Wall clock time and date at job start Sun Mar 7 2021 01:40:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.37874 * 126.45977 * 2 1 4 4 C 1.46682 * 126.23182 * 359.96925 * 3 2 1 5 5 O 1.21700 * 119.99986 * 359.97438 * 4 3 2 6 6 N 1.34777 * 119.99981 * 180.02562 * 4 3 2 7 7 C 1.46501 * 119.99832 * 179.97438 * 6 4 3 8 8 H 1.09002 * 112.84870 * 336.19241 * 7 6 4 9 9 C 1.53782 * 113.69227 * 107.46300 * 7 6 4 10 10 C 1.53783 * 87.07840 * 89.12787 * 9 7 6 11 11 H 1.08996 * 113.69021 * 270.87209 * 10 9 7 12 12 C 1.50696 * 113.61467 * 139.98360 * 10 9 7 13 13 C 1.38193 * 119.99666 * 142.49876 * 12 10 9 14 14 C 1.38355 * 119.99215 * 179.97438 * 13 12 10 15 15 Br 1.89094 * 120.01128 * 179.72839 * 14 13 12 16 16 C 1.38306 * 119.97618 * 359.97438 * 14 13 12 17 17 C 1.38238 * 119.98985 * 0.02562 * 16 14 13 18 18 C 1.38214 * 120.01404 * 359.97438 * 17 16 14 19 19 C 1.53778 * 113.61383 * 205.00262 * 7 6 4 20 20 N 1.37649 * 107.53654 * 180.23061 * 3 2 1 21 21 C 1.35534 * 108.64393 * 359.56999 * 20 3 2 22 22 C 1.50693 * 125.56484 * 180.13822 * 21 20 3 23 23 O 1.42904 * 109.47624 * 65.32404 * 22 21 20 24 24 Si 1.86306 * 109.46997 * 185.32385 * 22 21 20 25 25 C 1.35457 * 108.87006 * 0.43569 * 21 20 3 26 26 H 1.08997 * 109.47594 * 89.99432 * 1 2 3 27 27 H 1.09001 * 109.47002 * 210.00032 * 1 2 3 28 28 H 1.09003 * 109.46966 * 329.99378 * 1 2 3 29 29 H 0.96998 * 120.00424 * 0.02562 * 6 4 3 30 30 H 1.09000 * 113.61030 * 334.58026 * 9 7 6 31 31 H 1.08997 * 113.61376 * 203.67291 * 9 7 6 32 32 H 1.07996 * 120.00651 * 359.95643 * 13 12 10 33 33 H 1.08001 * 120.00157 * 179.97438 * 16 14 13 34 34 H 1.08002 * 119.99107 * 180.02562 * 17 16 14 35 35 H 1.08001 * 119.99305 * 179.97438 * 18 17 16 36 36 H 1.09003 * 113.62028 * 156.25436 * 19 7 6 37 37 H 1.08992 * 113.61755 * 25.34501 * 19 7 6 38 38 H 0.96999 * 125.67761 * 179.70188 * 20 3 2 39 39 H 1.09003 * 109.47111 * 305.31920 * 22 21 20 40 40 H 0.96700 * 114.00109 * 179.97438 * 23 22 21 41 41 H 1.48506 * 109.99669 * 178.67645 * 24 22 21 42 42 H 1.48500 * 110.00055 * 299.99711 * 24 22 21 43 43 H 1.07994 * 126.06505 * 179.77116 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5093 -0.0006 5 8 0.7026 2.7767 -0.0017 6 7 2.8037 3.4999 -0.0011 7 6 2.3678 4.8986 -0.0023 8 1 1.3646 5.0289 -0.4082 9 6 2.5870 5.6153 1.3406 10 6 3.9835 5.9946 0.8204 11 1 4.7512 5.2548 1.0471 12 6 4.4000 7.3982 1.1775 13 6 5.7143 7.6652 1.5108 14 6 6.0967 8.9539 1.8381 15 35 7.8933 9.3185 2.3017 16 6 5.1633 9.9745 1.8312 17 6 3.8488 9.7064 1.4977 18 6 3.4672 8.4189 1.1708 19 6 3.4039 5.8662 -0.5982 20 7 3.6284 0.6625 -0.0053 21 6 3.6218 -0.6928 0.0011 22 6 4.8433 -1.5752 0.0013 23 8 5.5629 -1.3925 1.2224 24 14 4.3221 -3.3573 -0.1516 25 6 2.3379 -1.1247 0.0007 26 1 -0.3634 0.0001 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3633 0.8900 0.5139 29 1 3.7500 3.2869 -0.0014 30 1 2.6082 4.9411 2.1968 31 1 1.9296 6.4716 1.4908 32 1 6.4428 6.8680 1.5159 33 1 5.4612 10.9806 2.0871 34 1 3.1200 10.5035 1.4919 35 1 2.4401 8.2097 0.9107 36 1 2.9699 6.7912 -0.9779 37 1 4.0846 5.3947 -1.3069 38 1 4.4190 1.2244 -0.0106 39 1 5.4830 -1.3103 -0.8406 40 1 6.3630 -1.9311 1.2918 41 1 5.5192 -4.2355 -0.1847 42 1 3.4494 -3.7310 0.9904 43 1 2.0137 -2.1548 0.0015 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_13940406.