Wall clock time and date at job start Sun Mar 7 2021 01:40:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35989 * 117.00593 * 2 1 4 4 C 1.38561 * 120.06113 * 0.02562 * 3 2 1 5 5 C 1.38278 * 120.01542 * 179.97438 * 4 3 2 6 6 C 1.50703 * 119.92089 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47055 * 300.00204 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 180.02562 * 6 5 4 9 9 C 1.38212 * 120.15793 * 0.27311 * 5 4 3 10 10 C 1.38379 * 120.12996 * 359.45044 * 9 5 4 11 11 Cl 1.73599 * 120.01233 * 180.27360 * 10 9 5 12 12 C 1.38624 * 119.97817 * 0.54936 * 10 9 5 13 13 O 1.36019 * 120.07878 * 179.74801 * 12 10 9 14 14 C 1.42907 * 116.99852 * 269.97585 * 13 12 10 15 15 C 1.52993 * 109.47394 * 269.99710 * 14 13 12 16 16 C 1.50704 * 109.46821 * 149.99853 * 14 13 12 17 17 O 1.21282 * 119.99924 * 5.00123 * 16 14 13 18 18 N 1.34777 * 119.99814 * 184.99822 * 16 14 13 19 19 C 1.46501 * 119.99720 * 179.97438 * 18 16 14 20 20 H 1.08998 * 112.85461 * 336.19805 * 19 18 16 21 21 C 1.53781 * 113.61169 * 107.50710 * 19 18 16 22 22 C 1.53790 * 87.08150 * 89.11410 * 21 19 18 23 23 H 1.08998 * 113.69112 * 270.87519 * 22 21 19 24 24 C 1.50696 * 113.61172 * 139.98059 * 22 21 19 25 25 C 1.38192 * 119.99827 * 322.22263 * 24 22 21 26 26 C 1.38346 * 119.99046 * 179.76503 * 25 24 22 27 27 Br 1.89105 * 120.01100 * 180.25603 * 26 25 24 28 28 C 1.38310 * 119.98085 * 0.54063 * 26 25 24 29 29 C 1.38237 * 119.98415 * 359.71807 * 28 26 25 30 30 C 1.38216 * 120.01387 * 359.97438 * 29 28 26 31 31 C 1.53783 * 87.07918 * 25.43171 * 22 21 19 32 32 H 1.08999 * 109.46554 * 300.00136 * 1 2 3 33 33 H 1.09003 * 109.46967 * 59.99174 * 1 2 3 34 34 H 1.08995 * 109.47543 * 179.97438 * 1 2 3 35 35 H 1.07997 * 119.99351 * 359.97438 * 4 3 2 36 36 H 1.09002 * 109.47152 * 60.00012 * 6 5 4 37 37 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 38 38 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 39 39 H 1.48494 * 110.00064 * 301.31786 * 8 6 5 40 40 H 1.07994 * 119.93806 * 179.72647 * 9 5 4 41 41 H 1.08993 * 109.47057 * 30.00166 * 14 13 12 42 42 H 1.09003 * 109.47052 * 59.99761 * 15 14 13 43 43 H 1.08996 * 109.47376 * 180.02562 * 15 14 13 44 44 H 1.09006 * 109.47593 * 300.00421 * 15 14 13 45 45 H 0.96999 * 120.00116 * 0.02562 * 18 16 14 46 46 H 1.08994 * 113.61331 * 203.65993 * 21 19 18 47 47 H 1.09000 * 113.61381 * 334.57082 * 21 19 18 48 48 H 1.07997 * 120.00313 * 0.02562 * 25 24 22 49 49 H 1.07994 * 120.00583 * 179.69940 * 28 26 25 50 50 H 1.08006 * 119.99069 * 180.02562 * 29 28 26 51 51 H 1.08002 * 119.98698 * 180.02562 * 30 29 28 52 52 H 1.08997 * 113.61254 * 220.01538 * 31 22 21 53 53 H 1.08997 * 113.68956 * 89.12838 * 31 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2932 2.3746 0.0005 5 6 1.9221 3.6061 0.0011 6 6 1.1007 4.8696 0.0011 7 8 0.2767 4.9020 -1.1660 8 14 2.2349 6.3475 0.0011 9 6 3.3022 3.6810 -0.0046 10 6 4.0606 2.5236 0.0006 11 17 5.7939 2.6212 0.0006 12 6 3.4360 1.2861 0.0000 13 8 4.1795 0.1471 0.0000 14 6 4.5342 -0.3961 -1.2734 15 6 3.4530 -1.3785 -1.7278 16 6 5.8531 -1.1167 -1.1623 17 8 6.3880 -1.2392 -0.0808 18 7 6.4381 -1.6251 -2.2650 19 6 7.7205 -2.3251 -2.1571 20 1 8.2909 -2.0305 -1.2762 21 6 7.6083 -3.8479 -2.3397 22 6 7.8079 -3.6031 -3.8448 23 1 6.8784 -3.4316 -4.3877 24 6 8.6943 -4.6241 -4.5101 25 6 9.7968 -5.1219 -3.8420 26 6 10.6078 -6.0629 -4.4511 27 35 12.1125 -6.7499 -3.5346 28 6 10.3211 -6.4966 -5.7327 29 6 9.2210 -5.9940 -6.4023 30 6 8.4075 -5.0587 -5.7909 31 6 8.5424 -2.3089 -3.4568 32 1 -0.3632 0.5139 0.8900 33 1 -0.3633 0.5140 -0.8899 34 1 -0.3634 -1.0276 -0.0005 35 1 0.2147 2.3192 0.0005 36 1 0.4715 4.8939 0.8908 37 1 0.7709 4.8830 -1.9970 38 1 1.4370 7.6000 0.0004 39 1 3.1195 6.3089 1.1931 40 1 3.7896 4.6446 -0.0087 41 1 4.6211 0.4107 -2.0010 42 1 2.4990 -0.8573 -1.8081 43 1 3.7237 -1.7931 -2.6988 44 1 3.3660 -2.1854 -1.0001 45 1 6.0105 -1.5268 -3.1300 46 1 8.4228 -4.4044 -1.8762 47 1 6.6253 -4.2465 -2.0888 48 1 10.0230 -4.7796 -2.8430 49 1 10.9566 -7.2275 -6.2104 50 1 8.9968 -6.3329 -7.4029 51 1 7.5479 -4.6666 -6.3143 52 1 8.3135 -1.4651 -4.1077 53 1 9.6124 -2.4433 -3.2985 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_13428712.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:40:12 Heat of formation + Delta-G solvation = -49.146605 kcal Electronic energy + Delta-G solvation = -39553.011276 eV Core-core repulsion = 34237.725710 eV Total energy + Delta-G solvation = -5315.285567 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 496.053 amu Computer time = 2.16 seconds Orbital eigenvalues (eV) -42.03191 -41.58240 -40.57256 -39.38429 -39.18063 -38.56811 -37.76616 -36.87864 -34.88466 -33.42544 -32.98317 -31.80400 -31.36389 -31.18255 -30.22883 -28.54061 -26.79000 -26.71213 -26.47370 -25.25365 -23.65817 -23.50002 -22.85152 -22.44575 -21.76799 -20.21355 -19.67381 -18.79821 -18.55197 -18.32005 -17.96761 -17.51857 -17.22358 -16.88542 -16.51457 -16.40057 -16.22540 -16.10436 -16.00551 -15.91225 -15.68132 -15.61234 -15.18413 -14.88029 -14.75583 -14.56117 -14.46201 -14.29080 -14.24744 -13.99835 -13.71257 -13.49136 -13.43552 -13.30817 -13.19098 -12.92553 -12.90707 -12.70878 -12.55734 -12.44028 -12.35142 -12.14549 -12.01394 -11.91414 -11.87790 -11.83325 -11.53901 -11.36145 -11.31628 -11.19245 -10.75148 -10.54298 -10.14690 -9.85833 -9.82556 -9.60669 -9.40778 -5.02869 -0.34280 -0.02475 0.12079 0.28185 0.64687 0.85627 1.24597 1.47124 1.60161 1.64034 1.94300 2.15988 2.22925 2.59048 2.68207 3.34255 3.43738 3.54771 3.55594 3.63624 3.69555 3.75654 3.81999 3.84650 3.85456 3.94649 3.99085 4.03642 4.05174 4.06942 4.24450 4.30565 4.31835 4.36681 4.43135 4.44319 4.57673 4.59891 4.69086 4.71255 4.73184 4.75380 4.75951 4.84004 4.84218 4.96005 4.98918 5.01613 5.08514 5.13037 5.19019 5.23386 5.24235 5.37703 5.49326 5.62067 5.86460 5.92632 6.32502 6.49386 6.74429 7.15901 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.312 6.312 3 C 0.127 3.873 4 C -0.163 4.163 5 C -0.063 4.063 6 C -0.063 4.063 7 O -0.546 6.546 8 Si 0.761 3.239 9 C -0.135 4.135 10 C -0.023 4.023 11 Cl -0.049 7.049 12 C 0.054 3.946 13 O -0.310 6.310 14 C 0.074 3.926 15 C -0.161 4.161 16 C 0.519 3.481 17 O -0.562 6.562 18 N -0.692 5.692 19 C 0.116 3.884 20 H 0.080 0.920 21 C -0.145 4.145 22 C -0.060 4.060 23 H 0.126 0.874 24 C -0.068 4.068 25 C -0.100 4.100 26 C -0.103 4.103 27 Br -0.065 7.065 28 C -0.109 4.109 29 C -0.114 4.114 30 C -0.100 4.100 31 C -0.124 4.124 32 H 0.062 0.938 33 H 0.075 0.925 34 H 0.118 0.882 35 H 0.161 0.839 36 H 0.121 0.879 37 H 0.398 0.602 38 H -0.291 1.291 39 H -0.289 1.289 40 H 0.155 0.845 41 H 0.107 0.893 42 H 0.081 0.919 43 H 0.102 0.898 44 H 0.055 0.945 45 H 0.419 0.581 46 H 0.089 0.911 47 H 0.072 0.928 48 H 0.132 0.868 49 H 0.136 0.864 50 H 0.152 0.848 51 H 0.154 0.846 52 H 0.095 0.905 53 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.064 1.708 -10.309 12.082 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.225 6.225 3 C 0.080 3.920 4 C -0.182 4.182 5 C -0.064 4.064 6 C -0.173 4.173 7 O -0.354 6.354 8 Si 0.667 3.333 9 C -0.154 4.154 10 C -0.051 4.051 11 Cl -0.020 7.020 12 C 0.009 3.991 13 O -0.226 6.226 14 C 0.016 3.984 15 C -0.218 4.218 16 C 0.305 3.695 17 O -0.439 6.439 18 N -0.347 5.347 19 C 0.011 3.989 20 H 0.098 0.902 21 C -0.183 4.183 22 C -0.079 4.079 23 H 0.143 0.857 24 C -0.069 4.069 25 C -0.119 4.119 26 C -0.183 4.183 27 Br 0.021 6.979 28 C -0.128 4.128 29 C -0.133 4.133 30 C -0.118 4.118 31 C -0.162 4.162 32 H 0.081 0.919 33 H 0.094 0.906 34 H 0.136 0.864 35 H 0.178 0.822 36 H 0.138 0.862 37 H 0.249 0.751 38 H -0.218 1.218 39 H -0.216 1.216 40 H 0.173 0.827 41 H 0.125 0.875 42 H 0.100 0.900 43 H 0.120 0.880 44 H 0.074 0.926 45 H 0.257 0.743 46 H 0.107 0.893 47 H 0.091 0.909 48 H 0.150 0.850 49 H 0.154 0.846 50 H 0.170 0.830 51 H 0.172 0.828 52 H 0.113 0.887 53 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -5.026 1.795 -8.175 9.762 hybrid contribution -0.424 -0.301 0.272 0.587 sum -5.449 1.493 -7.903 9.715 Atomic orbital electron populations 1.23454 0.76041 1.05887 1.02691 1.86214 1.23437 1.25165 1.87716 1.19217 0.90440 0.86139 0.96194 1.21295 1.01681 0.90078 1.05147 1.20206 0.92569 0.96108 0.97542 1.25051 0.99535 1.00662 0.92096 1.86492 1.36073 1.96736 1.16112 0.93808 0.78242 0.74107 0.87156 1.20894 0.93029 0.97175 1.04261 1.21088 0.85945 0.93666 1.04354 1.98416 1.08546 1.98463 1.96602 1.17782 0.87338 0.85365 1.08663 1.86258 1.69918 1.38136 1.28311 1.22338 0.92686 0.97598 0.85811 1.22244 0.98194 0.98844 1.02520 1.20606 0.86121 0.78521 0.84275 1.90744 1.65359 1.58758 1.29061 1.45385 1.22357 1.56848 1.10061 1.21821 0.84734 0.92569 0.99815 0.90226 1.23555 1.03091 0.95867 0.95830 1.21634 0.98433 0.93068 0.94715 0.85655 1.19851 0.94934 0.97462 0.94632 1.21082 0.94516 0.95886 1.00451 1.21939 0.96473 1.02652 0.97202 1.96760 1.38476 1.85908 1.76799 1.21353 0.98537 1.00132 0.92813 1.21497 0.93907 0.96785 1.01079 1.21552 0.99991 0.96093 0.94189 1.23369 0.99773 0.97843 0.95237 0.91886 0.90621 0.86383 0.82177 0.86201 0.75146 1.21830 1.21586 0.82743 0.87517 0.89981 0.87979 0.92587 0.74333 0.89293 0.90948 0.85021 0.84608 0.82989 0.82790 0.88669 0.88702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.31 -0.35 8.19 -79.56 -0.65 -1.01 16 3 C 0.13 0.26 6.54 22.57 0.15 0.41 16 4 C -0.16 0.29 8.60 22.36 0.19 0.49 16 5 C -0.06 0.15 5.39 -19.86 -0.11 0.05 16 6 C -0.06 0.27 2.82 71.24 0.20 0.47 16 7 O -0.55 2.72 12.76 -148.98 -1.90 0.82 16 8 Si 0.76 -2.96 29.78 68.60 2.04 -0.92 16 9 C -0.14 0.07 8.45 22.30 0.19 0.26 16 10 C -0.02 -0.09 6.33 22.40 0.14 0.05 16 11 Cl -0.05 -0.30 28.50 -2.72 -0.08 -0.38 16 12 C 0.05 0.30 5.56 22.58 0.13 0.42 16 13 O -0.31 -2.85 8.48 -67.38 -0.57 -3.42 16 14 C 0.07 0.14 3.19 29.85 0.10 0.24 16 15 C -0.16 0.45 9.05 71.98 0.65 1.11 16 16 C 0.52 2.81 7.18 87.66 0.63 3.44 16 17 O -0.56 -9.22 16.11 15.96 0.26 -8.97 16 18 N -0.69 1.90 5.22 -440.02 -2.30 -0.40 16 19 C 0.12 -0.15 4.32 45.52 0.20 0.04 16 20 H 0.08 0.38 7.46 -2.39 -0.02 0.36 16 21 C -0.14 0.36 7.25 31.12 0.23 0.58 16 22 C -0.06 0.40 3.86 -11.01 -0.04 0.36 16 23 H 0.13 -1.39 8.09 -2.39 -0.02 -1.41 16 24 C -0.07 0.21 5.29 -19.87 -0.11 0.10 16 25 C -0.10 -0.05 8.34 22.28 0.19 0.14 16 26 C -0.10 -0.26 6.22 22.31 0.14 -0.12 16 27 Br -0.06 -0.27 33.70 -20.37 -0.69 -0.95 16 28 C -0.11 -0.03 9.79 22.29 0.22 0.19 16 29 C -0.11 0.37 10.05 22.26 0.22 0.59 16 30 C -0.10 0.47 9.71 22.27 0.22 0.68 16 31 C -0.12 0.74 7.29 31.12 0.23 0.96 16 32 H 0.06 -0.44 7.66 -2.39 -0.02 -0.45 16 33 H 0.08 -0.71 7.66 -2.39 -0.02 -0.73 16 34 H 0.12 -1.06 8.14 -2.39 -0.02 -1.07 16 35 H 0.16 -0.83 6.30 -2.91 -0.02 -0.85 16 36 H 0.12 -0.47 7.96 -2.39 -0.02 -0.49 16 37 H 0.40 -5.16 8.70 -74.05 -0.64 -5.80 16 38 H -0.29 -0.90 7.11 99.48 0.71 -0.19 16 39 H -0.29 -0.62 7.11 99.48 0.71 0.09 16 40 H 0.16 -0.57 4.86 -2.91 -0.01 -0.59 16 41 H 0.11 -0.29 7.91 -2.39 -0.02 -0.31 16 42 H 0.08 -0.24 6.28 -2.39 -0.01 -0.26 16 43 H 0.10 -0.97 7.92 -2.39 -0.02 -0.99 16 44 H 0.05 0.09 8.14 -2.38 -0.02 0.07 16 45 H 0.42 -4.30 8.48 -92.71 -0.79 -5.08 16 46 H 0.09 -0.09 6.32 -2.39 -0.02 -0.10 16 47 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 48 H 0.13 0.00 6.67 -2.91 -0.02 -0.02 16 49 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 50 H 0.15 -1.17 8.06 -2.91 -0.02 -1.20 16 51 H 0.15 -1.55 8.05 -2.91 -0.02 -1.57 16 52 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 53 H 0.09 -0.42 7.72 -2.39 -0.02 -0.44 16 Total: 0.00 -26.52 468.76 0.58 -25.94 By element: Atomic # 1 Polarization: -21.81 SS G_CDS: -0.40 Total: -22.21 kcal Atomic # 6 Polarization: 6.62 SS G_CDS: 4.86 Total: 11.49 kcal Atomic # 7 Polarization: 1.90 SS G_CDS: -2.30 Total: -0.40 kcal Atomic # 8 Polarization: -9.71 SS G_CDS: -2.87 Total: -12.57 kcal Atomic # 14 Polarization: -2.96 SS G_CDS: 2.04 Total: -0.92 kcal Atomic # 17 Polarization: -0.30 SS G_CDS: -0.08 Total: -0.38 kcal Atomic # 35 Polarization: -0.27 SS G_CDS: -0.69 Total: -0.95 kcal Total: -26.52 0.58 -25.94 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13428712.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.203 kcal (2) G-P(sol) polarization free energy of solvation -26.523 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.726 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.944 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.16 seconds