Wall clock time and date at job start Sun Mar 7 2021 01:40:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86296 * 109.46874 * 2 1 4 4 C 1.50692 * 109.47522 * 239.99672 * 2 1 3 5 5 C 1.34179 * 125.44150 * 299.98514 * 4 2 1 6 6 C 1.47019 * 105.95831 * 179.79400 * 5 4 2 7 7 C 1.47375 * 127.19624 * 180.25995 * 6 5 4 8 8 O 1.21620 * 119.99590 * 0.18342 * 7 6 5 9 9 N 1.34773 * 120.00313 * 180.17964 * 7 6 5 10 10 C 1.46502 * 120.00177 * 180.02562 * 9 7 6 11 11 H 1.09007 * 112.84977 * 23.80102 * 10 9 7 12 12 C 1.53781 * 113.61823 * 154.99747 * 10 9 7 13 13 C 1.53788 * 87.07896 * 89.11300 * 12 10 9 14 14 H 1.08996 * 113.61381 * 270.80419 * 13 12 10 15 15 C 1.50701 * 113.61045 * 139.98081 * 13 12 10 16 16 C 1.38219 * 119.99155 * 119.99970 * 15 13 12 17 17 C 1.38260 * 120.02027 * 179.97438 * 16 15 13 18 18 C 1.38202 * 120.00971 * 0.05141 * 17 16 15 19 19 C 1.38342 * 119.98810 * 359.97212 * 18 17 16 20 20 Br 1.89100 * 120.00857 * 180.02562 * 19 18 17 21 21 C 1.38237 * 119.99502 * 299.72523 * 15 13 12 22 22 C 1.53775 * 113.61141 * 252.49775 * 10 9 7 23 23 C 1.36416 * 105.61463 * 0.38985 * 6 5 4 24 24 O 1.33657 * 108.39790 * 359.60569 * 23 6 5 25 25 H 0.96689 * 114.00131 * 299.99838 * 1 2 3 26 26 H 1.09004 * 109.47289 * 119.99480 * 2 1 3 27 27 H 1.48500 * 110.00117 * 178.67919 * 3 2 1 28 28 H 1.48502 * 110.00044 * 299.99488 * 3 2 1 29 29 H 1.08002 * 127.01580 * 0.06843 * 5 4 2 30 30 H 0.96997 * 119.99658 * 359.97438 * 9 7 6 31 31 H 1.08989 * 113.61549 * 203.66214 * 12 10 9 32 32 H 1.09006 * 113.61149 * 334.48742 * 12 10 9 33 33 H 1.08005 * 119.99285 * 359.97438 * 16 15 13 34 34 H 1.08002 * 119.99502 * 180.02562 * 17 16 15 35 35 H 1.07999 * 120.00545 * 179.97438 * 18 17 16 36 36 H 1.07999 * 120.00906 * 0.02562 * 21 15 13 37 37 H 1.08999 * 113.61791 * 25.42949 * 22 10 9 38 38 H 1.09002 * 113.61802 * 156.33190 * 22 10 9 39 39 H 1.08002 * 125.80495 * 179.87525 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2303 5 6 1.6758 -1.9883 -1.5498 6 6 2.3647 -2.2316 -2.8256 7 6 2.3879 -3.4847 -3.6008 8 8 1.7877 -4.4617 -3.1954 9 7 3.0742 -3.5481 -4.7590 10 6 3.0968 -4.7937 -5.5299 11 1 2.2406 -5.4357 -5.3222 12 6 3.3604 -4.5849 -7.0305 13 6 4.8587 -4.6980 -6.7027 14 1 5.3238 -3.7449 -6.4512 15 6 5.6427 -5.4803 -7.7247 16 6 6.6841 -4.8783 -8.4055 17 6 7.4041 -5.5956 -9.3428 18 6 7.0821 -6.9147 -9.6002 19 6 6.0396 -7.5175 -8.9194 20 35 5.5991 -9.3227 -9.2705 21 6 5.3239 -6.8016 -7.9769 22 6 4.4470 -5.5276 -5.4751 23 6 2.9806 -1.0557 -3.1404 24 8 2.7068 -0.1661 -2.1812 25 1 -0.3933 0.4416 0.7650 26 1 1.7924 -0.5138 0.8900 27 1 3.5345 1.7704 0.0322 28 1 1.5615 2.4678 -1.2086 29 1 1.0812 -2.6928 -0.9871 30 1 3.5526 -2.7688 -5.0825 31 1 2.9879 -5.3958 -7.6562 32 1 3.0645 -3.6003 -7.3929 33 1 6.9354 -3.8471 -8.2053 34 1 8.2180 -5.1249 -9.8743 35 1 7.6444 -7.4748 -10.3327 36 1 4.5128 -7.2731 -7.4420 37 1 5.0297 -5.3038 -4.5815 38 1 4.3716 -6.5964 -5.6756 39 1 3.5830 -0.8732 -4.0180 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_13456056.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:40:24 Heat of formation + Delta-G solvation = 12.113837 kcal Electronic energy + Delta-G solvation = -24681.418295 eV Core-core repulsion = 20797.647781 eV Total energy + Delta-G solvation = -3883.770514 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.030 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -43.77406 -41.66525 -40.26738 -38.80341 -37.99960 -34.81870 -33.90931 -33.34454 -32.22692 -31.51981 -30.27497 -27.01963 -26.87975 -26.37699 -24.90569 -23.52996 -22.53743 -22.24734 -21.06396 -20.30487 -18.97890 -18.72206 -18.21964 -17.39605 -17.19892 -17.09234 -16.55675 -16.28447 -15.99518 -15.88344 -15.76507 -15.20328 -15.12703 -14.64197 -14.56721 -14.37199 -14.18095 -14.14050 -13.76301 -13.63067 -13.49752 -13.02170 -12.72901 -12.49860 -12.12345 -12.09022 -12.01526 -11.62319 -11.39530 -11.22602 -11.08262 -10.91151 -10.60119 -10.18810 -9.91470 -9.81300 -9.68076 -5.15658 0.03175 0.16573 0.18211 0.63482 0.84181 1.08642 1.49130 1.62037 1.94130 1.94510 2.29351 2.48291 3.17459 3.28105 3.46712 3.47976 3.52413 3.56810 3.69924 3.79511 3.81987 3.92456 4.03172 4.14009 4.15825 4.29983 4.31802 4.45936 4.55186 4.56666 4.58667 4.69887 4.74960 4.81863 4.83235 4.87928 4.98248 5.13421 5.19489 5.24936 5.39329 5.49526 5.72206 5.79655 6.36703 6.41823 7.15300 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.036 4.036 3 Si 0.712 3.288 4 C -0.016 4.016 5 C -0.116 4.116 6 C -0.235 4.235 7 C 0.592 3.408 8 O -0.526 6.526 9 N -0.711 5.711 10 C 0.121 3.879 11 H 0.109 0.891 12 C -0.135 4.135 13 C -0.074 4.074 14 H 0.100 0.900 15 C -0.066 4.066 16 C -0.101 4.101 17 C -0.110 4.110 18 C -0.095 4.095 19 C -0.087 4.087 20 Br -0.048 7.048 21 C -0.089 4.089 22 C -0.145 4.145 23 C 0.030 3.970 24 O -0.173 6.173 25 H 0.392 0.608 26 H 0.096 0.904 27 H -0.252 1.252 28 H -0.250 1.250 29 H 0.165 0.835 30 H 0.398 0.602 31 H 0.100 0.900 32 H 0.079 0.921 33 H 0.128 0.872 34 H 0.133 0.867 35 H 0.133 0.867 36 H 0.134 0.866 37 H 0.077 0.923 38 H 0.097 0.903 39 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.246 5.741 1.488 6.342 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.146 4.146 3 Si 0.611 3.389 4 C -0.064 4.064 5 C -0.136 4.136 6 C -0.239 4.239 7 C 0.380 3.620 8 O -0.402 6.402 9 N -0.363 5.363 10 C 0.016 3.984 11 H 0.127 0.873 12 C -0.173 4.173 13 C -0.092 4.092 14 H 0.118 0.882 15 C -0.067 4.067 16 C -0.119 4.119 17 C -0.129 4.129 18 C -0.115 4.115 19 C -0.166 4.166 20 Br 0.037 6.963 21 C -0.108 4.108 22 C -0.183 4.183 23 C -0.040 4.040 24 O -0.070 6.070 25 H 0.241 0.759 26 H 0.113 0.887 27 H -0.177 1.177 28 H -0.174 1.174 29 H 0.182 0.818 30 H 0.232 0.768 31 H 0.119 0.881 32 H 0.097 0.903 33 H 0.146 0.854 34 H 0.151 0.849 35 H 0.151 0.849 36 H 0.152 0.848 37 H 0.096 0.904 38 H 0.115 0.885 39 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 2.286 4.911 0.701 5.462 hybrid contribution 0.500 -0.033 -0.492 0.703 sum 2.787 4.878 0.209 5.622 Atomic orbital electron populations 1.86461 1.16258 1.82055 1.50257 1.23796 0.86248 1.11764 0.92768 0.95101 0.80818 0.76023 0.86913 1.21168 0.99549 0.92870 0.92791 1.22503 1.00598 0.95488 0.95009 1.21498 1.07628 0.95115 0.99697 1.17215 0.78245 0.86520 0.80019 1.90827 1.43622 1.36874 1.68906 1.45482 1.53255 1.14505 1.23025 1.21856 0.99337 0.86212 0.91020 0.87304 1.23446 0.94498 1.03832 0.95563 1.21626 0.94604 0.98789 0.94185 0.88160 1.19677 0.96219 0.93473 0.97300 1.21216 0.94851 1.00164 0.95716 1.21208 0.99905 0.93809 0.98000 1.21176 0.95870 0.95402 0.99049 1.21834 1.00732 0.92218 1.01855 1.96792 1.93382 1.10994 1.95119 1.20979 0.99430 0.93812 0.96601 1.23590 0.96760 1.00117 0.97843 1.24459 0.99888 0.87208 0.92457 1.83701 1.55034 1.40205 1.28044 0.75922 0.88660 1.17678 1.17413 0.81771 0.76752 0.88139 0.90262 0.85393 0.84950 0.84937 0.84839 0.90438 0.88472 0.76982 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.28 12.84 -35.23 -0.45 -0.17 16 2 C -0.04 0.03 2.97 36.00 0.11 0.13 16 3 Si 0.71 -1.21 32.08 -169.99 -5.45 -6.66 16 4 C -0.02 -0.04 6.24 -35.74 -0.22 -0.26 16 5 C -0.12 -0.38 10.88 -37.45 -0.41 -0.78 16 6 C -0.23 -0.52 6.31 -103.28 -0.65 -1.17 16 7 C 0.59 1.79 7.81 -12.54 -0.10 1.69 16 8 O -0.53 -3.77 16.58 5.26 0.09 -3.68 16 9 N -0.71 0.51 5.25 -54.10 -0.28 0.23 16 10 C 0.12 -0.08 4.32 -67.12 -0.29 -0.37 16 11 H 0.11 0.13 7.46 -51.93 -0.39 -0.25 16 12 C -0.14 0.32 7.29 -25.92 -0.19 0.13 16 13 C -0.07 0.17 3.86 -90.95 -0.35 -0.18 16 14 H 0.10 -0.37 8.09 -51.93 -0.42 -0.79 16 15 C -0.07 0.06 5.29 -104.63 -0.55 -0.50 16 16 C -0.10 0.11 9.71 -39.58 -0.38 -0.27 16 17 C -0.11 0.09 10.05 -39.59 -0.40 -0.31 16 18 C -0.10 -0.02 9.79 -39.56 -0.39 -0.41 16 19 C -0.09 -0.09 6.22 -39.52 -0.25 -0.33 16 20 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 21 C -0.09 -0.01 8.37 -39.55 -0.33 -0.34 16 22 C -0.14 0.18 7.25 -25.92 -0.19 -0.01 16 23 C 0.03 -0.01 11.61 30.08 0.35 0.34 16 24 O -0.17 -0.35 8.89 7.62 0.07 -0.28 16 25 H 0.39 -2.37 8.74 45.56 0.40 -1.97 16 26 H 0.10 -0.28 7.96 -51.93 -0.41 -0.70 16 27 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 28 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 29 H 0.16 0.52 8.06 -52.49 -0.42 0.10 16 30 H 0.40 -1.53 7.67 -40.82 -0.31 -1.85 16 31 H 0.10 -0.22 7.73 -51.94 -0.40 -0.62 16 32 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 33 H 0.13 -0.39 8.05 -52.48 -0.42 -0.81 16 34 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 35 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 36 H 0.13 -0.09 6.64 -52.49 -0.35 -0.44 16 37 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 38 H 0.10 -0.12 6.30 -51.93 -0.33 -0.44 16 39 H 0.21 -1.11 7.47 -52.49 -0.39 -1.50 16 LS Contribution 358.11 15.07 5.40 5.40 Total: 0.00 -10.35 358.11 -11.51 -21.87 By element: Atomic # 1 Polarization: -7.35 SS G_CDS: -4.34 Total: -11.68 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: -4.24 Total: -2.64 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -0.28 Total: 0.23 kcal Atomic # 8 Polarization: -3.84 SS G_CDS: -0.30 Total: -4.13 kcal Atomic # 14 Polarization: -1.21 SS G_CDS: -5.45 Total: -6.66 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -10.35 -11.51 -21.87 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13456056.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.979 kcal (2) G-P(sol) polarization free energy of solvation -10.353 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.626 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.512 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.865 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.114 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.70 seconds