Wall clock time and date at job start Sun Mar 7 2021 01:40:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86300 * 109.47209 * 2 1 4 4 C 1.50700 * 109.47330 * 120.00136 * 2 1 3 5 5 C 1.31113 * 118.54706 * 250.00268 * 4 2 1 6 6 N 1.38927 * 121.84612 * 180.64200 * 5 4 2 7 7 C 1.47136 * 118.81058 * 346.19809 * 6 5 4 8 8 C 1.50700 * 109.79456 * 163.52357 * 7 6 5 9 9 O 1.21275 * 119.99872 * 341.95483 * 8 7 6 10 10 N 1.34773 * 120.00051 * 161.95533 * 8 7 6 11 11 C 1.46499 * 119.99866 * 179.97438 * 10 8 7 12 12 H 1.09000 * 112.85195 * 336.19837 * 11 10 8 13 13 C 1.53782 * 113.61444 * 107.50646 * 11 10 8 14 14 C 1.53780 * 87.08211 * 89.11214 * 13 11 10 15 15 H 1.09003 * 113.69463 * 270.87659 * 14 13 11 16 16 C 1.50699 * 113.61434 * 139.97885 * 14 13 11 17 17 C 1.38220 * 119.99629 * 142.50404 * 16 14 13 18 18 C 1.38267 * 120.02222 * 180.02562 * 17 16 14 19 19 C 1.38190 * 120.00850 * 359.95482 * 18 17 16 20 20 C 1.38354 * 119.99164 * 0.02562 * 19 18 17 21 21 Br 1.89100 * 120.01006 * 180.02562 * 20 19 18 22 22 C 1.38243 * 119.99510 * 322.23319 * 16 14 13 23 23 C 1.53787 * 87.08051 * 25.43741 * 14 13 11 24 24 C 1.53538 * 107.53522 * 44.06904 * 7 6 5 25 25 C 1.50202 * 118.54267 * 69.97861 * 4 2 1 26 26 H 0.96696 * 113.99547 * 299.99733 * 1 2 3 27 27 H 1.09001 * 109.46937 * 240.00153 * 2 1 3 28 28 H 1.48502 * 110.00130 * 178.68258 * 3 2 1 29 29 H 1.48499 * 109.99978 * 300.00086 * 3 2 1 30 30 H 1.08002 * 119.07306 * 0.35352 * 5 4 2 31 31 H 0.96998 * 120.55860 * 166.42678 * 6 5 4 32 32 H 1.09003 * 110.02146 * 284.48927 * 7 6 5 33 33 H 0.97003 * 120.00007 * 0.02562 * 10 8 7 34 34 H 1.08997 * 113.61913 * 203.66703 * 13 11 10 35 35 H 1.09010 * 113.60966 * 334.57037 * 13 11 10 36 36 H 1.08004 * 119.99177 * 359.97438 * 17 16 14 37 37 H 1.07996 * 119.99370 * 179.97438 * 18 17 16 38 38 H 1.08002 * 120.00658 * 179.97438 * 19 18 17 39 39 H 1.08002 * 120.00494 * 0.02562 * 22 16 14 40 40 H 1.09000 * 113.61283 * 220.01799 * 23 14 13 41 41 H 1.08996 * 113.61721 * 89.11404 * 23 14 13 42 42 H 1.09003 * 109.62158 * 179.16258 * 24 7 6 43 43 H 1.09003 * 109.77780 * 58.69931 * 24 7 6 44 44 H 1.09004 * 109.33086 * 280.22470 * 25 4 2 45 45 H 1.08998 * 109.33730 * 39.88115 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.5116 -0.0029 2.1695 6 7 3.0115 -0.5889 3.3257 7 6 2.6222 -1.9713 3.6453 8 6 3.5602 -2.5397 4.6788 9 8 4.6366 -2.0162 4.8739 10 7 3.2028 -3.6297 5.3863 11 6 4.1150 -4.1825 6.3906 12 1 5.1570 -3.9223 6.2049 13 6 3.6635 -3.9293 7.8387 14 6 2.8825 -5.2506 7.7431 15 1 1.8667 -5.1327 7.3659 16 6 2.9480 -6.0826 8.9979 17 6 1.8373 -6.7913 9.4158 18 6 1.8966 -7.5545 10.5672 19 6 3.0667 -7.6096 11.3003 20 6 4.1788 -6.9007 10.8823 21 35 5.7805 -6.9764 11.8846 22 6 4.1205 -6.1413 9.7278 23 6 3.8936 -5.6791 6.6665 24 6 2.7170 -2.7899 2.3498 25 6 1.7448 -2.1977 1.3269 26 1 -0.3932 0.4417 0.7651 27 1 1.7923 -0.5138 -0.8900 28 1 3.5347 1.7703 0.0321 29 1 1.5615 2.4679 -1.2085 30 1 2.6077 1.0648 2.0383 31 1 3.6038 -0.0939 3.9130 32 1 1.5997 -1.9934 4.0225 33 1 2.3420 -4.0486 5.2300 34 1 4.4790 -3.9553 8.5613 35 1 3.0257 -3.0523 7.9501 36 1 0.9226 -6.7484 8.8431 37 1 1.0284 -8.1077 10.8935 38 1 3.1129 -8.2054 12.2000 39 1 4.9895 -5.5906 9.3991 40 1 3.4417 -6.2148 5.8317 41 1 4.7721 -6.1836 7.0687 42 1 2.4490 -3.8270 2.5517 43 1 3.7332 -2.7441 1.9581 44 1 0.7216 -2.4137 1.6347 45 1 1.9312 -2.6488 0.3524 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:40:37 Heat of formation + Delta-G solvation = 8.625410 kcal Electronic energy + Delta-G solvation = -27333.776113 eV Core-core repulsion = 23364.723895 eV Total energy + Delta-G solvation = -3969.052219 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.073 amu Computer time = 2.17 seconds Orbital eigenvalues (eV) -41.90847 -40.96914 -39.74179 -38.80317 -37.30309 -34.87704 -33.44575 -33.25375 -32.96887 -31.79516 -30.29633 -27.80278 -26.92567 -26.25466 -25.40491 -23.95125 -23.52351 -22.60842 -21.99113 -20.36920 -19.44928 -19.08302 -18.31677 -17.89076 -17.32336 -16.87200 -16.63673 -16.37858 -16.26318 -15.99983 -15.76449 -15.29599 -15.22172 -15.13033 -14.92467 -14.60513 -14.45650 -14.30653 -14.18017 -14.00297 -13.67911 -13.50319 -13.08340 -13.04338 -12.98705 -12.52622 -12.14474 -12.12744 -12.04874 -11.99089 -11.84214 -11.65031 -11.43485 -11.30931 -11.24989 -10.90387 -10.27083 -10.14460 -9.93554 -9.70016 -8.51418 -4.98932 0.01372 0.15968 0.61554 1.28998 1.40920 1.42568 1.67973 1.75266 2.06994 2.46109 2.54249 3.23313 3.37728 3.43365 3.51391 3.60024 3.67310 3.72654 3.76201 3.80001 3.90104 3.91794 4.01193 4.13798 4.21155 4.27842 4.31586 4.41950 4.51866 4.54127 4.54737 4.64272 4.65921 4.68915 4.77538 4.80037 4.82684 4.91989 4.94203 5.11317 5.14860 5.22031 5.23612 5.34667 5.44281 5.50691 5.70341 6.14230 6.31311 6.74059 6.78889 6.99506 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.042 4.042 3 Si 0.665 3.335 4 C -0.280 4.280 5 C 0.145 3.855 6 N -0.732 5.732 7 C 0.138 3.862 8 C 0.515 3.485 9 O -0.527 6.527 10 N -0.709 5.709 11 C 0.119 3.881 12 H 0.107 0.893 13 C -0.144 4.144 14 C -0.073 4.073 15 H 0.101 0.899 16 C -0.066 4.066 17 C -0.101 4.101 18 C -0.110 4.110 19 C -0.095 4.095 20 C -0.087 4.087 21 Br -0.049 7.049 22 C -0.089 4.089 23 C -0.136 4.136 24 C -0.128 4.128 25 C -0.051 4.051 26 H 0.375 0.625 27 H 0.104 0.896 28 H -0.260 1.260 29 H -0.258 1.258 30 H 0.134 0.866 31 H 0.410 0.590 32 H 0.093 0.907 33 H 0.403 0.597 34 H 0.096 0.904 35 H 0.077 0.923 36 H 0.129 0.871 37 H 0.133 0.867 38 H 0.133 0.867 39 H 0.133 0.867 40 H 0.079 0.921 41 H 0.099 0.901 42 H 0.078 0.922 43 H 0.075 0.925 44 H 0.070 0.930 45 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.405 -1.611 2.369 5.255 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.154 4.154 3 Si 0.568 3.432 4 C -0.290 4.290 5 C 0.025 3.975 6 N -0.366 5.366 7 C 0.029 3.971 8 C 0.301 3.699 9 O -0.402 6.402 10 N -0.360 5.360 11 C 0.014 3.986 12 H 0.125 0.875 13 C -0.182 4.182 14 C -0.091 4.091 15 H 0.120 0.880 16 C -0.067 4.067 17 C -0.119 4.119 18 C -0.129 4.129 19 C -0.115 4.115 20 C -0.167 4.167 21 Br 0.037 6.963 22 C -0.108 4.108 23 C -0.174 4.174 24 C -0.167 4.167 25 C -0.088 4.088 26 H 0.221 0.779 27 H 0.122 0.878 28 H -0.185 1.185 29 H -0.183 1.183 30 H 0.150 0.850 31 H 0.247 0.753 32 H 0.110 0.890 33 H 0.238 0.762 34 H 0.114 0.886 35 H 0.095 0.905 36 H 0.147 0.853 37 H 0.151 0.849 38 H 0.151 0.849 39 H 0.151 0.849 40 H 0.098 0.902 41 H 0.118 0.882 42 H 0.097 0.903 43 H 0.094 0.906 44 H 0.088 0.912 45 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -2.470 -1.080 1.924 3.312 hybrid contribution -0.449 -0.672 -0.133 0.819 sum -2.919 -1.752 1.791 3.847 Atomic orbital electron populations 1.86478 1.18053 1.81624 1.49100 1.24718 0.84602 1.08367 0.97758 0.95375 0.81184 0.78930 0.87705 1.20963 1.13720 0.96277 0.98022 1.20311 0.95329 0.95620 0.86266 1.44300 1.54407 1.12385 1.25467 1.20996 0.97261 0.84446 0.94443 1.20632 0.87634 0.80381 0.81275 1.90745 1.23047 1.59455 1.66946 1.45603 1.21197 1.30172 1.39067 1.21870 0.95272 0.93868 0.87624 0.87503 1.23576 1.00588 0.97177 0.96887 1.21623 0.99727 0.95098 0.92697 0.88034 1.19676 0.93142 0.97718 0.96184 1.21225 0.98252 0.96027 0.96396 1.21212 0.97717 0.98967 0.95003 1.21180 0.91824 0.98286 1.00194 1.21835 0.93386 1.03459 0.97978 1.96794 1.29736 1.98118 1.71662 1.20968 0.98506 0.98044 0.93330 1.23443 0.99956 0.95476 0.98478 1.21890 1.01893 0.98628 0.94283 1.19933 0.98510 0.91649 0.98726 0.77853 0.87844 1.18498 1.18313 0.84961 0.75321 0.88964 0.76177 0.88558 0.90468 0.85335 0.84929 0.84939 0.84907 0.90200 0.88226 0.90305 0.90587 0.91171 0.90953 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.31 12.88 -35.23 -0.45 -0.76 16 2 C -0.04 -0.01 2.81 36.01 0.10 0.10 16 3 Si 0.67 -0.33 29.72 -169.99 -5.05 -5.38 16 4 C -0.28 0.09 5.37 -101.34 -0.54 -0.45 16 5 C 0.15 -0.13 9.61 -16.08 -0.15 -0.28 16 6 N -0.73 0.43 5.47 -55.27 -0.30 0.13 16 7 C 0.14 -0.23 3.36 -68.46 -0.23 -0.46 16 8 C 0.52 -0.12 7.10 -10.99 -0.08 -0.20 16 9 O -0.53 -2.02 15.66 5.56 0.09 -1.93 16 10 N -0.71 2.01 5.26 -53.02 -0.28 1.73 16 11 C 0.12 -0.26 4.32 -67.11 -0.29 -0.55 16 12 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 13 C -0.14 0.34 7.25 -25.92 -0.19 0.15 16 14 C -0.07 0.24 3.86 -90.96 -0.35 -0.11 16 15 H 0.10 -0.46 8.09 -51.93 -0.42 -0.88 16 16 C -0.07 0.10 5.29 -104.63 -0.55 -0.45 16 17 C -0.10 0.17 9.71 -39.58 -0.38 -0.21 16 18 C -0.11 0.14 10.05 -39.59 -0.40 -0.26 16 19 C -0.10 0.02 9.79 -39.56 -0.39 -0.37 16 20 C -0.09 -0.04 6.22 -39.51 -0.25 -0.29 16 21 Br -0.05 -0.05 33.70 -68.01 -2.29 -2.34 16 22 C -0.09 0.04 8.34 -39.56 -0.33 -0.29 16 23 C -0.14 0.45 7.29 -25.91 -0.19 0.27 16 24 C -0.13 0.20 5.47 -26.43 -0.14 0.05 16 25 C -0.05 0.04 5.85 -28.10 -0.16 -0.12 16 26 H 0.37 -1.26 8.70 45.56 0.40 -0.87 16 27 H 0.10 0.11 7.96 -51.93 -0.41 -0.30 16 28 H -0.26 -0.59 7.11 56.52 0.40 -0.18 16 29 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 30 H 0.13 -0.35 4.49 -52.49 -0.24 -0.59 16 31 H 0.41 -0.12 8.08 -40.82 -0.33 -0.45 16 32 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 33 H 0.40 -2.19 8.70 -40.82 -0.36 -2.54 16 34 H 0.10 -0.20 6.32 -51.93 -0.33 -0.53 16 35 H 0.08 -0.13 8.14 -51.92 -0.42 -0.56 16 36 H 0.13 -0.46 8.05 -52.48 -0.42 -0.89 16 37 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 38 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 39 H 0.13 -0.17 6.67 -52.49 -0.35 -0.52 16 40 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 41 H 0.10 -0.29 7.71 -51.93 -0.40 -0.69 16 42 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 43 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 44 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 LS Contribution 383.97 15.07 5.79 5.79 Total: 0.00 -7.69 383.97 -13.29 -20.97 By element: Atomic # 1 Polarization: -8.47 SS G_CDS: -6.25 Total: -14.72 kcal Atomic # 6 Polarization: 1.05 SS G_CDS: -4.53 Total: -3.48 kcal Atomic # 7 Polarization: 2.44 SS G_CDS: -0.58 Total: 1.86 kcal Atomic # 8 Polarization: -2.33 SS G_CDS: -0.37 Total: -2.70 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.05 Total: -5.38 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.29 Total: -2.34 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -7.69 -13.29 -20.97 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.600 kcal (2) G-P(sol) polarization free energy of solvation -7.686 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.913 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.288 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.974 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.625 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.17 seconds