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:40:27 Heat of formation + Delta-G solvation = 34.019970 kcal Electronic energy + Delta-G solvation = -26832.946164 eV Core-core repulsion = 22892.306615 eV Total energy + Delta-G solvation = -3940.639549 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -42.62312 -41.49152 -40.17001 -38.80454 -37.82594 -34.95479 -33.53902 -33.17655 -32.27481 -31.50575 -30.14284 -28.23790 -27.28127 -26.74636 -25.92444 -23.60663 -23.09739 -22.32132 -21.54046 -20.53464 -19.99099 -19.49203 -18.63900 -18.11246 -17.16519 -16.86296 -16.53246 -16.44498 -16.15475 -15.95227 -15.43515 -15.19682 -14.96351 -14.83475 -14.70082 -14.50239 -14.37789 -14.13470 -13.96799 -13.61212 -13.51474 -13.43796 -13.31584 -13.10677 -12.91703 -12.48833 -12.36232 -12.05901 -11.99451 -11.95632 -11.58395 -11.40517 -11.19984 -11.15004 -10.62555 -10.25280 -9.88260 -9.83764 -9.64198 -9.20323 -4.84532 0.06616 0.24456 0.28051 0.60815 1.20695 1.49943 1.64773 1.91175 1.99599 2.17750 2.22691 2.54440 3.25478 3.39059 3.56398 3.63465 3.76704 3.79419 3.84469 3.92008 4.05309 4.09219 4.12076 4.14470 4.25709 4.38448 4.40795 4.59505 4.62886 4.69984 4.73068 4.78149 4.81779 4.89795 4.92020 4.93505 4.97110 5.07027 5.16148 5.18927 5.32330 5.34605 5.42463 5.57195 5.63994 5.81133 5.83556 6.28453 6.44700 6.53301 7.04813 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.085 4.085 3 C -0.070 4.070 4 C 0.592 3.408 5 O -0.558 6.558 6 N -0.702 5.702 7 C 0.117 3.883 8 H 0.094 0.906 9 C -0.142 4.142 10 C -0.067 4.067 11 H 0.106 0.894 12 C -0.067 4.067 13 C -0.099 4.099 14 C -0.103 4.103 15 Br -0.061 7.061 16 C -0.108 4.108 17 C -0.113 4.113 18 C -0.104 4.104 19 C -0.122 4.122 20 N -0.514 5.514 21 C 0.074 3.926 22 C -0.065 4.065 23 O -0.561 6.561 24 Si 0.786 3.214 25 C -0.210 4.210 26 H 0.074 0.926 27 H 0.075 0.925 28 H 0.061 0.939 29 H 0.407 0.593 30 H 0.064 0.936 31 H 0.104 0.896 32 H 0.137 0.863 33 H 0.137 0.863 34 H 0.152 0.848 35 H 0.148 0.852 36 H 0.107 0.893 37 H 0.087 0.913 38 H 0.427 0.573 39 H 0.107 0.893 40 H 0.401 0.599 41 H -0.279 1.279 42 H -0.300 1.300 43 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.952 -1.336 -4.045 5.183 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.094 4.094 3 C -0.183 4.183 4 C 0.381 3.619 5 O -0.437 6.437 6 N -0.353 5.353 7 C 0.012 3.988 8 H 0.112 0.888 9 C -0.180 4.180 10 C -0.085 4.085 11 H 0.125 0.875 12 C -0.068 4.068 13 C -0.118 4.118 14 C -0.182 4.182 15 Br 0.024 6.976 16 C -0.127 4.127 17 C -0.131 4.131 18 C -0.122 4.122 19 C -0.160 4.160 20 N -0.111 5.111 21 C -0.045 4.045 22 C -0.173 4.173 23 O -0.372 6.372 24 Si 0.689 3.311 25 C -0.234 4.234 26 H 0.092 0.908 27 H 0.094 0.906 28 H 0.080 0.920 29 H 0.243 0.757 30 H 0.082 0.918 31 H 0.122 0.878 32 H 0.154 0.846 33 H 0.155 0.845 34 H 0.169 0.831 35 H 0.166 0.834 36 H 0.126 0.874 37 H 0.105 0.895 38 H 0.267 0.733 39 H 0.125 0.875 40 H 0.252 0.748 41 H -0.206 1.206 42 H -0.227 1.227 43 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 2.461 -1.206 -3.407 4.372 hybrid contribution 1.577 0.439 0.927 1.881 sum 4.038 -0.767 -2.479 4.800 Atomic orbital electron populations 1.20340 0.88962 1.02735 1.02650 1.20163 0.96433 0.91145 1.01626 1.20123 0.84354 0.93177 1.20640 1.17128 0.85619 0.83525 0.75633 1.90819 1.17457 1.83653 1.51740 1.45433 1.09479 1.05329 1.75039 1.21885 0.99740 0.79563 0.97659 0.88779 1.23580 0.96417 1.00823 0.97203 1.21598 0.97210 0.92666 0.97059 0.87543 1.19824 0.92471 0.95928 0.98583 1.21164 0.96879 0.95004 0.98791 1.21962 0.91407 0.97132 1.07694 1.96757 1.12973 1.95729 1.92118 1.21359 0.93260 0.98889 0.99220 1.21472 0.95563 0.97900 0.98207 1.21450 1.00586 0.92238 0.97974 1.23388 0.97233 0.99685 0.95676 1.41776 1.06898 1.06621 1.55848 1.20129 0.95574 0.82864 1.05906 1.24722 0.92789 1.09970 0.89868 1.86535 1.43246 1.68916 1.38476 0.93436 0.80006 0.70280 0.87355 1.20784 0.90953 0.99555 1.12154 0.90786 0.90565 0.92013 0.75661 0.91758 0.87759 0.84560 0.84464 0.83061 0.83447 0.87435 0.89453 0.73284 0.87545 0.74768 1.20574 1.22701 0.82061 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.50 9.83 71.23 0.70 0.20 16 2 C -0.08 -0.52 6.21 -19.57 -0.12 -0.64 16 3 C -0.07 -0.32 7.06 40.35 0.28 -0.04 16 4 C 0.59 3.44 7.79 86.45 0.67 4.12 16 5 O -0.56 -7.28 14.40 -4.35 -0.06 -7.35 16 6 N -0.70 1.16 5.26 -443.99 -2.34 -1.18 16 7 C 0.12 -0.28 4.32 45.52 0.20 -0.08 16 8 H 0.09 0.14 7.46 -2.39 -0.02 0.12 16 9 C -0.14 0.46 7.26 31.12 0.23 0.69 16 10 C -0.07 0.37 3.86 -11.01 -0.04 0.32 16 11 H 0.11 -0.76 8.09 -2.39 -0.02 -0.78 16 12 C -0.07 0.16 5.29 -19.87 -0.11 0.05 16 13 C -0.10 -0.01 9.45 22.29 0.21 0.20 16 14 C -0.10 -0.21 6.22 22.31 0.14 -0.08 16 15 Br -0.06 -0.19 33.70 -20.37 -0.69 -0.87 16 16 C -0.11 -0.05 9.79 22.29 0.22 0.17 16 17 C -0.11 0.26 10.05 22.26 0.22 0.49 16 18 C -0.10 0.33 8.61 22.27 0.19 0.52 16 19 C -0.12 0.80 7.29 31.12 0.23 1.02 16 20 N -0.51 0.41 5.99 -171.93 -1.03 -0.62 16 21 C 0.07 0.02 6.50 41.34 0.27 0.29 16 22 C -0.07 0.30 3.07 71.23 0.22 0.51 16 23 O -0.56 1.21 12.86 -148.98 -1.92 -0.70 16 24 Si 0.79 -3.64 30.56 68.60 2.10 -1.55 16 25 C -0.21 -0.56 9.27 22.01 0.20 -0.36 16 26 H 0.07 0.32 8.14 -2.39 -0.02 0.30 16 27 H 0.08 0.19 8.14 -2.39 -0.02 0.17 16 28 H 0.06 0.59 6.49 -2.39 -0.02 0.58 16 29 H 0.41 -2.96 7.83 -92.71 -0.73 -3.68 16 30 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 31 H 0.10 -0.47 6.31 -2.39 -0.02 -0.49 16 32 H 0.14 -0.27 8.05 -2.91 -0.02 -0.29 16 33 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 34 H 0.15 -0.99 8.06 -2.91 -0.02 -1.02 16 35 H 0.15 -1.03 6.66 -2.91 -0.02 -1.05 16 36 H 0.11 -0.78 7.72 -2.39 -0.02 -0.80 16 37 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 38 H 0.43 -2.88 8.19 -92.71 -0.76 -3.64 16 39 H 0.11 -1.06 7.96 -2.39 -0.02 -1.08 16 40 H 0.40 -4.07 8.74 -74.06 -0.65 -4.72 16 41 H -0.28 0.36 7.11 99.48 0.71 1.06 16 42 H -0.30 -1.14 7.11 99.48 0.71 -0.43 16 43 H 0.16 -0.13 6.19 -2.91 -0.02 -0.15 16 Total: 0.00 -20.48 377.22 -1.23 -21.71 By element: Atomic # 1 Polarization: -15.85 SS G_CDS: -1.01 Total: -16.86 kcal Atomic # 6 Polarization: 3.69 SS G_CDS: 3.71 Total: 7.41 kcal Atomic # 7 Polarization: 1.57 SS G_CDS: -3.37 Total: -1.79 kcal Atomic # 8 Polarization: -6.07 SS G_CDS: -1.98 Total: -8.05 kcal Atomic # 14 Polarization: -3.64 SS G_CDS: 2.10 Total: -1.55 kcal Atomic # 35 Polarization: -0.19 SS G_CDS: -0.69 Total: -0.87 kcal Total: -20.48 -1.23 -21.71 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_13940406.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.735 kcal (2) G-P(sol) polarization free energy of solvation -20.483 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.252 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.232 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.715 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.020 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds