0.234 1.234 46 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -6.414 -0.021 2.336 6.826 hybrid contribution 0.630 0.242 -0.814 1.057 sum -5.784 0.222 1.522 5.985 Atomic orbital electron populations 1.20925 0.88083 1.04838 1.03599 1.20104 0.98057 0.91756 0.99486 1.21426 0.90958 0.99861 0.95596 1.20402 0.95043 0.92493 1.10464 1.18309 0.86896 0.84328 0.75773 1.90813 1.15002 1.87865 1.50511 1.45452 1.10638 1.04179 1.74592 1.21857 0.96738 0.82627 0.97887 0.89760 1.23396 0.99961 0.96889 0.96039 1.21600 0.99320 0.90696 0.96602 0.86826 1.19827 0.92416 0.95988 0.98504 1.21184 0.98904 0.92973 0.98506 1.21963 0.91973 0.96540 1.07689 1.96759 1.24344 1.84054 1.92363 1.21346 0.91724 1.00445 0.99272 1.21453 0.97689 0.95760 0.98389 1.21438 0.99200 0.93688 0.98080 1.23557 0.98107 0.99008 0.97141 1.18546 0.83540 0.90809 0.95232 1.84765 1.15341 1.96060 1.34233 1.20644 0.94600 0.95044 1.05216 1.25300 1.05950 1.00089 0.87843 1.86640 1.37994 1.93497 1.17357 0.94089 0.75508 0.73187 0.88491 1.21411 0.92237 0.99743 0.96348 0.90229 0.89910 0.89565 0.82287 0.74826 0.87895 0.89394 0.84178 0.84562 0.83291 0.83733 0.91188 0.88177 0.73851 0.86770 0.76813 1.19362 1.23375 0.82951 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.23 10.00 71.23 0.71 1.94 16 2 C -0.09 0.51 5.87 -19.90 -0.12 0.40 16 3 C -0.06 0.27 9.18 22.52 0.21 0.47 16 4 C -0.18 -0.47 5.89 -20.01 -0.12 -0.59 16 5 C 0.56 3.11 7.76 86.69 0.67 3.79 16 6 O -0.56 -8.10 14.76 16.92 0.25 -7.85 16 7 N -0.70 1.47 5.21 -443.19 -2.31 -0.84 16 8 C 0.11 -0.24 4.32 45.52 0.20 -0.04 16 9 H 0.08 0.27 7.47 -2.39 -0.02 0.25 16 10 C -0.12 0.79 7.29 31.12 0.23 1.01 16 11 C -0.06 0.41 3.86 -11.01 -0.04 0.37 16 12 H 0.11 -1.04 8.10 -2.39 -0.02 -1.06 16 13 C -0.07 0.21 5.29 -19.87 -0.11 0.10 16 14 C -0.10 0.10 9.45 22.29 0.21 0.31 16 15 C -0.10 -0.13 6.22 22.31 0.14 0.00 16 16 Br -0.06 -0.14 33.70 -20.37 -0.69 -0.82 16 17 C -0.11 -0.01 9.79 22.29 0.22 0.21 16 18 C -0.11 0.28 10.05 22.27 0.22 0.50 16 19 C -0.11 0.35 8.63 22.27 0.19 0.54 16 20 C -0.14 0.57 7.25 31.12 0.23 0.79 16 21 C 0.17 0.87 6.69 22.84 0.15 1.02 16 22 O -0.49 -4.53 10.91 -68.79 -0.75 -5.28 16 23 C -0.15 -0.13 5.27 -19.80 -0.10 -0.23 16 24 C -0.08 -0.08 2.37 71.24 0.17 0.09 16 25 O -0.55 -3.35 12.88 -148.98 -1.92 -5.27 16 26 Si 0.78 -2.53 30.24 68.60 2.07 -0.46 16 27 C -0.08 0.29 8.30 22.30 0.19 0.48 16 28 H 0.08 -0.84 8.14 -2.38 -0.02 -0.86 16 29 H 0.08 -0.97 8.08 -2.39 -0.02 -0.99 16 30 H 0.09 -1.10 8.08 -2.39 -0.02 -1.12 16 31 H 0.16 -1.79 6.40 -2.91 -0.02 -1.81 16 32 H 0.41 -3.54 6.73 -92.71 -0.62 -4.16 16 33 H 0.10 -0.66 7.73 -2.39 -0.02 -0.68 16 34 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 35 H 0.14 -0.51 8.06 -2.91 -0.02 -0.53 16 36 H 0.14 -0.22 8.06 -2.91 -0.02 -0.25 16 37 H 0.15 -0.95 8.06 -2.91 -0.02 -0.97 16 38 H 0.15 -0.96 6.64 -2.91 -0.02 -0.98 16 39 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 40 H 0.10 -0.47 6.29 -2.38 -0.02 -0.49 16 41 H 0.40 0.94 9.06 -74.06 -0.67 0.27 16 42 H 0.11 0.05 7.83 -2.39 -0.02 0.03 16 43 H 0.38 -0.08 8.70 -74.06 -0.64 -0.72 16 44 H -0.27 0.49 6.68 99.48 0.66 1.15 16 45 H -0.31 -1.60 7.11 99.48 0.71 -0.90 16 46 H 0.15 -1.13 4.83 -2.91 -0.01 -1.14 16 Total: 0.00 -24.19 399.53 -0.97 -25.16 By element: Atomic # 1 Polarization: -14.95 SS G_CDS: -0.88 Total: -15.82 kcal Atomic # 6 Polarization: 7.93 SS G_CDS: 3.25 Total: 11.17 kcal Atomic # 7 Polarization: 1.47 SS G_CDS: -2.31 Total: -0.84 kcal Atomic # 8 Polarization: -15.98 SS G_CDS: -2.42 Total: -18.40 kcal Atomic # 14 Polarization: -2.53 SS G_CDS: 2.07 Total: -0.46 kcal Atomic # 35 Polarization: -0.14 SS G_CDS: -0.69 Total: -0.82 kcal Total: -24.19 -0.97 -25.16 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.389 kcal (2) G-P(sol) polarization free energy of solvation -24.193 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.804 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.972 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.165 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.776 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds